RNA–Protein interactions for RNA: ENST00000508756.2

CHD1-205, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-205ENST00000508756 MT-ND6P03923 174 aa2.43□□□□□ -2.02
CHD1-205ENST00000508756 ZNF705BP0CI00 300 aaPredicted RBP2.43□□□□□ -2.02
CHD1-205ENST00000508756 P0DMU3 169 aa2.43□□□□□ -2.02
CHD1-205ENST00000508756 FAM231AP0DMU4 169 aa2.43□□□□□ -2.02
CHD1-205ENST00000508756 FAM231CP0DMU5 169 aa2.43□□□□□ -2.02
CHD1-205ENST00000508756 ZNF846Q147U1 533 aa2.43□□□□□ -2.02
CHD1-205ENST00000508756 CCDC153Q494R4 210 aa2.43□□□□□ -2.02
CHD1-205ENST00000508756 PATE2Q6UY27 113 aa2.43□□□□□ -2.02
CHD1-205ENST00000508756 C4orf22Q6V702 233 aa2.43□□□□□ -2.02
CHD1-205ENST00000508756 LINC00305Q7Z4B0 112 aa2.43□□□□□ -2.02
CHD1-205ENST00000508756 TTTY12Q9BZ98 90 aa2.43□□□□□ -2.02
CHD1-205ENST00000508756 HS3ST2Q9Y278 367 aa2.43□□□□□ -2.02
CHD1-205ENST00000508756 LHFPL6Q9Y693 200 aa2.43□□□□□ -2.02
CHD1-205ENST00000508756 UBR2Q8IWV8 1755 aa2.43□□□□□ -2.02
CHD1-205ENST00000508756 MYO9BQ13459 2157 aa2.43□□□□□ -2.02
CHD1-205ENST00000508756 ADAMTS7Q9UKP4 1686 aa2.42□□□□□ -2.02
CHD1-205ENST00000508756 H3BRN7 92 aa2.42□□□□□ -2.02
CHD1-205ENST00000508756 HIST1H2BKO60814 126 aa2.42□□□□□ -2.02
CHD1-205ENST00000508756 TNFSF15O95150 251 aa2.42□□□□□ -2.02
CHD1-205ENST00000508756 HIST1H2BJP06899 126 aa2.42□□□□□ -2.02
CHD1-205ENST00000508756 SSR2P43308 183 aa2.42□□□□□ -2.02
CHD1-205ENST00000508756 RPS28P62857 69 aaKnown RBP2.42□□□□□ -2.02
CHD1-205ENST00000508756 BRK1Q8WUW1 75 aa2.42□□□□□ -2.02
CHD1-205ENST00000508756 RETNLBQ9BQ08 111 aa2.42□□□□□ -2.02
CHD1-205ENST00000508756 TAS2R4Q9NYW5 299 aa2.42□□□□□ -2.02
CHD1-205ENST00000508756 CCDC88CQ9P219 2028 aa2.42□□□□□ -2.02
CHD1-205ENST00000508756 VWDEQ8N2E2 1590 aa2.41□□□□□ -2.02
CHD1-205ENST00000508756 CAMSAP2Q08AD1 1489 aa2.41□□□□□ -2.02
CHD1-205ENST00000508756 NUP98P52948 1817 aa2.41□□□□□ -2.02
CHD1-205ENST00000508756 LOC107984640A0A0U1RRK4 108 aa2.41□□□□□ -2.02
CHD1-205ENST00000508756 TMEM189A5PLL7 270 aa2.41□□□□□ -2.02
CHD1-205ENST00000508756 C9JAW5 83 aa2.41□□□□□ -2.02
CHD1-205ENST00000508756 C1QCP02747 245 aa2.41□□□□□ -2.02
CHD1-205ENST00000508756 MYL5Q02045 173 aa2.41□□□□□ -2.02
CHD1-205ENST00000508756 VMA21Q3ZAQ7 101 aa2.41□□□□□ -2.02
CHD1-205ENST00000508756 ZNF826PQ6ZT77 177 aa2.41□□□□□ -2.02
CHD1-205ENST00000508756 DEFB128Q7Z7B8 93 aa2.41□□□□□ -2.02
CHD1-205ENST00000508756 LINC00471Q8N535 108 aa2.41□□□□□ -2.02
CHD1-205ENST00000508756 CHCHD1Q96BP2 118 aaKnown RBP2.41□□□□□ -2.02
CHD1-205ENST00000508756 HIGD1AQ9Y241 93 aa2.41□□□□□ -2.02
CHD1-205ENST00000508756 MYH10P35580 1976 aa2.41□□□□□ -2.02
CHD1-205ENST00000508756 RTEL1-TNFRSF6BF6WH68 1400 aa2.41□□□□□ -2.02
CHD1-205ENST00000508756 RPL35P42766 123 aaKnown RBP2.4□□□□□ -2.03
CHD1-205ENST00000508756 DEFB113Q30KQ7 82 aa2.4□□□□□ -2.03
CHD1-205ENST00000508756 SMIM21Q3B7S5 101 aa2.4□□□□□ -2.03
CHD1-205ENST00000508756 PHF5AQ7RTV0 110 aaKnown RBP2.4□□□□□ -2.03
CHD1-205ENST00000508756 OR8I2Q8N0Y5 310 aa2.4□□□□□ -2.03
CHD1-205ENST00000508756 LINC00301Q8NCQ3 95 aa2.4□□□□□ -2.03
CHD1-205ENST00000508756 OR2T35Q8NGX2 323 aa2.4□□□□□ -2.03
CHD1-205ENST00000508756 CXCL16Q9H2A7 254 aa2.4□□□□□ -2.03
CHD1-205ENST00000508756 CST9LQ9H4G1 147 aa2.4□□□□□ -2.03
CHD1-205ENST00000508756 CBLN4Q9NTU7 201 aa2.4□□□□□ -2.03
CHD1-205ENST00000508756 HSPB8Q9UJY1 196 aa2.4□□□□□ -2.03
CHD1-205ENST00000508756 CPDO75976 1380 aa2.39□□□□□ -2.03
CHD1-205ENST00000508756 IGKV2D-26A0A0A0MRZ7 120 aa2.39□□□□□ -2.03
CHD1-205ENST00000508756 IGHV1-58A0A0C4DH39 117 aa2.39□□□□□ -2.03
CHD1-205ENST00000508756 A0A1B0GX51 115 aa2.39□□□□□ -2.03
CHD1-205ENST00000508756 RAB5CP51148 216 aa2.39□□□□□ -2.03
CHD1-205ENST00000508756 NDUFA6P56556 154 aa2.39□□□□□ -2.03
CHD1-205ENST00000508756 DEFB103AP81534 67 aa2.39□□□□□ -2.03
CHD1-205ENST00000508756 KLRD1Q13241 179 aa2.39□□□□□ -2.03
CHD1-205ENST00000508756 PCOTHQ58A44 107 aa2.39□□□□□ -2.03
CHD1-205ENST00000508756 Q5XG85 94 aa2.39□□□□□ -2.03
CHD1-205ENST00000508756 TXNDC17Q9BRA2 123 aa2.39□□□□□ -2.03
CHD1-205ENST00000508756 LXNQ9BS40 222 aa2.39□□□□□ -2.03
CHD1-205ENST00000508756 KRTAP4-1Q9BYQ7 146 aa2.39□□□□□ -2.03
CHD1-205ENST00000508756 TCEAL2Q9H3H9 227 aaPredicted RBP2.39□□□□□ -2.03
CHD1-205ENST00000508756 SPANXA1Q9NS26 97 aa2.39□□□□□ -2.03
CHD1-205ENST00000508756 CEP152O94986 1710 aa2.39□□□□□ -2.03
CHD1-205ENST00000508756 ARAP1Q96P48 1450 aa2.39□□□□□ -2.03
CHD1-205ENST00000508756 TRAV13-1A0A0B4J241 112 aa2.38□□□□□ -2.03
CHD1-205ENST00000508756 OVOS2A0A0G2JMS6 1433 aa2.38□□□□□ -2.03
CHD1-205ENST00000508756 A8MWV9 139 aa2.38□□□□□ -2.03
CHD1-205ENST00000508756 H3BMG7 143 aa2.38□□□□□ -2.03
CHD1-205ENST00000508756 COL4A2P08572 1712 aa2.38□□□□□ -2.03
CHD1-205ENST00000508756 GLI3P10071 1580 aa2.38□□□□□ -2.03
CHD1-205ENST00000508756 RP1P56715 2156 aa2.38□□□□□ -2.03
CHD1-205ENST00000508756 CCDC58Q4VC31 144 aa2.38□□□□□ -2.03
CHD1-205ENST00000508756 C1orf134Q5TEV5 83 aa2.38□□□□□ -2.03
CHD1-205ENST00000508756 TMEM244Q5VVB8 128 aa2.38□□□□□ -2.03
CHD1-205ENST00000508756 OR5D16Q8NGK9 328 aa2.38□□□□□ -2.03
CHD1-205ENST00000508756 OR5H6Q8NGV6 325 aa2.38□□□□□ -2.03
CHD1-205ENST00000508756 POP5Q969H6 163 aaKnown RBP2.38□□□□□ -2.03
CHD1-205ENST00000508756 TMEM106BQ9NUM4 274 aa2.38□□□□□ -2.03
CHD1-205ENST00000508756 NHP2Q9NX24 153 aaKnown RBP2.38□□□□□ -2.03
CHD1-205ENST00000508756 ANKRD31Q8N7Z5 1873 aa2.37□□□□□ -2.03
CHD1-205ENST00000508756 ZFHX2Q9C0A1 2572 aaPredicted RBP2.37□□□□□ -2.03
CHD1-205ENST00000508756 ANAPC1Q9H1A4 1944 aa2.37□□□□□ -2.03
CHD1-205ENST00000508756 UBL3O95164 117 aa2.37□□□□□ -2.03
CHD1-205ENST00000508756 GPX2P18283 190 aa2.37□□□□□ -2.03
CHD1-205ENST00000508756 GTF2A1P52655 376 aaPredicted RBP2.37□□□□□ -2.03
CHD1-205ENST00000508756 FOXA3P55318 350 aaPredicted RBP2.37□□□□□ -2.03
CHD1-205ENST00000508756 PSG9Q00887 426 aa2.37□□□□□ -2.03
CHD1-205ENST00000508756 HIST1H1AQ02539 215 aaPredicted RBP2.37□□□□□ -2.03
CHD1-205ENST00000508756 CLECL1Q8IZS7 167 aa2.37□□□□□ -2.03
CHD1-205ENST00000508756 OR8J3Q8NGG0 315 aa2.37□□□□□ -2.03
CHD1-205ENST00000508756 OR51A4Q8NGJ6 313 aa2.37□□□□□ -2.03
CHD1-205ENST00000508756 AP1S3Q96PC3 154 aa2.37□□□□□ -2.03
CHD1-205ENST00000508756 SMIM3Q9BZL3 60 aa2.37□□□□□ -2.03
CHD1-205ENST00000508756 FKBP11Q9NYL4 201 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms