RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 TIMM17AQ99595 171 aa1.99□□□□□ -2.09
TOPBP1-208ENST00000511439 HSD17B10Q99714 261 aaKnown RBP1.99□□□□□ -2.09
TOPBP1-208ENST00000511439 MRPS26Q9BYN8 205 aaKnown RBP1.99□□□□□ -2.09
TOPBP1-208ENST00000511439 HRASLSQ9HDD0 168 aa1.99□□□□□ -2.09
TOPBP1-208ENST00000511439 TMEM14BQ9NUH8 114 aa1.99□□□□□ -2.09
TOPBP1-208ENST00000511439 BABAM2Q9NXR7 383 aa1.99□□□□□ -2.09
TOPBP1-208ENST00000511439 CALML5Q9NZT1 146 aa1.99□□□□□ -2.09
TOPBP1-208ENST00000511439 MUC19Q7Z5P9 8384 aa1.98□□□□□ -2.09
TOPBP1-208ENST00000511439 SMIM26A0A096LP01 95 aa1.98□□□□□ -2.09
TOPBP1-208ENST00000511439 ZNF705GA8MUZ8 300 aaPredicted RBP1.98□□□□□ -2.09
TOPBP1-208ENST00000511439 H0YJW9 148 aa1.98□□□□□ -2.09
TOPBP1-208ENST00000511439 M0R135 149 aa1.98□□□□□ -2.09
TOPBP1-208ENST00000511439 HMGN4O00479 90 aa1.98□□□□□ -2.09
TOPBP1-208ENST00000511439 CXCR6O00574 342 aa1.98□□□□□ -2.09
TOPBP1-208ENST00000511439 NDUFS5O43920 106 aa1.98□□□□□ -2.09
TOPBP1-208ENST00000511439 ZNF737O75373 536 aa1.98□□□□□ -2.09
TOPBP1-208ENST00000511439 RBBP9O75884 186 aa1.98□□□□□ -2.09
TOPBP1-208ENST00000511439 SOX14O95416 240 aa1.98□□□□□ -2.09
TOPBP1-208ENST00000511439 GYPCP04921 128 aa1.98□□□□□ -2.09
TOPBP1-208ENST00000511439 ASAH2BP0C7U1 165 aa1.98□□□□□ -2.09
TOPBP1-208ENST00000511439 NFYBP25208 207 aa1.98□□□□□ -2.09
TOPBP1-208ENST00000511439 REG1BP48304 166 aa1.98□□□□□ -2.09
TOPBP1-208ENST00000511439 NKX2-5P52952 324 aaPredicted RBP1.98□□□□□ -2.09
TOPBP1-208ENST00000511439 AP2S1P53680 142 aaPredicted RBP1.98□□□□□ -2.09
TOPBP1-208ENST00000511439 SLC18A1P54219 525 aa1.98□□□□□ -2.09
TOPBP1-208ENST00000511439 CMC4P56277 68 aaPredicted RBP1.98□□□□□ -2.09
TOPBP1-208ENST00000511439 RPL38P63173 70 aaKnown RBP1.98□□□□□ -2.09
TOPBP1-208ENST00000511439 SYCNQ0VAF6 134 aa1.98□□□□□ -2.09
TOPBP1-208ENST00000511439 MOBPQ13875 183 aa1.98□□□□□ -2.09
TOPBP1-208ENST00000511439 GRK1Q15835 563 aa1.98□□□□□ -2.09
TOPBP1-208ENST00000511439 PRSS8Q16651 343 aa1.98□□□□□ -2.09
TOPBP1-208ENST00000511439 DNAL1Q4LDG9 190 aa1.98□□□□□ -2.09
TOPBP1-208ENST00000511439 AKIRIN2Q53H80 203 aa1.98□□□□□ -2.09
TOPBP1-208ENST00000511439 TMEM236Q5W0B7 351 aa1.98□□□□□ -2.09
TOPBP1-208ENST00000511439 HAGHLQ6PII5 290 aaPredicted RBP1.98□□□□□ -2.09
TOPBP1-208ENST00000511439 DNM1P34Q6PK57 102 aa1.98□□□□□ -2.09
TOPBP1-208ENST00000511439 FAM131AQ6UXB0 335 aa1.98□□□□□ -2.09
TOPBP1-208ENST00000511439 STOML3Q8TAV4 291 aa1.98□□□□□ -2.09
TOPBP1-208ENST00000511439 SPTSSAQ969W0 71 aa1.98□□□□□ -2.09
TOPBP1-208ENST00000511439 PTH2Q96A98 100 aa1.98□□□□□ -2.09
TOPBP1-208ENST00000511439 PTX4Q96A99 478 aa1.98□□□□□ -2.09
TOPBP1-208ENST00000511439 SMIM12Q96EX1 92 aa1.98□□□□□ -2.09
TOPBP1-208ENST00000511439 NARS2Q96I59 477 aaKnown RBP1.98□□□□□ -2.09
TOPBP1-208ENST00000511439 USMG5Q96IX5 58 aa1.98□□□□□ -2.09
TOPBP1-208ENST00000511439 PARD6GQ9BYG4 376 aaPredicted RBP1.98□□□□□ -2.09
TOPBP1-208ENST00000511439 ARL6Q9H0F7 186 aa1.98□□□□□ -2.09
TOPBP1-208ENST00000511439 METTL9Q9H1A3 318 aa1.98□□□□□ -2.09
TOPBP1-208ENST00000511439 MARCOQ9UEW3 520 aaPredicted RBP1.98□□□□□ -2.09
TOPBP1-208ENST00000511439 PRO0628Q9UI54 55 aa1.98□□□□□ -2.09
TOPBP1-208ENST00000511439 MPC1Q9Y5U8 109 aa1.98□□□□□ -2.09
TOPBP1-208ENST00000511439 NUBP2Q9Y5Y2 271 aa1.98□□□□□ -2.09
TOPBP1-208ENST00000511439 IGHV3OR16-8A0A075B7F1 116 aa1.97□□□□□ -2.09
TOPBP1-208ENST00000511439 TMEM223A0PJW6 202 aa1.97□□□□□ -2.09
TOPBP1-208ENST00000511439 DAPL1A0PJW8 107 aa1.97□□□□□ -2.09
TOPBP1-208ENST00000511439 A8MWP6 167 aa1.97□□□□□ -2.09
TOPBP1-208ENST00000511439 EFCAB9A8MZ26 197 aa1.97□□□□□ -2.09
TOPBP1-208ENST00000511439 KPNA4O00629 521 aaPredicted RBP1.97□□□□□ -2.09
TOPBP1-208ENST00000511439 BIRC5O15392 142 aa1.97□□□□□ -2.09
TOPBP1-208ENST00000511439 ISG15P05161 165 aa1.97□□□□□ -2.09
TOPBP1-208ENST00000511439 RBP1P09455 135 aa1.97□□□□□ -2.09
TOPBP1-208ENST00000511439 SLC2A1P11166 492 aa1.97□□□□□ -2.09
TOPBP1-208ENST00000511439 CFL1P23528 166 aaKnown RBP1.97□□□□□ -2.09
TOPBP1-208ENST00000511439 TSPOP30536 169 aa1.97□□□□□ -2.09
TOPBP1-208ENST00000511439 PRSS3P35030 304 aa1.97□□□□□ -2.09
TOPBP1-208ENST00000511439 GNG10P50151 68 aa1.97□□□□□ -2.09
TOPBP1-208ENST00000511439 EMP1P54849 157 aa1.97□□□□□ -2.09
TOPBP1-208ENST00000511439 RPL23P62829 140 aaKnown RBP1.97□□□□□ -2.09
TOPBP1-208ENST00000511439 GNG3P63215 75 aa1.97□□□□□ -2.09
TOPBP1-208ENST00000511439 HIST1H3AP68431 136 aa1.97□□□□□ -2.09
TOPBP1-208ENST00000511439 HBG1P69891 147 aa1.97□□□□□ -2.09
TOPBP1-208ENST00000511439 HBG2P69892 147 aa1.97□□□□□ -2.09
TOPBP1-208ENST00000511439 MRPS25P82663 173 aaKnown RBP1.97□□□□□ -2.09
TOPBP1-208ENST00000511439 FAM3AP98173 230 aa1.97□□□□□ -2.09
TOPBP1-208ENST00000511439 PRDX4Q13162 271 aa1.97□□□□□ -2.09
TOPBP1-208ENST00000511439 IBA57Q5T440 356 aaKnown RBP1.97□□□□□ -2.09
TOPBP1-208ENST00000511439 FAM162BQ5T6X4 162 aa1.97□□□□□ -2.09
TOPBP1-208ENST00000511439 HIST2H3PS2Q5TEC6 136 aa1.97□□□□□ -2.09
TOPBP1-208ENST00000511439 HIST2H3AQ71DI3 136 aa1.97□□□□□ -2.09
TOPBP1-208ENST00000511439 NAA40Q86UY6 237 aa1.97□□□□□ -2.09
TOPBP1-208ENST00000511439 C10orf67Q8IYJ2 551 aa1.97□□□□□ -2.09
TOPBP1-208ENST00000511439 Q8N814 137 aa1.97□□□□□ -2.09
TOPBP1-208ENST00000511439 ENKURQ8TC29 256 aa1.97□□□□□ -2.09
TOPBP1-208ENST00000511439 OR5P3Q8WZ94 311 aa1.97□□□□□ -2.09
TOPBP1-208ENST00000511439 AQP3Q92482 292 aa1.97□□□□□ -2.09
TOPBP1-208ENST00000511439 PGLYRP3Q96LB9 341 aa1.97□□□□□ -2.09
TOPBP1-208ENST00000511439 SPIN2AQ99865 258 aa1.97□□□□□ -2.09
TOPBP1-208ENST00000511439 SPIN2BQ9BPZ2 258 aa1.97□□□□□ -2.09
TOPBP1-208ENST00000511439 TMEM243Q9BU79 118 aa1.97□□□□□ -2.09
TOPBP1-208ENST00000511439 PBOV1Q9GZY1 135 aa1.97□□□□□ -2.09
TOPBP1-208ENST00000511439 OR51V1Q9H2C8 321 aa1.97□□□□□ -2.09
TOPBP1-208ENST00000511439 SLC2A9Q9NRM0 540 aa1.97□□□□□ -2.09
TOPBP1-208ENST00000511439 RBFOX1Q9NWB1 397 aaKnown RBP1.97□□□□□ -2.09
TOPBP1-208ENST00000511439 FUOMA2VDF0 154 aa1.96□□□□□ -2.1
TOPBP1-208ENST00000511439 ZNF729A6NN14 1252 aaPredicted RBP1.96□□□□□ -2.1
TOPBP1-208ENST00000511439 ZNF736B4DX44 427 aaPredicted RBP1.96□□□□□ -2.1
TOPBP1-208ENST00000511439 F5H768 121 aa1.96□□□□□ -2.1
TOPBP1-208ENST00000511439 H7C1C5 153 aa1.96□□□□□ -2.1
TOPBP1-208ENST00000511439 PSCAO43653 123 aa1.96□□□□□ -2.1
TOPBP1-208ENST00000511439 GGCTO75223 188 aaKnown RBP1.96□□□□□ -2.1
TOPBP1-208ENST00000511439 MT-ND4P03905 459 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms