RNA–Protein interactions for RNA: ENST00000472442.2

SCAMP4-207, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-207ENST00000472442 LY6HO94772 140 aa10.56□□□□□ -0.72
SCAMP4-207ENST00000472442 HLA-DRB1P01911 266 aa10.56□□□□□ -0.72
SCAMP4-207ENST00000472442 PATE2Q6UY27 113 aa10.56□□□□□ -0.72
SCAMP4-207ENST00000472442 OR1L8Q8NGR8 309 aa10.56□□□□□ -0.72
SCAMP4-207ENST00000472442 FXYD5Q96DB9 178 aa10.56□□□□□ -0.72
SCAMP4-207ENST00000472442 MRPL20Q9BYC9 149 aaKnown RBP10.56□□□□□ -0.72
SCAMP4-207ENST00000472442 SLC25A5P05141 298 aaKnown RBP10.56□□□□□ -0.72
SCAMP4-207ENST00000472442 GPR183P32249 361 aa10.56□□□□□ -0.72
SCAMP4-207ENST00000472442 BLNKQ8WV28 456 aa10.56□□□□□ -0.72
SCAMP4-207ENST00000472442 SELENOKQ9Y6D0 94 aa10.56□□□□□ -0.72
SCAMP4-207ENST00000472442 C7orf71A4D174 169 aa10.56□□□□□ -0.72
SCAMP4-207ENST00000472442 LIPFP07098 398 aa10.56□□□□□ -0.72
SCAMP4-207ENST00000472442 SAA1P0DJI8 122 aaPredicted RBP10.56□□□□□ -0.72
SCAMP4-207ENST00000472442 RIPPLY3P57055 190 aa10.56□□□□□ -0.72
SCAMP4-207ENST00000472442 PKD1L2Q7Z442 2459 aa10.56□□□□□ -0.72
SCAMP4-207ENST00000472442 DLX1P56177 255 aa10.55□□□□□ -0.72
SCAMP4-207ENST00000472442 PET117Q6UWS5 81 aa10.55□□□□□ -0.72
SCAMP4-207ENST00000472442 LHFPL4Q7Z7J7 247 aa10.55□□□□□ -0.72
SCAMP4-207ENST00000472442 EPDR1Q9UM22 224 aa10.55□□□□□ -0.72
SCAMP4-207ENST00000472442 MOSP00540 346 aa10.55□□□□□ -0.72
SCAMP4-207ENST00000472442 IGLC1P0CG04 106 aa10.55□□□□□ -0.72
SCAMP4-207ENST00000472442 IGHV1-8P0DP01 117 aa10.55□□□□□ -0.72
SCAMP4-207ENST00000472442 UQCRFS1P47985 274 aa10.55□□□□□ -0.72
SCAMP4-207ENST00000472442 TMEM177Q53S58 311 aa10.55□□□□□ -0.72
SCAMP4-207ENST00000472442 LINC00311Q8N616 119 aa10.55□□□□□ -0.72
SCAMP4-207ENST00000472442 TACC2O95359 2948 aa10.55□□□□□ -0.72
SCAMP4-207ENST00000472442 A0A1W2PPR1 153 aa10.54□□□□□ -0.72
SCAMP4-207ENST00000472442 A8MWL6 223 aa10.54□□□□□ -0.72
SCAMP4-207ENST00000472442 P01737 135 aa10.54□□□□□ -0.72
SCAMP4-207ENST00000472442 CSN3P07498 182 aa10.54□□□□□ -0.72
SCAMP4-207ENST00000472442 ARF6P62330 175 aa10.54□□□□□ -0.72
SCAMP4-207ENST00000472442 C11orf71Q6IPW1 123 aa10.54□□□□□ -0.72
SCAMP4-207ENST00000472442 C2orf91Q6ZV80 131 aa10.54□□□□□ -0.72
SCAMP4-207ENST00000472442 OR5AN1Q8NGI8 311 aa10.54□□□□□ -0.72
SCAMP4-207ENST00000472442 OR1L4Q8NGR5 311 aa10.54□□□□□ -0.72
SCAMP4-207ENST00000472442 GPR82Q96P67 336 aa10.54□□□□□ -0.72
SCAMP4-207ENST00000472442 MS4A6AQ9H2W1 248 aa10.54□□□□□ -0.72
SCAMP4-207ENST00000472442 RALYQ9UKM9 306 aaKnown RBP10.54□□□□□ -0.72
SCAMP4-207ENST00000472442 CHEK1O14757 476 aa10.54□□□□□ -0.72
SCAMP4-207ENST00000472442 FSTL3O95633 263 aa10.54□□□□□ -0.72
SCAMP4-207ENST00000472442 APOA2P02652 100 aa10.54□□□□□ -0.72
SCAMP4-207ENST00000472442 MYCNOSP40205 109 aa10.54□□□□□ -0.72
SCAMP4-207ENST00000472442 PDPNQ86YL7 162 aa10.54□□□□□ -0.72
SCAMP4-207ENST00000472442 C8orf31Q8N9H6 132 aa10.54□□□□□ -0.72
SCAMP4-207ENST00000472442 OR10X1Q8NGY0 326 aa10.54□□□□□ -0.72
SCAMP4-207ENST00000472442 NPIPB3Q92617 1050 aa10.54□□□□□ -0.72
SCAMP4-207ENST00000472442 MALRD1Q5VYJ5 2156 aa10.54□□□□□ -0.72
SCAMP4-207ENST00000472442 PGPA6NDG6 321 aa10.53□□□□□ -0.72
SCAMP4-207ENST00000472442 TMEM238C9JI98 176 aa10.53□□□□□ -0.72
SCAMP4-207ENST00000472442 PRB3Q04118 309 aaPredicted RBP10.53□□□□□ -0.72
SCAMP4-207ENST00000472442 LINC00305Q7Z4B0 112 aa10.53□□□□□ -0.72
SCAMP4-207ENST00000472442 CACNG8Q8WXS5 425 aa10.53□□□□□ -0.72
SCAMP4-207ENST00000472442 SMIM12Q96EX1 92 aa10.53□□□□□ -0.72
SCAMP4-207ENST00000472442 FNDC4Q9H6D8 234 aaPredicted RBP10.53□□□□□ -0.72
SCAMP4-207ENST00000472442 SPTBN1Q01082 2364 aaKnown RBP10.53□□□□□ -0.72
SCAMP4-207ENST00000472442 GAGE10A6NGK3 116 aa10.53□□□□□ -0.72
SCAMP4-207ENST00000472442 OR5AL1P0C617 328 aa10.53□□□□□ -0.72
SCAMP4-207ENST00000472442 ATP5IP56385 69 aaPredicted RBP10.53□□□□□ -0.72
SCAMP4-207ENST00000472442 MLST8Q9BVC4 326 aa10.53□□□□□ -0.72
SCAMP4-207ENST00000472442 TMUB1Q9BVT8 246 aa10.53□□□□□ -0.72
SCAMP4-207ENST00000472442 PRSS22Q9GZN4 317 aa10.53□□□□□ -0.72
SCAMP4-207ENST00000472442 ZNF430Q9H8G1 570 aaPredicted RBP10.53□□□□□ -0.72
SCAMP4-207ENST00000472442 FAM231BA6NCW3 169 aa10.53□□□□□ -0.72
SCAMP4-207ENST00000472442 E7EUB6 86 aa10.53□□□□□ -0.72
SCAMP4-207ENST00000472442 COX8AP10176 69 aa10.53□□□□□ -0.72
SCAMP4-207ENST00000472442 HTR1DP28221 377 aa10.53□□□□□ -0.72
SCAMP4-207ENST00000472442 BPIFA4PQ86YQ2 179 aa10.53□□□□□ -0.72
SCAMP4-207ENST00000472442 HSPB8Q9UJY1 196 aa10.53□□□□□ -0.72
SCAMP4-207ENST00000472442 SOX21Q9Y651 276 aaPredicted RBP10.53□□□□□ -0.72
SCAMP4-207ENST00000472442 H3BTX0 84 aa10.52□□□□□ -0.73
SCAMP4-207ENST00000472442 RBPMS2Q6ZRY4 209 aaKnown RBP10.52□□□□□ -0.73
SCAMP4-207ENST00000472442 TEX45Q8NA69 505 aa10.52□□□□□ -0.73
SCAMP4-207ENST00000472442 TMEM186Q96B77 213 aa10.52□□□□□ -0.73
SCAMP4-207ENST00000472442 IGKV1D-37A0A075B6S9 117 aa10.52□□□□□ -0.73
SCAMP4-207ENST00000472442 TCRBV4S1A1TA0A5B7 111 aa10.52□□□□□ -0.73
SCAMP4-207ENST00000472442 ERHP84090 104 aaKnown RBP10.52□□□□□ -0.73
SCAMP4-207ENST00000472442 LINC01545Q5VT33 79 aa10.52□□□□□ -0.73
SCAMP4-207ENST00000472442 TMEM133Q9H2Q1 129 aa10.52□□□□□ -0.73
SCAMP4-207ENST00000472442 MRPL36Q9P0J6 103 aaKnown RBP10.52□□□□□ -0.73
SCAMP4-207ENST00000472442 C19orf71A6NCJ1 209 aa10.51□□□□□ -0.73
SCAMP4-207ENST00000472442 ORM2P19652 201 aa10.51□□□□□ -0.73
SCAMP4-207ENST00000472442 GNLYP22749 145 aa10.51□□□□□ -0.73
SCAMP4-207ENST00000472442 TMEM97Q5BJF2 176 aa10.51□□□□□ -0.73
SCAMP4-207ENST00000472442 FER1L6-AS1Q8NA97 138 aa10.51□□□□□ -0.73
SCAMP4-207ENST00000472442 OSR1Q8TAX0 266 aaPredicted RBP10.51□□□□□ -0.73
SCAMP4-207ENST00000472442 ITLN2Q8WWU7 325 aaPredicted RBP10.51□□□□□ -0.73
SCAMP4-207ENST00000472442 NDFIP1Q9BT67 221 aa10.51□□□□□ -0.73
SCAMP4-207ENST00000472442 RAB1BQ9H0U4 201 aa10.51□□□□□ -0.73
SCAMP4-207ENST00000472442 NDUFA4L2Q9NRX3 87 aa10.51□□□□□ -0.73
SCAMP4-207ENST00000472442 KLF12Q9Y4X4 402 aa10.51□□□□□ -0.73
SCAMP4-207ENST00000472442 CT83Q5H943 113 aa10.51□□□□□ -0.73
SCAMP4-207ENST00000472442 C10orf55Q5SWW7 151 aa10.51□□□□□ -0.73
SCAMP4-207ENST00000472442 OR1B1Q8NGR6 318 aa10.51□□□□□ -0.73
SCAMP4-207ENST00000472442 DAZAP1Q96EP5 407 aaKnown RBP10.51□□□□□ -0.73
SCAMP4-207ENST00000472442 HARBI1Q96MB7 349 aa10.51□□□□□ -0.73
SCAMP4-207ENST00000472442 NAA38Q9BRA0 125 aaKnown RBP10.51□□□□□ -0.73
SCAMP4-207ENST00000472442 NCR2O95944 276 aa10.5□□□□□ -0.73
SCAMP4-207ENST00000472442 JMJD8Q96S16 334 aa10.5□□□□□ -0.73
SCAMP4-207ENST00000472442 WT1-ASQ06250 92 aa10.5□□□□□ -0.73
SCAMP4-207ENST00000472442 FLYWCH2Q96CP2 140 aaKnown RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms