RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 C11orf44Q8N8P7 122 aa11.64□□□□□ -0.55
TMEM39A-203ENST00000461654 FAM210AQ96ND0 272 aa11.64□□□□□ -0.55
TMEM39A-203ENST00000461654 CITED4Q96RK1 184 aa11.64□□□□□ -0.55
TMEM39A-203ENST00000461654 PAXXQ9BUH6 204 aa11.64□□□□□ -0.55
TMEM39A-203ENST00000461654 SCRT1Q9BWW7 348 aa11.64□□□□□ -0.55
TMEM39A-203ENST00000461654 SLC25A2Q9BXI2 301 aa11.64□□□□□ -0.55
TMEM39A-203ENST00000461654 UFC1Q9Y3C8 167 aa11.64□□□□□ -0.55
TMEM39A-203ENST00000461654 IGHV3OR16-8A0A075B7F1 116 aa11.63□□□□□ -0.55
TMEM39A-203ENST00000461654 ZNF98A6NK75 572 aa11.63□□□□□ -0.55
TMEM39A-203ENST00000461654 LINC01619G3V211 115 aa11.63□□□□□ -0.55
TMEM39A-203ENST00000461654 I3L521 148 aa11.63□□□□□ -0.55
TMEM39A-203ENST00000461654 TOR2AQ5JU69 321 aa11.63□□□□□ -0.55
TMEM39A-203ENST00000461654 OR1N2Q8NGR9 330 aa11.63□□□□□ -0.55
TMEM39A-203ENST00000461654 TMEM190Q8WZ59 177 aa11.63□□□□□ -0.55
TMEM39A-203ENST00000461654 GRAMD2BQ96HH9 432 aa11.63□□□□□ -0.55
TMEM39A-203ENST00000461654 FAM167A-AS1Q96KT0 104 aa11.63□□□□□ -0.55
TMEM39A-203ENST00000461654 GPR82Q96P67 336 aa11.63□□□□□ -0.55
TMEM39A-203ENST00000461654 TMPRSS5Q9H3S3 457 aa11.63□□□□□ -0.55
TMEM39A-203ENST00000461654 TREM1Q9NP99 234 aa11.63□□□□□ -0.55
TMEM39A-203ENST00000461654 TMEM14CQ9P0S9 112 aa11.63□□□□□ -0.55
TMEM39A-203ENST00000461654 IGHV4OR15-8A0A075B7B6 117 aa11.62□□□□□ -0.55
TMEM39A-203ENST00000461654 A0A087WW49 117 aa11.62□□□□□ -0.55
TMEM39A-203ENST00000461654 A0A1W2PS18 150 aa11.62□□□□□ -0.55
TMEM39A-203ENST00000461654 ADARB2-AS1A8MUL3 147 aa11.62□□□□□ -0.55
TMEM39A-203ENST00000461654 OR10J4P0C629 311 aa11.62□□□□□ -0.55
TMEM39A-203ENST00000461654 BCL2P10415 239 aa11.62□□□□□ -0.55
TMEM39A-203ENST00000461654 RPL7P18124 248 aaKnown RBP11.62□□□□□ -0.55
TMEM39A-203ENST00000461654 BMI1P35226 326 aa11.62□□□□□ -0.55
TMEM39A-203ENST00000461654 MORN5Q5VZ52 161 aa11.62□□□□□ -0.55
TMEM39A-203ENST00000461654 LEMD1Q68G75 181 aa11.62□□□□□ -0.55
TMEM39A-203ENST00000461654 OR8I2Q8N0Y5 310 aa11.62□□□□□ -0.55
TMEM39A-203ENST00000461654 EIF4E3Q8N5X7 224 aaKnown RBP11.62□□□□□ -0.55
TMEM39A-203ENST00000461654 OR4F17Q8NGA8 305 aa11.62□□□□□ -0.55
TMEM39A-203ENST00000461654 OR4F4Q96R69 305 aa11.62□□□□□ -0.55
TMEM39A-203ENST00000461654 CITED2Q99967 270 aaPredicted RBP11.62□□□□□ -0.55
TMEM39A-203ENST00000461654 SMDT1Q9H4I9 107 aa11.62□□□□□ -0.55
TMEM39A-203ENST00000461654 VWFP04275 2813 aa11.62□□□□□ -0.55
TMEM39A-203ENST00000461654 K7EMT4 169 aa11.61□□□□□ -0.55
TMEM39A-203ENST00000461654 ZNF207O43670 478 aaKnown RBP11.61□□□□□ -0.55
TMEM39A-203ENST00000461654 CRYBB3P26998 211 aa11.61□□□□□ -0.55
TMEM39A-203ENST00000461654 HOXD3P31249 432 aaPredicted RBP11.61□□□□□ -0.55
TMEM39A-203ENST00000461654 C1orf194Q5T5A4 169 aa11.61□□□□□ -0.55
TMEM39A-203ENST00000461654 KPRPQ5T749 579 aaPredicted RBP11.61□□□□□ -0.55
TMEM39A-203ENST00000461654 UNQ9165/PRO28630Q6UXU0 137 aa11.61□□□□□ -0.55
TMEM39A-203ENST00000461654 C1QL4Q86Z23 238 aa11.61□□□□□ -0.55
TMEM39A-203ENST00000461654 OR11H1Q8NG94 326 aa11.61□□□□□ -0.55
TMEM39A-203ENST00000461654 TMEM231Q9H6L2 316 aa11.61□□□□□ -0.55
TMEM39A-203ENST00000461654 DAZ1Q9NQZ3 744 aaKnown RBP11.61□□□□□ -0.55
TMEM39A-203ENST00000461654 VAX2Q9UIW0 290 aa11.61□□□□□ -0.55
TMEM39A-203ENST00000461654 LOC102723971A0A1B0GUV8 181 aa11.6□□□□□ -0.55
TMEM39A-203ENST00000461654 A0A1W2PRX2 142 aa11.6□□□□□ -0.55
TMEM39A-203ENST00000461654 LGALS9O00182 355 aa11.6□□□□□ -0.55
TMEM39A-203ENST00000461654 PYYP10082 97 aa11.6□□□□□ -0.55
TMEM39A-203ENST00000461654 UBE2G2P60604 165 aa11.6□□□□□ -0.55
TMEM39A-203ENST00000461654 ZNF506Q5JVG8 444 aa11.6□□□□□ -0.55
TMEM39A-203ENST00000461654 CST9LP1Q5W188 147 aa11.6□□□□□ -0.55
TMEM39A-203ENST00000461654 HIST2H2BDQ6DRA6 164 aa11.6□□□□□ -0.55
TMEM39A-203ENST00000461654 REC114Q7Z4M0 266 aa11.6□□□□□ -0.55
TMEM39A-203ENST00000461654 ZNF414Q96IQ9 312 aa11.6□□□□□ -0.55
TMEM39A-203ENST00000461654 TXNDC17Q9BRA2 123 aa11.6□□□□□ -0.55
TMEM39A-203ENST00000461654 ARL2-SNX15V9GYD0 113 aa11.6□□□□□ -0.55
TMEM39A-203ENST00000461654 BUB3O43684 328 aa11.59□□□□□ -0.55
TMEM39A-203ENST00000461654 PAGE4O60829 102 aa11.59□□□□□ -0.55
TMEM39A-203ENST00000461654 NBEAP1P0C6P0 100 aa11.59□□□□□ -0.55
TMEM39A-203ENST00000461654 HIST1H1EP10412 219 aaKnown RBP11.59□□□□□ -0.55
TMEM39A-203ENST00000461654 GP9P14770 177 aa11.59□□□□□ -0.55
TMEM39A-203ENST00000461654 ATF4P18848 351 aaPredicted RBP11.59□□□□□ -0.55
TMEM39A-203ENST00000461654 GALR1P47211 349 aa11.59□□□□□ -0.55
TMEM39A-203ENST00000461654 DEFB136Q30KP8 78 aa11.59□□□□□ -0.55
TMEM39A-203ENST00000461654 SAMD5Q5TGI4 173 aa11.59□□□□□ -0.55
TMEM39A-203ENST00000461654 C18orf65Q6ZTR6 163 aa11.59□□□□□ -0.55
TMEM39A-203ENST00000461654 C8orf86Q6ZUL3 223 aa11.59□□□□□ -0.55
TMEM39A-203ENST00000461654 RXFP4Q8TDU9 374 aa11.59□□□□□ -0.55
TMEM39A-203ENST00000461654 FXYD5Q96DB9 178 aa11.59□□□□□ -0.55
TMEM39A-203ENST00000461654 ZNF503Q96F45 646 aa11.59□□□□□ -0.55
TMEM39A-203ENST00000461654 NKX6-2Q9C056 277 aaPredicted RBP11.59□□□□□ -0.55
TMEM39A-203ENST00000461654 IGHV7-4-1A0A0J9YVY3 117 aa11.58□□□□□ -0.56
TMEM39A-203ENST00000461654 SYNJ2BPP57105 145 aa11.58□□□□□ -0.56
TMEM39A-203ENST00000461654 MEF2BQ02080 365 aaPredicted RBP11.58□□□□□ -0.56
TMEM39A-203ENST00000461654 NSUN5P1Q3KNT7 163 aa11.58□□□□□ -0.56
TMEM39A-203ENST00000461654 WFDC9Q8NEX5 89 aa11.58□□□□□ -0.56
TMEM39A-203ENST00000461654 SUN5Q8TC36 379 aa11.58□□□□□ -0.56
TMEM39A-203ENST00000461654 BLNKQ8WV28 456 aa11.58□□□□□ -0.56
TMEM39A-203ENST00000461654 RARRES2Q99969 163 aa11.58□□□□□ -0.56
TMEM39A-203ENST00000461654 ELOVL1Q9BW60 279 aa11.58□□□□□ -0.56
TMEM39A-203ENST00000461654 PEMTQ9UBM1 199 aa11.58□□□□□ -0.56
TMEM39A-203ENST00000461654 U3KQE9 123 aa11.58□□□□□ -0.56
TMEM39A-203ENST00000461654 IGHV3OR16-13A0A075B7E8 117 aa11.57□□□□□ -0.56
TMEM39A-203ENST00000461654 IGHV3-49A0A0A0MS15 119 aa11.57□□□□□ -0.56
TMEM39A-203ENST00000461654 IGHV3-74A0A0B4J1X5 117 aa11.57□□□□□ -0.56
TMEM39A-203ENST00000461654 IGHV3-66A0A0C4DH42 116 aa11.57□□□□□ -0.56
TMEM39A-203ENST00000461654 A0A1W2PRE2 83 aa11.57□□□□□ -0.56
TMEM39A-203ENST00000461654 ZNF785A8K8V0 405 aa11.57□□□□□ -0.56
TMEM39A-203ENST00000461654 A8MWP6 167 aa11.57□□□□□ -0.56
TMEM39A-203ENST00000461654 C11orf94C9JXX5 98 aa11.57□□□□□ -0.56
TMEM39A-203ENST00000461654 ATP6V1G1O75348 118 aa11.57□□□□□ -0.56
TMEM39A-203ENST00000461654 CD5P06127 495 aa11.57□□□□□ -0.56
TMEM39A-203ENST00000461654 KLF5Q13887 457 aaPredicted RBP11.57□□□□□ -0.56
TMEM39A-203ENST00000461654 ICAM4Q14773 271 aa11.57□□□□□ -0.56
TMEM39A-203ENST00000461654 BEAN1Q3B7T3 259 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms