RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 EXOC3-AS1Q8N2X6 119 aa10.03□□□□□ -0.8
SFSWAP-208ENST00000539506 CACNG8Q8WXS5 425 aa10.03□□□□□ -0.8
SFSWAP-208ENST00000539506 INS-IGF2F8WCM5 200 aa10.03□□□□□ -0.8
SFSWAP-208ENST00000539506 TMEM155Q4W5P6 130 aa10.03□□□□□ -0.8
SFSWAP-208ENST00000539506 PDPNQ86YL7 162 aa10.03□□□□□ -0.8
SFSWAP-208ENST00000539506 FXYD5Q96DB9 178 aa10.03□□□□□ -0.8
SFSWAP-208ENST00000539506 HILPDAQ9Y5L2 63 aa10.03□□□□□ -0.8
SFSWAP-208ENST00000539506 TRAV8-6A0A0B4J262 113 aa10.02□□□□□ -0.8
SFSWAP-208ENST00000539506 SAP30O75446 220 aa10.02□□□□□ -0.8
SFSWAP-208ENST00000539506 NCR2O95944 276 aa10.02□□□□□ -0.8
SFSWAP-208ENST00000539506 IGHV1-8P0DP01 117 aa10.02□□□□□ -0.8
SFSWAP-208ENST00000539506 ATP5IP56385 69 aaPredicted RBP10.02□□□□□ -0.8
SFSWAP-208ENST00000539506 LRRC10Q5BKY1 277 aa10.02□□□□□ -0.8
SFSWAP-208ENST00000539506 FAM120AOSQ5T036 256 aa10.02□□□□□ -0.8
SFSWAP-208ENST00000539506 PRNTQ86SH4 94 aa10.02□□□□□ -0.8
SFSWAP-208ENST00000539506 LINC00311Q8N616 119 aa10.02□□□□□ -0.8
SFSWAP-208ENST00000539506 C22orf46C9J442 243 aa10.02□□□□□ -0.81
SFSWAP-208ENST00000539506 CHEK1O14757 476 aa10.02□□□□□ -0.81
SFSWAP-208ENST00000539506 TOMM40O96008 361 aa10.02□□□□□ -0.81
SFSWAP-208ENST00000539506 TM4SF20Q53R12 229 aa10.02□□□□□ -0.81
SFSWAP-208ENST00000539506 BVES-AS1Q5T3Y7 98 aa10.02□□□□□ -0.81
SFSWAP-208ENST00000539506 RAB37Q96AX2 223 aa10.02□□□□□ -0.81
SFSWAP-208ENST00000539506 TMEM186Q96B77 213 aa10.02□□□□□ -0.81
SFSWAP-208ENST00000539506 DAZAP1Q96EP5 407 aaKnown RBP10.02□□□□□ -0.81
SFSWAP-208ENST00000539506 CST9LQ9H4G1 147 aa10.02□□□□□ -0.81
SFSWAP-208ENST00000539506 MRPL27Q9P0M9 148 aaKnown RBP10.02□□□□□ -0.81
SFSWAP-208ENST00000539506 EPDR1Q9UM22 224 aa10.02□□□□□ -0.81
SFSWAP-208ENST00000539506 HRNRQ86YZ3 2850 aaPredicted RBP10.02□□□□□ -0.81
SFSWAP-208ENST00000539506 P01737 135 aa10.02□□□□□ -0.81
SFSWAP-208ENST00000539506 SLC25A34Q6PIV7 304 aa10.02□□□□□ -0.81
SFSWAP-208ENST00000539506 HIST1H1EP10412 219 aaKnown RBP10.01□□□□□ -0.81
SFSWAP-208ENST00000539506 HBBP68871 147 aa10.01□□□□□ -0.81
SFSWAP-208ENST00000539506 PSG9Q00887 426 aa10.01□□□□□ -0.81
SFSWAP-208ENST00000539506 C19orf24Q9BVV8 132 aa10.01□□□□□ -0.81
SFSWAP-208ENST00000539506 PRSS57Q6UWY2 283 aa10.01□□□□□ -0.81
SFSWAP-208ENST00000539506 C8orf31Q8N9H6 132 aa10.01□□□□□ -0.81
SFSWAP-208ENST00000539506 OR8A1Q8NGG7 326 aa10.01□□□□□ -0.81
SFSWAP-208ENST00000539506 CHRDL1Q9BU40 450 aa10.01□□□□□ -0.81
SFSWAP-208ENST00000539506 KAAG1Q9UBP8 84 aa10.01□□□□□ -0.81
SFSWAP-208ENST00000539506 MALRD1Q5VYJ5 2156 aa10.01□□□□□ -0.81
SFSWAP-208ENST00000539506 NBEAP1P0C6P0 100 aa10□□□□□ -0.81
SFSWAP-208ENST00000539506 OR4A5Q8NH83 315 aa10□□□□□ -0.81
SFSWAP-208ENST00000539506 C17orf77Q96MU5 243 aa10□□□□□ -0.81
SFSWAP-208ENST00000539506 SERTM2A0A1B0GWG4 89 aa10□□□□□ -0.81
SFSWAP-208ENST00000539506 TCRBV4S1A1TA0A5B7 111 aa10□□□□□ -0.81
SFSWAP-208ENST00000539506 HSBP1L1C9JCN9 74 aa10□□□□□ -0.81
SFSWAP-208ENST00000539506 COL8A1P27658 744 aa10□□□□□ -0.81
SFSWAP-208ENST00000539506 GOLT1AQ6ZVE7 132 aa10□□□□□ -0.81
SFSWAP-208ENST00000539506 SPTA1P02549 2419 aa10□□□□□ -0.81
SFSWAP-208ENST00000539506 HTR1DP28221 377 aa10□□□□□ -0.81
SFSWAP-208ENST00000539506 CDKN1BP46527 198 aa10□□□□□ -0.81
SFSWAP-208ENST00000539506 FAM71F2Q6NXP2 309 aa10□□□□□ -0.81
SFSWAP-208ENST00000539506 MRPL32Q9BYC8 188 aaKnown RBP10□□□□□ -0.81
SFSWAP-208ENST00000539506 DYNLRB1Q9NP97 96 aa10□□□□□ -0.81
SFSWAP-208ENST00000539506 SPTBN1Q01082 2364 aaKnown RBP9.99□□□□□ -0.81
SFSWAP-208ENST00000539506 K7EMI3 77 aa9.99□□□□□ -0.81
SFSWAP-208ENST00000539506 GRNP28799 593 aaKnown RBP9.99□□□□□ -0.81
SFSWAP-208ENST00000539506 NBL1P41271 181 aa9.99□□□□□ -0.81
SFSWAP-208ENST00000539506 LOXL1Q08397 574 aaPredicted RBP9.99□□□□□ -0.81
SFSWAP-208ENST00000539506 OCIAD2Q56VL3 154 aa9.99□□□□□ -0.81
SFSWAP-208ENST00000539506 THAP8Q8NA92 274 aa9.99□□□□□ -0.81
SFSWAP-208ENST00000539506 VSTM2AQ8TAG5 236 aa9.99□□□□□ -0.81
SFSWAP-208ENST00000539506 TMEM133Q9H2Q1 129 aa9.99□□□□□ -0.81
SFSWAP-208ENST00000539506 RPP21Q9H633 154 aaKnown RBP9.99□□□□□ -0.81
SFSWAP-208ENST00000539506 LYZP61626 148 aa9.99□□□□□ -0.81
SFSWAP-208ENST00000539506 ARF6P62330 175 aa9.99□□□□□ -0.81
SFSWAP-208ENST00000539506 AKAP6Q13023 2319 aa9.99□□□□□ -0.81
SFSWAP-208ENST00000539506 COX19Q49B96 90 aa9.99□□□□□ -0.81
SFSWAP-208ENST00000539506 SRSF12Q8WXF0 261 aaKnown RBP9.98□□□□□ -0.81
SFSWAP-208ENST00000539506 ARHGAP32A7KAX9 2087 aa9.98□□□□□ -0.81
SFSWAP-208ENST00000539506 ZFHX3Q15911 3703 aa9.98□□□□□ -0.81
SFSWAP-208ENST00000539506 GAGE12BA1L429 117 aa9.98□□□□□ -0.81
SFSWAP-208ENST00000539506 APOHP02749 345 aaPredicted RBP9.98□□□□□ -0.81
SFSWAP-208ENST00000539506 CRYGBP07316 175 aa9.98□□□□□ -0.81
SFSWAP-208ENST00000539506 ARMS2P0C7Q2 107 aa9.98□□□□□ -0.81
SFSWAP-208ENST00000539506 LINC01560Q8TB33 94 aa9.98□□□□□ -0.81
SFSWAP-208ENST00000539506 GPR82Q96P67 336 aa9.98□□□□□ -0.81
SFSWAP-208ENST00000539506 Q9H3A6 140 aa9.98□□□□□ -0.81
SFSWAP-208ENST00000539506 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.98□□□□□ -0.81
SFSWAP-208ENST00000539506 K7EP13 123 aa9.98□□□□□ -0.81
SFSWAP-208ENST00000539506 IGLV1-47P01700 117 aa9.98□□□□□ -0.81
SFSWAP-208ENST00000539506 CRYGCP07315 174 aa9.98□□□□□ -0.81
SFSWAP-208ENST00000539506 KLF5Q13887 457 aaPredicted RBP9.98□□□□□ -0.81
SFSWAP-208ENST00000539506 ASCL5Q7RTU5 278 aa9.98□□□□□ -0.81
SFSWAP-208ENST00000539506 C7orf69Q9H7B7 122 aa9.98□□□□□ -0.81
SFSWAP-208ENST00000539506 PTPRQQ9UMZ3 2332 aa9.97□□□□□ -0.81
SFSWAP-208ENST00000539506 TRAV30A0A087WSZ9 112 aa9.97□□□□□ -0.81
SFSWAP-208ENST00000539506 GOSR1O95249 250 aa9.97□□□□□ -0.81
SFSWAP-208ENST00000539506 MYCNOSP40205 109 aa9.97□□□□□ -0.81
SFSWAP-208ENST00000539506 PVRIGQ6DKI7 326 aa9.97□□□□□ -0.81
SFSWAP-208ENST00000539506 MAP1LC3CQ9BXW4 147 aa9.97□□□□□ -0.81
SFSWAP-208ENST00000539506 F11RQ9Y624 299 aaKnown RBP9.97□□□□□ -0.81
SFSWAP-208ENST00000539506 A0A1B0GXF2 115 aa9.97□□□□□ -0.81
SFSWAP-208ENST00000539506 VMA21Q3ZAQ7 101 aa9.97□□□□□ -0.81
SFSWAP-208ENST00000539506 TMEM191AQ9H0A3 160 aa9.97□□□□□ -0.81
SFSWAP-208ENST00000539506 A8MWL6 223 aa9.96□□□□□ -0.81
SFSWAP-208ENST00000539506 APOBEC3AP31941 199 aaPredicted RBP9.96□□□□□ -0.81
SFSWAP-208ENST00000539506 MEGF9Q9H1U4 602 aa9.96□□□□□ -0.81
SFSWAP-208ENST00000539506 FAM231BA6NCW3 169 aa9.96□□□□□ -0.82
SFSWAP-208ENST00000539506 RBP4P02753 201 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms