RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 NUDT10Q8NFP7 164 aa7.29□□□□□ -1.24
DDB1-211ENST00000538280 IGFBPL1Q8WX77 278 aa7.29□□□□□ -1.24
DDB1-211ENST00000538280 FAM168AQ92567 244 aa7.29□□□□□ -1.24
DDB1-211ENST00000538280 NUDT11Q96G61 164 aa7.29□□□□□ -1.24
DDB1-211ENST00000538280 FMC1Q96HJ9 113 aa7.29□□□□□ -1.24
DDB1-211ENST00000538280 GPR82Q96P67 336 aa7.29□□□□□ -1.24
DDB1-211ENST00000538280 RBM14Q96PK6 669 aaKnown RBP7.29□□□□□ -1.24
DDB1-211ENST00000538280 SHANK2-AS3Q9BTD1 123 aa7.29□□□□□ -1.24
DDB1-211ENST00000538280 SLC25A39Q9BZJ4 359 aaPredicted RBP7.29□□□□□ -1.24
DDB1-211ENST00000538280 PRSS22Q9GZN4 317 aa7.29□□□□□ -1.24
DDB1-211ENST00000538280 Q9H3A6 140 aa7.29□□□□□ -1.24
DDB1-211ENST00000538280 OTORQ9NRC9 128 aa7.29□□□□□ -1.24
DDB1-211ENST00000538280 KLK9Q9UKQ9 250 aa7.29□□□□□ -1.24
DDB1-211ENST00000538280 MALRD1Q5VYJ5 2156 aa7.28□□□□□ -1.24
DDB1-211ENST00000538280 TRAV34A0A0B4J273 112 aa7.28□□□□□ -1.24
DDB1-211ENST00000538280 A0A1B0GXF2 115 aa7.28□□□□□ -1.24
DDB1-211ENST00000538280 TSTD3H0UI37 97 aa7.28□□□□□ -1.24
DDB1-211ENST00000538280 BMPR1BO00238 502 aa7.28□□□□□ -1.24
DDB1-211ENST00000538280 SERF1AO75920 110 aa7.28□□□□□ -1.24
DDB1-211ENST00000538280 TPPP2P59282 170 aa7.28□□□□□ -1.24
DDB1-211ENST00000538280 UBE2G1P62253 170 aa7.28□□□□□ -1.24
DDB1-211ENST00000538280 RANP62826 216 aaKnown RBP7.28□□□□□ -1.24
DDB1-211ENST00000538280 PLGLAQ15195 96 aa7.28□□□□□ -1.24
DDB1-211ENST00000538280 IQCJQ1A5X6 159 aa7.28□□□□□ -1.24
DDB1-211ENST00000538280 C16orf54Q6UWD8 224 aa7.28□□□□□ -1.24
DDB1-211ENST00000538280 VMO1Q7Z5L0 202 aa7.28□□□□□ -1.24
DDB1-211ENST00000538280 DYNAPQ8N1N2 210 aa7.28□□□□□ -1.24
DDB1-211ENST00000538280 ZNF664Q8N3J9 261 aa7.28□□□□□ -1.24
DDB1-211ENST00000538280 TTC9CQ8N5M4 171 aa7.28□□□□□ -1.24
DDB1-211ENST00000538280 NHLRC2Q8NBF2 726 aa7.28□□□□□ -1.24
DDB1-211ENST00000538280 TSKUQ8WUA8 353 aa7.28□□□□□ -1.24
DDB1-211ENST00000538280 TMEM68Q96MH6 324 aa7.28□□□□□ -1.24
DDB1-211ENST00000538280 NOL4LQ96MY1 436 aaPredicted RBP7.28□□□□□ -1.24
DDB1-211ENST00000538280 FANCD2OSQ96PS1 177 aa7.28□□□□□ -1.24
DDB1-211ENST00000538280 RASL11BQ9BPW5 248 aa7.28□□□□□ -1.24
DDB1-211ENST00000538280 ZNF586Q9NXT0 402 aa7.28□□□□□ -1.24
DDB1-211ENST00000538280 TBL2Q9Y4P3 447 aaKnown RBP7.28□□□□□ -1.24
DDB1-211ENST00000538280 FBN1P35555 2871 aaKnown RBP7.28□□□□□ -1.24
DDB1-211ENST00000538280 TRAV30A0A087WSZ9 112 aa7.27□□□□□ -1.25
DDB1-211ENST00000538280 KIR2DL5BA0A0G2JN68 375 aa7.27□□□□□ -1.25
DDB1-211ENST00000538280 KIR2DL5BA0A0G2JPC4 375 aa7.27□□□□□ -1.25
DDB1-211ENST00000538280 NPIPB6E9PJ23 425 aa7.27□□□□□ -1.25
DDB1-211ENST00000538280 F2Z2F3 143 aa7.27□□□□□ -1.25
DDB1-211ENST00000538280 OR2J3O76001 311 aa7.27□□□□□ -1.25
DDB1-211ENST00000538280 RD3LP0DJH9 198 aa7.27□□□□□ -1.25
DDB1-211ENST00000538280 IGLC2P0DOY2 106 aa7.27□□□□□ -1.25
DDB1-211ENST00000538280 DDTP30046 118 aa7.27□□□□□ -1.25
DDB1-211ENST00000538280 TCL1AP56279 114 aa7.27□□□□□ -1.25
DDB1-211ENST00000538280 LYZP61626 148 aa7.27□□□□□ -1.25
DDB1-211ENST00000538280 NDPQ00604 133 aa7.27□□□□□ -1.25
DDB1-211ENST00000538280 USF2Q15853 346 aaPredicted RBP7.27□□□□□ -1.25
DDB1-211ENST00000538280 ZNF562Q6V9R5 426 aa7.27□□□□□ -1.25
DDB1-211ENST00000538280 ATP5L2Q7Z4Y8 100 aa7.27□□□□□ -1.25
DDB1-211ENST00000538280 Q86TA4 180 aa7.27□□□□□ -1.25
DDB1-211ENST00000538280 KIR2DL5AQ8N109 375 aa7.27□□□□□ -1.25
DDB1-211ENST00000538280 ZNF491Q8N8L2 437 aa7.27□□□□□ -1.25
DDB1-211ENST00000538280 NUP35Q8NFH5 326 aa7.27□□□□□ -1.25
DDB1-211ENST00000538280 BLNKQ8WV28 456 aa7.27□□□□□ -1.25
DDB1-211ENST00000538280 C14orf144Q96I85 54 aa7.27□□□□□ -1.25
DDB1-211ENST00000538280 MS4A10Q96PG2 267 aa7.27□□□□□ -1.25
DDB1-211ENST00000538280 GNB4Q9HAV0 340 aa7.27□□□□□ -1.25
DDB1-211ENST00000538280 NAT8BQ9UHF3 227 aa7.27□□□□□ -1.25
DDB1-211ENST00000538280 HILPDAQ9Y5L2 63 aa7.27□□□□□ -1.25
DDB1-211ENST00000538280 ZANQ9Y493 2812 aa7.27□□□□□ -1.25
DDB1-211ENST00000538280 TRBV19A0A075B6N1 114 aa7.26□□□□□ -1.25
DDB1-211ENST00000538280 IGHV2-70DA0A0C4DH43 119 aa7.26□□□□□ -1.25
DDB1-211ENST00000538280 A8MWP6 167 aa7.26□□□□□ -1.25
DDB1-211ENST00000538280 F8W735 103 aaPredicted RBP7.26□□□□□ -1.25
DDB1-211ENST00000538280 CNIH1O95406 144 aa7.26□□□□□ -1.25
DDB1-211ENST00000538280 CA1P00915 261 aaPredicted RBP7.26□□□□□ -1.25
DDB1-211ENST00000538280 IGLV2-11P01706 119 aa7.26□□□□□ -1.25
DDB1-211ENST00000538280 ZFP36P26651 326 aaKnown RBP7.26□□□□□ -1.25
DDB1-211ENST00000538280 DEFA6Q01524 100 aa7.26□□□□□ -1.25
DDB1-211ENST00000538280 KLF5Q13887 457 aaPredicted RBP7.26□□□□□ -1.25
DDB1-211ENST00000538280 GDF5OSQ5U4N7 250 aa7.26□□□□□ -1.25
DDB1-211ENST00000538280 MRPL54Q6P161 138 aaKnown RBP7.26□□□□□ -1.25
DDB1-211ENST00000538280 LINC00322Q6ZN03 302 aaPredicted RBP7.26□□□□□ -1.25
DDB1-211ENST00000538280 Q6ZWC4 215 aa7.26□□□□□ -1.25
DDB1-211ENST00000538280 LYPD1Q8N2G4 141 aa7.26□□□□□ -1.25
DDB1-211ENST00000538280 CIARTQ8N365 385 aaPredicted RBP7.26□□□□□ -1.25
DDB1-211ENST00000538280 ARPC1AQ92747 370 aa7.26□□□□□ -1.25
DDB1-211ENST00000538280 RNF125Q96EQ8 232 aa7.26□□□□□ -1.25
DDB1-211ENST00000538280 AJUBAQ96IF1 538 aa7.26□□□□□ -1.25
DDB1-211ENST00000538280 GFRA4Q9GZZ7 299 aa7.26□□□□□ -1.25
DDB1-211ENST00000538280 PRO1933Q9H354 126 aa7.26□□□□□ -1.25
DDB1-211ENST00000538280 RPP21Q9H633 154 aaKnown RBP7.26□□□□□ -1.25
DDB1-211ENST00000538280 ZNF331Q9NQX6 463 aaPredicted RBP7.26□□□□□ -1.25
DDB1-211ENST00000538280 SERTAD4Q9NUC0 356 aa7.26□□□□□ -1.25
DDB1-211ENST00000538280 NAGKQ9UJ70 344 aa7.26□□□□□ -1.25
DDB1-211ENST00000538280 RNF24Q9Y225 148 aa7.26□□□□□ -1.25
DDB1-211ENST00000538280 SOX21Q9Y651 276 aaPredicted RBP7.26□□□□□ -1.25
DDB1-211ENST00000538280 FAM231BA6NCW3 169 aa7.25□□□□□ -1.25
DDB1-211ENST00000538280 VWC2LB2RUY7 222 aa7.25□□□□□ -1.25
DDB1-211ENST00000538280 OVOL3O00110 214 aa7.25□□□□□ -1.25
DDB1-211ENST00000538280 APCSP02743 223 aa7.25□□□□□ -1.25
DDB1-211ENST00000538280 FCGR2BP31994 310 aaPredicted RBP7.25□□□□□ -1.25
DDB1-211ENST00000538280 BRS3P32247 399 aa7.25□□□□□ -1.25
DDB1-211ENST00000538280 CDKN1AP38936 164 aa7.25□□□□□ -1.25
DDB1-211ENST00000538280 EFNA4P52798 201 aa7.25□□□□□ -1.25
DDB1-211ENST00000538280 MFAP4P55083 255 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms