RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	IGHV3-73	A0A0B4J1V6	119 aa		12.75	□□□□□ -0.37
NCAPD3-213	ENST00000534532	IGKV1-16	P04430	117 aa		12.75	□□□□□ -0.37
NCAPD3-213	ENST00000534532	KLF2	Q9Y5W3	355 aa	Predicted RBP	12.75	□□□□□ -0.37
NCAPD3-213	ENST00000534532	FER1L5	A0AVI2	2057 aa		12.75	□□□□□ -0.37
NCAPD3-213	ENST00000534532	LMO1	P25800	156 aa		12.75	□□□□□ -0.37
NCAPD3-213	ENST00000534532	OCC1	Q8TAD7	63 aa		12.75	□□□□□ -0.37
NCAPD3-213	ENST00000534532	MRPL16	Q9NX20	251 aa	Known RBP	12.75	□□□□□ -0.37
NCAPD3-213	ENST00000534532	DEFB113	Q30KQ7	82 aa		12.74	□□□□□ -0.37
NCAPD3-213	ENST00000534532	C1orf122	Q6ZSJ8	110 aa		12.74	□□□□□ -0.37
NCAPD3-213	ENST00000534532	DMRTC2	Q8IXT2	367 aa	Predicted RBP	12.74	□□□□□ -0.37
NCAPD3-213	ENST00000534532	OR5A1	Q8NGJ0	315 aa		12.74	□□□□□ -0.37
NCAPD3-213	ENST00000534532	MGST2	Q99735	147 aa		12.74	□□□□□ -0.37
NCAPD3-213	ENST00000534532		K7ERU9	68 aa		12.74	□□□□□ -0.37
NCAPD3-213	ENST00000534532	RNASE2	P10153	161 aa	Known RBP	12.74	□□□□□ -0.37
NCAPD3-213	ENST00000534532	PSG3	Q16557	428 aa		12.74	□□□□□ -0.37
NCAPD3-213	ENST00000534532	SSBP4	Q9BWG4	385 aa	Predicted RBP	12.74	□□□□□ -0.37
NCAPD3-213	ENST00000534532	FAM208B	Q5VWN6	2430 aa		12.74	□□□□□ -0.37
NCAPD3-213	ENST00000534532	LOX	P28300	417 aa	Predicted RBP	12.74	□□□□□ -0.37
NCAPD3-213	ENST00000534532		Q6ZR03	302 aa		12.74	□□□□□ -0.37
NCAPD3-213	ENST00000534532	APOC4	P55056	127 aa		12.74	□□□□□ -0.37
NCAPD3-213	ENST00000534532	LINC00469	Q8N7U9	141 aa		12.74	□□□□□ -0.37
NCAPD3-213	ENST00000534532	PRB1	P04280	392 aa		12.73	□□□□□ -0.37
NCAPD3-213	ENST00000534532	IGLV3-9	A0A075B6K5	115 aa		12.73	□□□□□ -0.37
NCAPD3-213	ENST00000534532	TEX36	Q5VZQ5	186 aa		12.73	□□□□□ -0.37
NCAPD3-213	ENST00000534532	MST1L	Q2TV78	715 aa		12.73	□□□□□ -0.37
NCAPD3-213	ENST00000534532	PGPEP1	Q9NXJ5	209 aa		12.73	□□□□□ -0.37
NCAPD3-213	ENST00000534532	ZSWIM8	A7E2V4	1837 aa		12.73	□□□□□ -0.37
NCAPD3-213	ENST00000534532	ZNF407	Q9C0G0	2248 aa		12.73	□□□□□ -0.37
NCAPD3-213	ENST00000534532	EVI2A	P22794	236 aa		12.72	□□□□□ -0.37
NCAPD3-213	ENST00000534532	SPATA31B1P	Q5VZV4	182 aa		12.72	□□□□□ -0.37
NCAPD3-213	ENST00000534532	NDUFB8	O95169	186 aa		12.72	□□□□□ -0.37
NCAPD3-213	ENST00000534532	DAD1	P61803	113 aa		12.72	□□□□□ -0.37
NCAPD3-213	ENST00000534532	ATP5L2	Q7Z4Y8	100 aa		12.72	□□□□□ -0.37
NCAPD3-213	ENST00000534532	ANK1	P16157	1881 aa		12.72	□□□□□ -0.37
NCAPD3-213	ENST00000534532	PLXNA3	P51805	1871 aa		12.72	□□□□□ -0.37
NCAPD3-213	ENST00000534532	PCNX1	Q96RV3	2341 aa		12.72	□□□□□ -0.37
NCAPD3-213	ENST00000534532	WFDC1	Q9HC57	220 aa		12.72	□□□□□ -0.37
NCAPD3-213	ENST00000534532		A0A1W2PPI3	338 aa		12.72	□□□□□ -0.37
NCAPD3-213	ENST00000534532	ZNF815P	A8K554	130 aa		12.72	□□□□□ -0.37
NCAPD3-213	ENST00000534532	PLP1	P60201	277 aa		12.72	□□□□□ -0.37
NCAPD3-213	ENST00000534532	SEC11A	P67812	179 aa		12.72	□□□□□ -0.37
NCAPD3-213	ENST00000534532	QRFP	P83859	136 aa		12.72	□□□□□ -0.37
NCAPD3-213	ENST00000534532	MORN3	Q6PF18	240 aa	Predicted RBP	12.72	□□□□□ -0.37
NCAPD3-213	ENST00000534532	IL17REL	Q6ZVW7	336 aa		12.72	□□□□□ -0.37
NCAPD3-213	ENST00000534532	FNDC10	F2Z333	226 aa		12.71	□□□□□ -0.37
NCAPD3-213	ENST00000534532	ELANE	P08246	267 aa		12.71	□□□□□ -0.37
NCAPD3-213	ENST00000534532	VSIR	Q9H7M9	311 aa		12.71	□□□□□ -0.37
NCAPD3-213	ENST00000534532	FGF16	O43320	207 aa		12.71	□□□□□ -0.37
NCAPD3-213	ENST00000534532	RNF144B	Q7Z419	303 aa		12.71	□□□□□ -0.37
NCAPD3-213	ENST00000534532	LINC00587	B1AMM8	73 aa		12.71	□□□□□ -0.38
NCAPD3-213	ENST00000534532	C5orf24	Q7Z6I8	188 aa		12.71	□□□□□ -0.38
NCAPD3-213	ENST00000534532	HOXA3	O43365	443 aa	Predicted RBP	12.71	□□□□□ -0.38
NCAPD3-213	ENST00000534532		G3V318	75 aa		12.7	□□□□□ -0.38
NCAPD3-213	ENST00000534532	PRB4	P10163	310 aa	Predicted RBP	12.7	□□□□□ -0.38
NCAPD3-213	ENST00000534532	WT1	P19544	449 aa	Predicted RBP	12.7	□□□□□ -0.38
NCAPD3-213	ENST00000534532	LINC00158	P58513	81 aa		12.7	□□□□□ -0.38
NCAPD3-213	ENST00000534532	ZMAT4	Q9H898	229 aa		12.7	□□□□□ -0.38
NCAPD3-213	ENST00000534532	DPM2	O94777	84 aa		12.7	□□□□□ -0.38
NCAPD3-213	ENST00000534532	PLN	P26678	52 aa		12.7	□□□□□ -0.38
NCAPD3-213	ENST00000534532	LINC00205	P59089	165 aa		12.7	□□□□□ -0.38
NCAPD3-213	ENST00000534532	LINC00311	Q8N616	119 aa		12.7	□□□□□ -0.38
NCAPD3-213	ENST00000534532	XCL2	Q9UBD3	114 aa		12.7	□□□□□ -0.38
NCAPD3-213	ENST00000534532		F5H768	121 aa		12.7	□□□□□ -0.38
NCAPD3-213	ENST00000534532	LINC00614	P0C842	121 aa		12.7	□□□□□ -0.38
NCAPD3-213	ENST00000534532	TMEM249	Q2WGJ8	235 aa		12.7	□□□□□ -0.38
NCAPD3-213	ENST00000534532	IGFL2	Q6UWQ7	119 aa		12.7	□□□□□ -0.38
NCAPD3-213	ENST00000534532		Q8TAT8	98 aa		12.7	□□□□□ -0.38
NCAPD3-213	ENST00000534532	SHANK2-AS3	Q9BTD1	123 aa		12.7	□□□□□ -0.38
NCAPD3-213	ENST00000534532	CHTOP	Q9Y3Y2	248 aa	Known RBP	12.7	□□□□□ -0.38
NCAPD3-213	ENST00000534532	S100A7L2	Q5SY68	101 aa		12.7	□□□□□ -0.38
NCAPD3-213	ENST00000534532	FAM19A2	Q8N3H0	131 aa		12.7	□□□□□ -0.38
NCAPD3-213	ENST00000534532	AGMAT	Q9BSE5	352 aa		12.7	□□□□□ -0.38
NCAPD3-213	ENST00000534532	APOM	O95445	188 aa		12.69	□□□□□ -0.38
NCAPD3-213	ENST00000534532	NTF4	P34130	210 aa		12.69	□□□□□ -0.38
NCAPD3-213	ENST00000534532	PDE6H	Q13956	83 aa		12.69	□□□□□ -0.38
NCAPD3-213	ENST00000534532	FAM90A2P	Q658T7	463 aa		12.69	□□□□□ -0.38
NCAPD3-213	ENST00000534532	VCY	O14598	125 aa		12.69	□□□□□ -0.38
NCAPD3-213	ENST00000534532	YPEL3	P61236	119 aa	Predicted RBP	12.69	□□□□□ -0.38
NCAPD3-213	ENST00000534532	NOTCH3	Q9UM47	2321 aa		12.69	□□□□□ -0.38
NCAPD3-213	ENST00000534532	PGPEP1L	A6NFU8	196 aa		12.69	□□□□□ -0.38
NCAPD3-213	ENST00000534532	TCTEX1D4	Q5JR98	221 aa		12.69	□□□□□ -0.38
NCAPD3-213	ENST00000534532	IGFL4	Q6B9Z1	124 aa		12.69	□□□□□ -0.38
NCAPD3-213	ENST00000534532	ZNRD1	Q9P1U0	126 aa		12.69	□□□□□ -0.38
NCAPD3-213	ENST00000534532	SH2D1A	O60880	128 aa		12.68	□□□□□ -0.38
NCAPD3-213	ENST00000534532	TDGF1P3	P51864	188 aa		12.68	□□□□□ -0.38
NCAPD3-213	ENST00000534532	LAGE3	Q14657	143 aa		12.68	□□□□□ -0.38
NCAPD3-213	ENST00000534532	ZNF833P	Q6ZTB9	187 aa		12.68	□□□□□ -0.38
NCAPD3-213	ENST00000534532	ZNF581	Q9P0T4	197 aa		12.68	□□□□□ -0.38
NCAPD3-213	ENST00000534532	PCNX2	A6NKB5	2137 aa		12.68	□□□□□ -0.38
NCAPD3-213	ENST00000534532	MPDZ	O75970	2070 aa		12.68	□□□□□ -0.38
NCAPD3-213	ENST00000534532	C15orf62	A8K5M9	175 aa		12.68	□□□□□ -0.38
NCAPD3-213	ENST00000534532	PTPRQ	Q9UMZ3	2332 aa		12.68	□□□□□ -0.38
NCAPD3-213	ENST00000534532	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	12.68	□□□□□ -0.38
NCAPD3-213	ENST00000534532		K7EM74	188 aa		12.68	□□□□□ -0.38
NCAPD3-213	ENST00000534532	KAAG1	Q9UBP8	84 aa		12.68	□□□□□ -0.38
NCAPD3-213	ENST00000534532	IFITM2	Q01629	132 aa		12.68	□□□□□ -0.38
NCAPD3-213	ENST00000534532	LINC01559	Q495D7	138 aa		12.68	□□□□□ -0.38
NCAPD3-213	ENST00000534532	LYZL1	Q6UWQ5	148 aa		12.68	□□□□□ -0.38
NCAPD3-213	ENST00000534532	ERCC8	Q13216	396 aa		12.67	□□□□□ -0.38
NCAPD3-213	ENST00000534532	JPT2	Q9H910	190 aa		12.67	□□□□□ -0.38

Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms