RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 HYPMO75409 117 aa9.4□□□□□ -0.9
SEC61A1-206ENST00000491668 JTBO76095 146 aa9.4□□□□□ -0.9
SEC61A1-206ENST00000491668 CXCL2P19875 107 aa9.4□□□□□ -0.9
SEC61A1-206ENST00000491668 RPL29P47914 159 aaKnown RBP9.4□□□□□ -0.9
SEC61A1-206ENST00000491668 B2MP61769 119 aa9.4□□□□□ -0.9
SEC61A1-206ENST00000491668 OPCMLQ14982 345 aa9.4□□□□□ -0.9
SEC61A1-206ENST00000491668 USF2Q15853 346 aaPredicted RBP9.4□□□□□ -0.9
SEC61A1-206ENST00000491668 MIC13Q5XKP0 118 aa9.4□□□□□ -0.9
SEC61A1-206ENST00000491668 FAM90A2PQ658T7 463 aa9.4□□□□□ -0.9
SEC61A1-206ENST00000491668 RPL7L1Q6DKI1 246 aaKnown RBP9.4□□□□□ -0.9
SEC61A1-206ENST00000491668 TMEM182Q6ZP80 229 aaPredicted RBP9.4□□□□□ -0.9
SEC61A1-206ENST00000491668 TMUB2Q71RG4 321 aa9.4□□□□□ -0.9
SEC61A1-206ENST00000491668 STPG3Q8N7X2 389 aa9.4□□□□□ -0.9
SEC61A1-206ENST00000491668 RSG1Q9BU20 258 aa9.4□□□□□ -0.9
SEC61A1-206ENST00000491668 RHPN1-AS1Q9BWJ2 59 aa9.4□□□□□ -0.9
SEC61A1-206ENST00000491668 PARD6GQ9BYG4 376 aaPredicted RBP9.4□□□□□ -0.9
SEC61A1-206ENST00000491668 SLC39A9Q9NUM3 307 aa9.4□□□□□ -0.9
SEC61A1-206ENST00000491668 HIGD1AQ9Y241 93 aa9.4□□□□□ -0.9
SEC61A1-206ENST00000491668 HYDINQ4G0P3 5121 aa9.4□□□□□ -0.91
SEC61A1-206ENST00000491668 IGHV3-66A0A0C4DH42 116 aa9.39□□□□□ -0.91
SEC61A1-206ENST00000491668 APOHP02749 345 aaPredicted RBP9.39□□□□□ -0.91
SEC61A1-206ENST00000491668 C4BPBP20851 252 aa9.39□□□□□ -0.91
SEC61A1-206ENST00000491668 CRYBB3P26998 211 aa9.39□□□□□ -0.91
SEC61A1-206ENST00000491668 RPL11P62913 178 aaKnown RBP9.39□□□□□ -0.91
SEC61A1-206ENST00000491668 PXDC1Q5TGL8 231 aa9.39□□□□□ -0.91
SEC61A1-206ENST00000491668 OR1L4Q8NGR5 311 aa9.39□□□□□ -0.91
SEC61A1-206ENST00000491668 ZNF471Q9BX82 626 aaPredicted RBP9.39□□□□□ -0.91
SEC61A1-206ENST00000491668 KRTAP3-3Q9BYR6 98 aa9.39□□□□□ -0.91
SEC61A1-206ENST00000491668 KRTAP3-2Q9BYR7 98 aa9.39□□□□□ -0.91
SEC61A1-206ENST00000491668 ELOA3CA0A087WX78 387 aaPredicted RBP9.38□□□□□ -0.91
SEC61A1-206ENST00000491668 BCL2L11O43521 198 aa9.38□□□□□ -0.91
SEC61A1-206ENST00000491668 EIF5AP63241 154 aaKnown RBP9.38□□□□□ -0.91
SEC61A1-206ENST00000491668 PRR20EP86478 221 aa9.38□□□□□ -0.91
SEC61A1-206ENST00000491668 PRR20CP86479 221 aa9.38□□□□□ -0.91
SEC61A1-206ENST00000491668 PRR20DP86480 221 aa9.38□□□□□ -0.91
SEC61A1-206ENST00000491668 PRR20BP86481 221 aa9.38□□□□□ -0.91
SEC61A1-206ENST00000491668 PRR20AP86496 221 aa9.38□□□□□ -0.91
SEC61A1-206ENST00000491668 ZNF124Q15973 351 aa9.38□□□□□ -0.91
SEC61A1-206ENST00000491668 FFAR4Q5NUL3 377 aa9.38□□□□□ -0.91
SEC61A1-206ENST00000491668 C10orf113Q5VZT2 155 aa9.38□□□□□ -0.91
SEC61A1-206ENST00000491668 LAMTOR1Q6IAA8 161 aa9.38□□□□□ -0.91
SEC61A1-206ENST00000491668 GNPNAT1Q96EK6 184 aaPredicted RBP9.38□□□□□ -0.91
SEC61A1-206ENST00000491668 PFDN5Q99471 154 aa9.38□□□□□ -0.91
SEC61A1-206ENST00000491668 DNAJC4Q9NNZ3 241 aa9.38□□□□□ -0.91
SEC61A1-206ENST00000491668 RNF24Q9Y225 148 aa9.38□□□□□ -0.91
SEC61A1-206ENST00000491668 LGALSLQ3ZCW2 172 aaPredicted RBP9.37□□□□□ -0.91
SEC61A1-206ENST00000491668 APRG1Q8IVJ8 170 aa9.37□□□□□ -0.91
SEC61A1-206ENST00000491668 ST8SIA2Q92186 375 aa9.37□□□□□ -0.91
SEC61A1-206ENST00000491668 ARV1Q9H2C2 271 aa9.37□□□□□ -0.91
SEC61A1-206ENST00000491668 SLC25A22Q9H936 323 aa9.37□□□□□ -0.91
SEC61A1-206ENST00000491668 TIMM9Q9Y5J7 89 aa9.37□□□□□ -0.91
SEC61A1-206ENST00000491668 EPPK1P58107 5090 aaKnown RBP9.36□□□□□ -0.91
SEC61A1-206ENST00000491668 OR4C46A6NHA9 309 aa9.36□□□□□ -0.91
SEC61A1-206ENST00000491668 ATP6V0CP27449 155 aa9.36□□□□□ -0.91
SEC61A1-206ENST00000491668 NKX2-5P52952 324 aaPredicted RBP9.36□□□□□ -0.91
SEC61A1-206ENST00000491668 PLP1P60201 277 aa9.36□□□□□ -0.91
SEC61A1-206ENST00000491668 ACOT6Q3I5F7 207 aaPredicted RBP9.36□□□□□ -0.91
SEC61A1-206ENST00000491668 LINC00305Q7Z4B0 112 aa9.36□□□□□ -0.91
SEC61A1-206ENST00000491668 OR8I2Q8N0Y5 310 aa9.36□□□□□ -0.91
SEC61A1-206ENST00000491668 UHRF2Q96PU4 802 aa9.36□□□□□ -0.91
SEC61A1-206ENST00000491668 SLC25A39Q9BZJ4 359 aaPredicted RBP9.36□□□□□ -0.91
SEC61A1-206ENST00000491668 VSIRQ9H7M9 311 aa9.36□□□□□ -0.91
SEC61A1-206ENST00000491668 ALMS1Q8TCU4 4167 aa9.36□□□□□ -0.91
SEC61A1-206ENST00000491668 IGKV3-7A0A075B6H7 116 aa9.35□□□□□ -0.91
SEC61A1-206ENST00000491668 HELTA6NFD8 242 aa9.35□□□□□ -0.91
SEC61A1-206ENST00000491668 CD5P06127 495 aa9.35□□□□□ -0.91
SEC61A1-206ENST00000491668 TPT1P13693 172 aaKnown RBP9.35□□□□□ -0.91
SEC61A1-206ENST00000491668 RPL35AP18077 110 aaKnown RBP9.35□□□□□ -0.91
SEC61A1-206ENST00000491668 TFPI2P48307 235 aa9.35□□□□□ -0.91
SEC61A1-206ENST00000491668 PAFAH1B2P68402 229 aa9.35□□□□□ -0.91
SEC61A1-206ENST00000491668 DEFB135Q30KP9 77 aa9.35□□□□□ -0.91
SEC61A1-206ENST00000491668 C1orf194Q5T5A4 169 aa9.35□□□□□ -0.91
SEC61A1-206ENST00000491668 Q6ZWC4 215 aa9.35□□□□□ -0.91
SEC61A1-206ENST00000491668 TCF24Q7RTU0 167 aa9.35□□□□□ -0.91
SEC61A1-206ENST00000491668 WFDC3Q8IUB2 231 aa9.35□□□□□ -0.91
SEC61A1-206ENST00000491668 C9orf62Q8N4C0 152 aa9.35□□□□□ -0.91
SEC61A1-206ENST00000491668 GBGT1Q8N5D6 347 aa9.35□□□□□ -0.91
SEC61A1-206ENST00000491668 OR2G3Q8NGZ4 309 aa9.35□□□□□ -0.91
SEC61A1-206ENST00000491668 GATAD1Q8WUU5 269 aa9.35□□□□□ -0.91
SEC61A1-206ENST00000491668 PSMG3Q9BT73 122 aaPredicted RBP9.35□□□□□ -0.91
SEC61A1-206ENST00000491668 SCRT1Q9BWW7 348 aa9.35□□□□□ -0.91
SEC61A1-206ENST00000491668 SH3BGRL3Q9H299 93 aa9.35□□□□□ -0.91
SEC61A1-206ENST00000491668 SLC25A32Q9H2D1 315 aa9.35□□□□□ -0.91
SEC61A1-206ENST00000491668 CYTL1Q9NRR1 136 aa9.35□□□□□ -0.91
SEC61A1-206ENST00000491668 A0A1W2PPV4 95 aa9.34□□□□□ -0.91
SEC61A1-206ENST00000491668 ZNF98A6NK75 572 aa9.34□□□□□ -0.91
SEC61A1-206ENST00000491668 H3BRN7 92 aa9.34□□□□□ -0.91
SEC61A1-206ENST00000491668 DNASE2O00115 360 aaPredicted RBP9.34□□□□□ -0.91
SEC61A1-206ENST00000491668 BUB3O43684 328 aa9.34□□□□□ -0.91
SEC61A1-206ENST00000491668 MBP02144 154 aa9.34□□□□□ -0.91
SEC61A1-206ENST00000491668 SERF2P84101 59 aa9.34□□□□□ -0.91
SEC61A1-206ENST00000491668 GCSAMLQ5JQS6 135 aa9.34□□□□□ -0.91
SEC61A1-206ENST00000491668 FAM78BQ5VT40 261 aa9.34□□□□□ -0.91
SEC61A1-206ENST00000491668 LEMD1Q68G75 181 aa9.34□□□□□ -0.91
SEC61A1-206ENST00000491668 C16orf54Q6UWD8 224 aa9.34□□□□□ -0.91
SEC61A1-206ENST00000491668 PATE2Q6UY27 113 aa9.34□□□□□ -0.91
SEC61A1-206ENST00000491668 SIGLEC15Q6ZMC9 328 aa9.34□□□□□ -0.91
SEC61A1-206ENST00000491668 FAM24BQ8N5W8 94 aa9.34□□□□□ -0.91
SEC61A1-206ENST00000491668 GPR82Q96P67 336 aa9.34□□□□□ -0.91
SEC61A1-206ENST00000491668 SHANK2-AS3Q9BTD1 123 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms