RNA–Protein interactions for RNA: ENST00000514096.5

LIMCH1-219, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 3,543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-219ENST00000514096 RNF152Q8N8N0 203 aa6.33□□□□□ -1.4
LIMCH1-219ENST00000514096 OR4C12Q96R67 309 aa6.33□□□□□ -1.4
LIMCH1-219ENST00000514096 IGHV2-26A0A0B4J1V2 119 aa6.33□□□□□ -1.4
LIMCH1-219ENST00000514096 A0A0G2JLM5 398 aa6.33□□□□□ -1.4
LIMCH1-219ENST00000514096 PRSS29PA6NIE9 313 aa6.33□□□□□ -1.4
LIMCH1-219ENST00000514096 ZNF737O75373 536 aa6.33□□□□□ -1.4
LIMCH1-219ENST00000514096 TSPAN13O95857 204 aa6.33□□□□□ -1.4
LIMCH1-219ENST00000514096 SRP19P09132 144 aaKnown RBP6.33□□□□□ -1.4
LIMCH1-219ENST00000514096 AADACP22760 399 aa6.33□□□□□ -1.4
LIMCH1-219ENST00000514096 RHOGP84095 191 aa6.33□□□□□ -1.4
LIMCH1-219ENST00000514096 IL13RA2Q14627 380 aa6.33□□□□□ -1.4
LIMCH1-219ENST00000514096 DRAM1Q8N682 238 aa6.33□□□□□ -1.4
LIMCH1-219ENST00000514096 C1orf147Q96MC9 270 aaPredicted RBP6.33□□□□□ -1.4
LIMCH1-219ENST00000514096 PMCHL2Q9BQD1 86 aa6.33□□□□□ -1.4
LIMCH1-219ENST00000514096 NPFFR1Q9GZQ6 430 aa6.33□□□□□ -1.4
LIMCH1-219ENST00000514096 A0A0U1RQV1 116 aa6.33□□□□□ -1.4
LIMCH1-219ENST00000514096 SLC35B1P78383 322 aa6.33□□□□□ -1.4
LIMCH1-219ENST00000514096 ZNF585BQ52M93 769 aa6.33□□□□□ -1.4
LIMCH1-219ENST00000514096 SSMEM1Q8WWF3 244 aa6.33□□□□□ -1.4
LIMCH1-219ENST00000514096 YPEL4Q96NS1 127 aa6.33□□□□□ -1.4
LIMCH1-219ENST00000514096 CLEC7AQ9BXN2 247 aa6.33□□□□□ -1.4
LIMCH1-219ENST00000514096 RNF114Q9Y508 228 aa6.33□□□□□ -1.4
LIMCH1-219ENST00000514096 SPINT2O43291 252 aa6.32□□□□□ -1.4
LIMCH1-219ENST00000514096 IGKV1D-33P01593 117 aa6.32□□□□□ -1.4
LIMCH1-219ENST00000514096 IGKV1-33P01594 117 aa6.32□□□□□ -1.4
LIMCH1-219ENST00000514096 HBZP02008 142 aa6.32□□□□□ -1.4
LIMCH1-219ENST00000514096 SCTP09683 121 aa6.32□□□□□ -1.4
LIMCH1-219ENST00000514096 GNG4P50150 75 aa6.32□□□□□ -1.4
LIMCH1-219ENST00000514096 TAS2R46P59540 309 aa6.32□□□□□ -1.4
LIMCH1-219ENST00000514096 SFTA2Q6UW10 78 aa6.32□□□□□ -1.4
LIMCH1-219ENST00000514096 CENPVQ7Z7K6 275 aaPredicted RBP6.32□□□□□ -1.4
LIMCH1-219ENST00000514096 OR1L4Q8NGR5 311 aa6.32□□□□□ -1.4
LIMCH1-219ENST00000514096 CFHR4Q92496 578 aa6.32□□□□□ -1.4
LIMCH1-219ENST00000514096 ARPC1AQ92747 370 aa6.32□□□□□ -1.4
LIMCH1-219ENST00000514096 C20orf78Q9BR46 151 aa6.32□□□□□ -1.4
LIMCH1-219ENST00000514096 SIRPDQ9H106 197 aa6.32□□□□□ -1.4
LIMCH1-219ENST00000514096 ERG28Q9UKR5 140 aa6.32□□□□□ -1.4
LIMCH1-219ENST00000514096 IGSF23A1L1A6 192 aa6.32□□□□□ -1.4
LIMCH1-219ENST00000514096 A6NDN8 102 aa6.32□□□□□ -1.4
LIMCH1-219ENST00000514096 TIMM23O14925 209 aa6.32□□□□□ -1.4
LIMCH1-219ENST00000514096 CCL1P22362 96 aa6.32□□□□□ -1.4
LIMCH1-219ENST00000514096 ATP6V0CP27449 155 aa6.32□□□□□ -1.4
LIMCH1-219ENST00000514096 G6PCP35575 357 aa6.32□□□□□ -1.4
LIMCH1-219ENST00000514096 GAGE2BQ13066 116 aa6.32□□□□□ -1.4
LIMCH1-219ENST00000514096 HLA-DRB5Q30154 266 aa6.32□□□□□ -1.4
LIMCH1-219ENST00000514096 GAGE2EQ4V326 116 aa6.32□□□□□ -1.4
LIMCH1-219ENST00000514096 RPL39P5Q59GN2 51 aa6.32□□□□□ -1.4
LIMCH1-219ENST00000514096 SLC25A30Q5SVS4 291 aa6.32□□□□□ -1.4
LIMCH1-219ENST00000514096 C8orf86Q6ZUL3 223 aa6.32□□□□□ -1.4
LIMCH1-219ENST00000514096 BPIFA4PQ86YQ2 179 aa6.32□□□□□ -1.4
LIMCH1-219ENST00000514096 Q8IYB0 196 aa6.32□□□□□ -1.4
LIMCH1-219ENST00000514096 GAGE2DQ9UEU5 116 aa6.32□□□□□ -1.4
LIMCH1-219ENST00000514096 MRPS16Q9Y3D3 137 aaKnown RBP6.32□□□□□ -1.4
LIMCH1-219ENST00000514096 A0A1W2PRE2 83 aa6.32□□□□□ -1.4
LIMCH1-219ENST00000514096 TMEM30CPA0ZSE6 113 aa6.32□□□□□ -1.4
LIMCH1-219ENST00000514096 C12orf77C9JDV5 145 aa6.32□□□□□ -1.4
LIMCH1-219ENST00000514096 KIR2DS4P43632 304 aa6.32□□□□□ -1.4
LIMCH1-219ENST00000514096 HILS1P60008 231 aa6.32□□□□□ -1.4
LIMCH1-219ENST00000514096 C10orf126Q8N4M7 172 aa6.32□□□□□ -1.4
LIMCH1-219ENST00000514096 OR2T6Q8NHC8 308 aa6.32□□□□□ -1.4
LIMCH1-219ENST00000514096 TMEM133Q9H2Q1 129 aa6.32□□□□□ -1.4
LIMCH1-219ENST00000514096 RETNQ9HD89 108 aa6.32□□□□□ -1.4
LIMCH1-219ENST00000514096 RPL7P18124 248 aaKnown RBP6.31□□□□□ -1.4
LIMCH1-219ENST00000514096 CSN1S1P47710 185 aa6.31□□□□□ -1.4
LIMCH1-219ENST00000514096 WFDC2Q14508 124 aa6.31□□□□□ -1.4
LIMCH1-219ENST00000514096 TCF24Q7RTU0 167 aa6.31□□□□□ -1.4
LIMCH1-219ENST00000514096 GVQW1Q8N7I0 195 aa6.31□□□□□ -1.4
LIMCH1-219ENST00000514096 RNF126Q9BV68 326 aa6.31□□□□□ -1.4
LIMCH1-219ENST00000514096 MTFP1Q9UDX5 166 aa6.31□□□□□ -1.4
LIMCH1-219ENST00000514096 NAT8BQ9UHF3 227 aa6.31□□□□□ -1.4
LIMCH1-219ENST00000514096 VSIG4Q9Y279 399 aa6.31□□□□□ -1.4
LIMCH1-219ENST00000514096 A0A087WWC5 75 aa6.31□□□□□ -1.4
LIMCH1-219ENST00000514096 hDV102S1A0JD36 115 aa6.31□□□□□ -1.4
LIMCH1-219ENST00000514096 IFITM5A6NNB3 132 aa6.31□□□□□ -1.4
LIMCH1-219ENST00000514096 GSTZ1O43708 216 aaPredicted RBP6.31□□□□□ -1.4
LIMCH1-219ENST00000514096 CA2P00918 260 aa6.31□□□□□ -1.4
LIMCH1-219ENST00000514096 UNC119Q13432 240 aa6.31□□□□□ -1.4
LIMCH1-219ENST00000514096 ECSCRQ19T08 205 aa6.31□□□□□ -1.4
LIMCH1-219ENST00000514096 TCF19Q9Y242 345 aa6.31□□□□□ -1.4
LIMCH1-219ENST00000514096 H3BVH4 76 aa6.3□□□□□ -1.4
LIMCH1-219ENST00000514096 J3QLI3 93 aa6.3□□□□□ -1.4
LIMCH1-219ENST00000514096 SFT2D2O95562 160 aa6.3□□□□□ -1.4
LIMCH1-219ENST00000514096 IGLV3-1P01715 115 aa6.3□□□□□ -1.4
LIMCH1-219ENST00000514096 CFPP27918 469 aa6.3□□□□□ -1.4
LIMCH1-219ENST00000514096 ERVK11-1P61568 191 aa6.3□□□□□ -1.4
LIMCH1-219ENST00000514096 OR4F5Q8NH21 305 aa6.3□□□□□ -1.4
LIMCH1-219ENST00000514096 RAX2Q96IS3 184 aa6.3□□□□□ -1.4
LIMCH1-219ENST00000514096 RCHY1Q96PM5 261 aa6.3□□□□□ -1.4
LIMCH1-219ENST00000514096 OR4F4Q96R69 305 aa6.3□□□□□ -1.4
LIMCH1-219ENST00000514096 V9GYY9 64 aa6.3□□□□□ -1.4
LIMCH1-219ENST00000514096 TRBV24-1A0A075B6N3 115 aa6.3□□□□□ -1.4
LIMCH1-219ENST00000514096 CST7O76096 145 aa6.3□□□□□ -1.4
LIMCH1-219ENST00000514096 ADMP35318 185 aa6.3□□□□□ -1.4
LIMCH1-219ENST00000514096 RPS20P60866 119 aaKnown RBP6.3□□□□□ -1.4
LIMCH1-219ENST00000514096 MORN2Q502X0 79 aa6.3□□□□□ -1.4
LIMCH1-219ENST00000514096 BVES-AS1Q5T3Y7 98 aa6.3□□□□□ -1.4
LIMCH1-219ENST00000514096 Q6P435 159 aa6.3□□□□□ -1.4
LIMCH1-219ENST00000514096 FAM159AQ6UWV7 190 aa6.3□□□□□ -1.4
LIMCH1-219ENST00000514096 HRCT1Q6UXD1 115 aa6.3□□□□□ -1.4
LIMCH1-219ENST00000514096 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms