RNA–Protein interactions for RNA: ENST00000498658.5

FXR1-222, Transcript of FMR1 autosomal homolog 1, human

TSL 2

Gene FXR1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-222	ENST00000498658	C1QTNF4	Q9BXJ3	329 aa		7.72	□□□□□ -1.17
FXR1-222	ENST00000498658	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	7.72	□□□□□ -1.17
FXR1-222	ENST00000498658	C11orf1	Q9H5F2	150 aa		7.72	□□□□□ -1.17
FXR1-222	ENST00000498658	UQCC1	Q9NVA1	299 aa		7.72	□□□□□ -1.17
FXR1-222	ENST00000498658	FAM24A	A6NFZ4	105 aa		7.71	□□□□□ -1.18
FXR1-222	ENST00000498658		E5RGE8	158 aa		7.71	□□□□□ -1.18
FXR1-222	ENST00000498658		H3BRN7	92 aa		7.71	□□□□□ -1.18
FXR1-222	ENST00000498658	AGPAT2	O15120	278 aa		7.71	□□□□□ -1.18
FXR1-222	ENST00000498658	SSNA1	O43805	119 aa		7.71	□□□□□ -1.18
FXR1-222	ENST00000498658	CST7	O76096	145 aa		7.71	□□□□□ -1.18
FXR1-222	ENST00000498658	PET100	P0DJ07	73 aa		7.71	□□□□□ -1.18
FXR1-222	ENST00000498658	ARL16	Q0P5N6	197 aa		7.71	□□□□□ -1.18
FXR1-222	ENST00000498658	FOXI2	Q6ZQN5	318 aa		7.71	□□□□□ -1.18
FXR1-222	ENST00000498658	TMEM252	Q8N6L7	170 aa		7.71	□□□□□ -1.18
FXR1-222	ENST00000498658	C16orf92	Q96LL3	132 aa		7.71	□□□□□ -1.18
FXR1-222	ENST00000498658	LINC00052	Q96N35	136 aa		7.71	□□□□□ -1.18
FXR1-222	ENST00000498658	RARRES2	Q99969	163 aa		7.71	□□□□□ -1.18
FXR1-222	ENST00000498658	SHANK2-AS3	Q9BTD1	123 aa		7.71	□□□□□ -1.18
FXR1-222	ENST00000498658	SLC25A31	Q9H0C2	315 aa		7.71	□□□□□ -1.18
FXR1-222	ENST00000498658	ARL6	Q9H0F7	186 aa		7.71	□□□□□ -1.18
FXR1-222	ENST00000498658	SLC25A32	Q9H2D1	315 aa		7.71	□□□□□ -1.18
FXR1-222	ENST00000498658	KMT2C	Q8NEZ4	4911 aa	Known RBP	7.7	□□□□□ -1.18
FXR1-222	ENST00000498658		A0A0J9YWU9	116 aa		7.7	□□□□□ -1.18
FXR1-222	ENST00000498658	KNCN	A6PVL3	124 aa		7.7	□□□□□ -1.18
FXR1-222	ENST00000498658	SOCS3	O14543	225 aa		7.7	□□□□□ -1.18
FXR1-222	ENST00000498658	MPDU1	O75352	247 aa		7.7	□□□□□ -1.18
FXR1-222	ENST00000498658	PTTG1	O95997	202 aa		7.7	□□□□□ -1.18
FXR1-222	ENST00000498658	HLA-DRB4	P13762	266 aa		7.7	□□□□□ -1.18
FXR1-222	ENST00000498658	CAMLG	P49069	296 aa		7.7	□□□□□ -1.18
FXR1-222	ENST00000498658	VWC2	Q2TAL6	325 aa		7.7	□□□□□ -1.18
FXR1-222	ENST00000498658	EBLN2	Q6P2I7	272 aa		7.7	□□□□□ -1.18
FXR1-222	ENST00000498658	OR11H2	Q8NH07	326 aa		7.7	□□□□□ -1.18
FXR1-222	ENST00000498658	CLUHP3	Q96NS8	147 aa		7.7	□□□□□ -1.18
FXR1-222	ENST00000498658	RSG1	Q9BU20	258 aa		7.7	□□□□□ -1.18
FXR1-222	ENST00000498658	ARV1	Q9H2C2	271 aa		7.7	□□□□□ -1.18
FXR1-222	ENST00000498658	RPRM	Q9NS64	109 aa		7.7	□□□□□ -1.18
FXR1-222	ENST00000498658	DOK5	Q9P104	306 aa		7.7	□□□□□ -1.18
FXR1-222	ENST00000498658	WDR83OS	Q9Y284	106 aa		7.7	□□□□□ -1.18
FXR1-222	ENST00000498658	HLA-DRB4	X5D2U9	266 aa		7.7	□□□□□ -1.18
FXR1-222	ENST00000498658		H3BMM0	161 aa		7.69	□□□□□ -1.18
FXR1-222	ENST00000498658	COX7A2P2	O60397	106 aa		7.69	□□□□□ -1.18
FXR1-222	ENST00000498658	BAX	Q07812	192 aa		7.69	□□□□□ -1.18
FXR1-222	ENST00000498658	ZFAND6	Q6FIF0	208 aa		7.69	□□□□□ -1.18
FXR1-222	ENST00000498658	OR1L4	Q8NGR5	311 aa		7.69	□□□□□ -1.18
FXR1-222	ENST00000498658	CHAC2	Q8WUX2	184 aa		7.69	□□□□□ -1.18
FXR1-222	ENST00000498658	PFDN5	Q99471	154 aa		7.69	□□□□□ -1.18
FXR1-222	ENST00000498658	MGST2	Q99735	147 aa		7.69	□□□□□ -1.18
FXR1-222	ENST00000498658	SCRT1	Q9BWW7	348 aa		7.69	□□□□□ -1.18
FXR1-222	ENST00000498658	SAV1	Q9H4B6	383 aa	Predicted RBP	7.69	□□□□□ -1.18
FXR1-222	ENST00000498658	AGRN	O00468	2067 aa		7.68	□□□□□ -1.18
FXR1-222	ENST00000498658	IGSF23	A1L1A6	192 aa		7.68	□□□□□ -1.18
FXR1-222	ENST00000498658	SIX6	O95475	246 aa		7.68	□□□□□ -1.18
FXR1-222	ENST00000498658	RPL29	P47914	159 aa	Known RBP	7.68	□□□□□ -1.18
FXR1-222	ENST00000498658	LRRC37A5P	Q49AS3	106 aa		7.68	□□□□□ -1.18
FXR1-222	ENST00000498658	C10orf113	Q5VZT2	155 aa		7.68	□□□□□ -1.18
FXR1-222	ENST00000498658	LINC00305	Q7Z4B0	112 aa		7.68	□□□□□ -1.18
FXR1-222	ENST00000498658	BPIFA4P	Q86YQ2	179 aa		7.68	□□□□□ -1.18
FXR1-222	ENST00000498658	PPP1R1C	Q8WVI7	109 aa		7.68	□□□□□ -1.18
FXR1-222	ENST00000498658	UHRF2	Q96PU4	802 aa		7.68	□□□□□ -1.18
FXR1-222	ENST00000498658	MFF	Q9GZY8	342 aa		7.68	□□□□□ -1.18
FXR1-222	ENST00000498658	C11orf68	Q9H3H3	251 aa	Known RBP	7.68	□□□□□ -1.18
FXR1-222	ENST00000498658	DNAJC4	Q9NNZ3	241 aa		7.68	□□□□□ -1.18
FXR1-222	ENST00000498658	CSMD3	Q7Z407	3707 aa		7.67	□□□□□ -1.18
FXR1-222	ENST00000498658		A0A087X0K7	114 aa		7.67	□□□□□ -1.18
FXR1-222	ENST00000498658	UBE2L5P	A0A1B0GUS4	154 aa		7.67	□□□□□ -1.18
FXR1-222	ENST00000498658	NUPR2	A6NF83	97 aa		7.67	□□□□□ -1.18
FXR1-222	ENST00000498658	ZNF705E	A8MWA4	302 aa	Predicted RBP	7.67	□□□□□ -1.18
FXR1-222	ENST00000498658	DUSP14	O95147	198 aa	Known RBP	7.67	□□□□□ -1.18
FXR1-222	ENST00000498658	GIG44	P09565	113 aa	Predicted RBP	7.67	□□□□□ -1.18
FXR1-222	ENST00000498658	MIF	P14174	115 aa		7.67	□□□□□ -1.18
FXR1-222	ENST00000498658	CXCL2	P19875	107 aa		7.67	□□□□□ -1.18
FXR1-222	ENST00000498658	C4BPB	P20851	252 aa		7.67	□□□□□ -1.18
FXR1-222	ENST00000498658	H2BFS	P57053	126 aa		7.67	□□□□□ -1.18
FXR1-222	ENST00000498658	FGL1	Q08830	312 aa		7.67	□□□□□ -1.18
FXR1-222	ENST00000498658	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		7.67	□□□□□ -1.18
FXR1-222	ENST00000498658	OR5C1	Q8NGR4	320 aa		7.67	□□□□□ -1.18
FXR1-222	ENST00000498658	LRRC20	Q8TCA0	184 aa		7.67	□□□□□ -1.18
FXR1-222	ENST00000498658	KCNIP2	Q9NS61	270 aa		7.67	□□□□□ -1.18
FXR1-222	ENST00000498658	CLEC5A	Q9NY25	188 aa		7.67	□□□□□ -1.18
FXR1-222	ENST00000498658		A0A0J9YX75	114 aa		7.66	□□□□□ -1.18
FXR1-222	ENST00000498658	CXorf65	A6NEN9	183 aa		7.66	□□□□□ -1.18
FXR1-222	ENST00000498658	FGF7	P21781	194 aa		7.66	□□□□□ -1.18
FXR1-222	ENST00000498658	B2M	P61769	119 aa		7.66	□□□□□ -1.18
FXR1-222	ENST00000498658	PSG9	Q00887	426 aa		7.66	□□□□□ -1.18
FXR1-222	ENST00000498658	EWSR1	Q01844	656 aa	Known RBP eCLIP	7.66	□□□□□ -1.18
FXR1-222	ENST00000498658	OPCML	Q14982	345 aa		7.66	□□□□□ -1.18
FXR1-222	ENST00000498658	LCN15	Q6UWW0	184 aa		7.66	□□□□□ -1.18
FXR1-222	ENST00000498658	PATE2	Q6UY27	113 aa		7.66	□□□□□ -1.18
FXR1-222	ENST00000498658	ZNF709	Q8N972	641 aa		7.66	□□□□□ -1.18
FXR1-222	ENST00000498658	CSNK1G2-AS1	Q8NCQ2	148 aa		7.66	□□□□□ -1.18
FXR1-222	ENST00000498658	OR4B1	Q8NGF8	309 aa		7.66	□□□□□ -1.18
FXR1-222	ENST00000498658	C11orf45	Q8TAV5	145 aa		7.66	□□□□□ -1.18
FXR1-222	ENST00000498658	TMEM37	Q8WXS4	190 aa		7.66	□□□□□ -1.18
FXR1-222	ENST00000498658	SLC39A9	Q9NUM3	307 aa		7.66	□□□□□ -1.18
FXR1-222	ENST00000498658	STARD9	Q9P2P6	4700 aa		7.66	□□□□□ -1.18
FXR1-222	ENST00000498658	SMIM9	A6NGZ8	99 aa		7.65	□□□□□ -1.18
FXR1-222	ENST00000498658	JTB	O76095	146 aa		7.65	□□□□□ -1.18
FXR1-222	ENST00000498658	MPC2	O95563	127 aa		7.65	□□□□□ -1.18
FXR1-222	ENST00000498658	GHRH	P01286	108 aa		7.65	□□□□□ -1.18
FXR1-222	ENST00000498658	AMBP	P02760	352 aa		7.65	□□□□□ -1.18

Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms