RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 MAFAQ8NHW3 353 aaPredicted RBP5.96□□□□□ -1.45
UBE2D3-224ENST00000508474 RASL10AQ92737 203 aa5.96□□□□□ -1.45
UBE2D3-224ENST00000508474 SCRT2Q9NQ03 307 aa5.96□□□□□ -1.45
UBE2D3-224ENST00000508474 COL11A2P13942 1736 aaPredicted RBP5.96□□□□□ -1.45
UBE2D3-224ENST00000508474 ANK1P16157 1881 aa5.96□□□□□ -1.46
UBE2D3-224ENST00000508474 IGHV3-66A0A0C4DH42 116 aa5.96□□□□□ -1.46
UBE2D3-224ENST00000508474 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.96□□□□□ -1.46
UBE2D3-224ENST00000508474 SAP30O75446 220 aa5.96□□□□□ -1.46
UBE2D3-224ENST00000508474 DUSP14O95147 198 aaKnown RBP5.96□□□□□ -1.46
UBE2D3-224ENST00000508474 ACYP1P07311 99 aa5.96□□□□□ -1.46
UBE2D3-224ENST00000508474 TRIP6Q15654 476 aaKnown RBP5.96□□□□□ -1.46
UBE2D3-224ENST00000508474 SAP25Q8TEE9 199 aa5.96□□□□□ -1.46
UBE2D3-224ENST00000508474 LINC00479Q96M42 142 aa5.96□□□□□ -1.46
UBE2D3-224ENST00000508474 ZNF747Q9BV97 191 aa5.96□□□□□ -1.46
UBE2D3-224ENST00000508474 S4R3C0 116 aa5.96□□□□□ -1.46
UBE2D3-224ENST00000508474 GREB1Q4ZG55 1949 aa5.96□□□□□ -1.46
UBE2D3-224ENST00000508474 XIRP1Q702N8 1843 aaKnown RBP5.96□□□□□ -1.46
UBE2D3-224ENST00000508474 NPYP01303 97 aa5.96□□□□□ -1.46
UBE2D3-224ENST00000508474 KLRD1Q13241 179 aa5.96□□□□□ -1.46
UBE2D3-224ENST00000508474 CLEC19AQ6UXS0 136 aa5.96□□□□□ -1.46
UBE2D3-224ENST00000508474 ZCCHC24Q8N2G6 241 aaKnown RBP5.96□□□□□ -1.46
UBE2D3-224ENST00000508474 SMIM20Q8N5G0 67 aa5.96□□□□□ -1.46
UBE2D3-224ENST00000508474 SRSF8Q9BRL6 282 aaKnown RBP5.96□□□□□ -1.46
UBE2D3-224ENST00000508474 TOMM7Q9P0U1 55 aa5.96□□□□□ -1.46
UBE2D3-224ENST00000508474 FREM3P0C091 2139 aa5.96□□□□□ -1.46
UBE2D3-224ENST00000508474 C5orf63A6NC05 138 aa5.96□□□□□ -1.46
UBE2D3-224ENST00000508474 IGLV3-19P01714 112 aa5.96□□□□□ -1.46
UBE2D3-224ENST00000508474 VWC2Q2TAL6 325 aa5.96□□□□□ -1.46
UBE2D3-224ENST00000508474 ANKRD39Q53RE8 183 aa5.96□□□□□ -1.46
UBE2D3-224ENST00000508474 PRR31Q5SQ13 230 aa5.96□□□□□ -1.46
UBE2D3-224ENST00000508474 PRSS57Q6UWY2 283 aa5.96□□□□□ -1.46
UBE2D3-224ENST00000508474 TIMM21Q9BVV7 248 aa5.96□□□□□ -1.46
UBE2D3-224ENST00000508474 SMKR1H3BMG3 65 aa5.95□□□□□ -1.46
UBE2D3-224ENST00000508474 HLA-DRB4P13762 266 aa5.95□□□□□ -1.46
UBE2D3-224ENST00000508474 CFHR2P36980 270 aa5.95□□□□□ -1.46
UBE2D3-224ENST00000508474 CFAP161Q6P656 301 aa5.95□□□□□ -1.46
UBE2D3-224ENST00000508474 FOXI2Q6ZQN5 318 aa5.95□□□□□ -1.46
UBE2D3-224ENST00000508474 C15orf53Q8NAA6 179 aa5.95□□□□□ -1.46
UBE2D3-224ENST00000508474 HLA-DRB4X5D2U9 266 aa5.95□□□□□ -1.46
UBE2D3-224ENST00000508474 SEC16AO15027 2179 aa5.95□□□□□ -1.46
UBE2D3-224ENST00000508474 CELA3BP08861 270 aa5.95□□□□□ -1.46
UBE2D3-224ENST00000508474 TCF15Q12870 199 aa5.95□□□□□ -1.46
UBE2D3-224ENST00000508474 FAM201AQ5SY85 155 aa5.95□□□□□ -1.46
UBE2D3-224ENST00000508474 C1orf210Q8IVY1 113 aa5.95□□□□□ -1.46
UBE2D3-224ENST00000508474 DEFB123Q8N688 67 aa5.95□□□□□ -1.46
UBE2D3-224ENST00000508474 SMRP1Q8NCR6 262 aa5.95□□□□□ -1.46
UBE2D3-224ENST00000508474 LINC00477Q96M19 166 aa5.95□□□□□ -1.46
UBE2D3-224ENST00000508474 DUX3Q96PT4 197 aa5.95□□□□□ -1.46
UBE2D3-224ENST00000508474 SHANK2-AS3Q9BTD1 123 aa5.95□□□□□ -1.46
UBE2D3-224ENST00000508474 ZNF581Q9P0T4 197 aa5.95□□□□□ -1.46
UBE2D3-224ENST00000508474 ALPK2Q86TB3 2170 aa5.95□□□□□ -1.46
UBE2D3-224ENST00000508474 MYO7AQ13402 2215 aa5.95□□□□□ -1.46
UBE2D3-224ENST00000508474 IGHV3-64A0A075B6Q5 118 aa5.95□□□□□ -1.46
UBE2D3-224ENST00000508474 LEPROTO15243 131 aa5.95□□□□□ -1.46
UBE2D3-224ENST00000508474 SLC25A16P16260 332 aa5.95□□□□□ -1.46
UBE2D3-224ENST00000508474 LINC01545Q5VT33 79 aa5.95□□□□□ -1.46
UBE2D3-224ENST00000508474 ATP6V0E2Q8NHE4 81 aa5.95□□□□□ -1.46
UBE2D3-224ENST00000508474 BRCA1P38398 1863 aaKnown RBP5.95□□□□□ -1.46
UBE2D3-224ENST00000508474 IGHV3-49A0A0A0MS15 119 aa5.95□□□□□ -1.46
UBE2D3-224ENST00000508474 IGKV3OR2-268A0A0C4DH90 116 aa5.95□□□□□ -1.46
UBE2D3-224ENST00000508474 IGLL5B9A064 214 aa5.95□□□□□ -1.46
UBE2D3-224ENST00000508474 F8VRH5 84 aa5.95□□□□□ -1.46
UBE2D3-224ENST00000508474 K7EN84 100 aa5.95□□□□□ -1.46
UBE2D3-224ENST00000508474 IGKV1-39P01597 117 aa5.95□□□□□ -1.46
UBE2D3-224ENST00000508474 IGKV1D-39P04432 117 aa5.95□□□□□ -1.46
UBE2D3-224ENST00000508474 CCL3L1P16619 93 aa5.95□□□□□ -1.46
UBE2D3-224ENST00000508474 MRPL51Q4U2R6 128 aaKnown RBP5.95□□□□□ -1.46
UBE2D3-224ENST00000508474 TCTEX1D4Q5JR98 221 aa5.95□□□□□ -1.46
UBE2D3-224ENST00000508474 C8orf86Q6ZUL3 223 aa5.95□□□□□ -1.46
UBE2D3-224ENST00000508474 C9orf139Q6ZV77 190 aa5.95□□□□□ -1.46
UBE2D3-224ENST00000508474 TMEM14BQ9NUH8 114 aa5.95□□□□□ -1.46
UBE2D3-224ENST00000508474 C17orf100A8MU93 164 aa5.94□□□□□ -1.46
UBE2D3-224ENST00000508474 H0YJW9 148 aa5.94□□□□□ -1.46
UBE2D3-224ENST00000508474 FGF6P10767 208 aa5.94□□□□□ -1.46
UBE2D3-224ENST00000508474 APOBEC3AP31941 199 aaPredicted RBP5.94□□□□□ -1.46
UBE2D3-224ENST00000508474 C20orf204Q6ZNR8 217 aa5.94□□□□□ -1.46
UBE2D3-224ENST00000508474 ANKRD29Q8N6D5 301 aa5.94□□□□□ -1.46
UBE2D3-224ENST00000508474 LY6G5BQ8NDX9 201 aa5.94□□□□□ -1.46
UBE2D3-224ENST00000508474 PHLDA1Q8WV24 401 aaPredicted RBP5.94□□□□□ -1.46
UBE2D3-224ENST00000508474 HIGD1BQ9P298 99 aa5.94□□□□□ -1.46
UBE2D3-224ENST00000508474 SOCS3O14543 225 aa5.94□□□□□ -1.46
UBE2D3-224ENST00000508474 NUPR1O60356 82 aa5.94□□□□□ -1.46
UBE2D3-224ENST00000508474 CRYBA4P53673 196 aa5.94□□□□□ -1.46
UBE2D3-224ENST00000508474 TDRG1Q3Y452 100 aa5.94□□□□□ -1.46
UBE2D3-224ENST00000508474 ZNF784Q8NCA9 323 aaPredicted RBP5.94□□□□□ -1.46
UBE2D3-224ENST00000508474 PLA2G2EQ9NZK7 142 aa5.94□□□□□ -1.46
UBE2D3-224ENST00000508474 SCN10AQ9Y5Y9 1956 aa5.94□□□□□ -1.46
UBE2D3-224ENST00000508474 COL4A5P29400 1685 aa5.94□□□□□ -1.46
UBE2D3-224ENST00000508474 WIPF3A6NGB9 483 aa5.94□□□□□ -1.46
UBE2D3-224ENST00000508474 K7ERJ3 54 aa5.94□□□□□ -1.46
UBE2D3-224ENST00000508474 NDUFS7O75251 213 aa5.94□□□□□ -1.46
UBE2D3-224ENST00000508474 WNT2P09544 360 aa5.94□□□□□ -1.46
UBE2D3-224ENST00000508474 SIGLEC15Q6ZMC9 328 aa5.94□□□□□ -1.46
UBE2D3-224ENST00000508474 LCNL1Q6ZST4 164 aa5.94□□□□□ -1.46
UBE2D3-224ENST00000508474 TMEM14CQ9P0S9 112 aa5.94□□□□□ -1.46
UBE2D3-224ENST00000508474 BRWD1Q9NSI6 2320 aa5.94□□□□□ -1.46
UBE2D3-224ENST00000508474 CASP8AP2Q9UKL3 1982 aa5.94□□□□□ -1.46
UBE2D3-224ENST00000508474 TMEM213A2RRL7 107 aa5.94□□□□□ -1.46
UBE2D3-224ENST00000508474 J3KT08 172 aa5.94□□□□□ -1.46
UBE2D3-224ENST00000508474 KNTC1P50748 2209 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms