RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 DNAJC30Q96LL9 226 aa3.08□□□□□ -1.92
SBDSP1-204ENST00000453858 DCUN1D5Q9BTE7 237 aa3.08□□□□□ -1.92
SBDSP1-204ENST00000453858 SELENOIQ9C0D9 397 aa3.08□□□□□ -1.92
SBDSP1-204ENST00000453858 GFRA4Q9GZZ7 299 aa3.08□□□□□ -1.92
SBDSP1-204ENST00000453858 BANF2Q9H503 90 aa3.08□□□□□ -1.92
SBDSP1-204ENST00000453858 NDUFA4L2Q9NRX3 87 aa3.08□□□□□ -1.92
SBDSP1-204ENST00000453858 PRO0255Q9UI72 69 aa3.08□□□□□ -1.92
SBDSP1-204ENST00000453858 HHLA3Q9XRX5 114 aa3.08□□□□□ -1.92
SBDSP1-204ENST00000453858 TRAV8-3A0A0A6YYJ7 113 aa3.07□□□□□ -1.92
SBDSP1-204ENST00000453858 E5RGE8 158 aa3.07□□□□□ -1.92
SBDSP1-204ENST00000453858 TNFRSF11BO00300 401 aa3.07□□□□□ -1.92
SBDSP1-204ENST00000453858 UPK2O00526 184 aa3.07□□□□□ -1.92
SBDSP1-204ENST00000453858 NME4O00746 187 aa3.07□□□□□ -1.92
SBDSP1-204ENST00000453858 GNG7O60262 68 aa3.07□□□□□ -1.92
SBDSP1-204ENST00000453858 PITX3O75364 302 aa3.07□□□□□ -1.92
SBDSP1-204ENST00000453858 CLN5O75503 358 aa3.07□□□□□ -1.92
SBDSP1-204ENST00000453858 CCNB2O95067 398 aa3.07□□□□□ -1.92
SBDSP1-204ENST00000453858 MT-CO2P00403 227 aa3.07□□□□□ -1.92
SBDSP1-204ENST00000453858 CD37P11049 281 aa3.07□□□□□ -1.92
SBDSP1-204ENST00000453858 HTN1P15515 57 aa3.07□□□□□ -1.92
SBDSP1-204ENST00000453858 CD36P16671 472 aa3.07□□□□□ -1.92
SBDSP1-204ENST00000453858 EIF2B2P49770 351 aaKnown RBP3.07□□□□□ -1.92
SBDSP1-204ENST00000453858 CACNG7P62955 275 aa3.07□□□□□ -1.92
SBDSP1-204ENST00000453858 HLA-DRB3P79483 266 aa3.07□□□□□ -1.92
SBDSP1-204ENST00000453858 CKAP4Q07065 602 aaKnown RBP3.07□□□□□ -1.92
SBDSP1-204ENST00000453858 MEF2DQ14814 521 aa3.07□□□□□ -1.92
SBDSP1-204ENST00000453858 KRTAP19-6Q3LI70 58 aa3.07□□□□□ -1.92
SBDSP1-204ENST00000453858 TP53I3Q53FA7 332 aa3.07□□□□□ -1.92
SBDSP1-204ENST00000453858 OR2G6Q5TZ20 316 aa3.07□□□□□ -1.92
SBDSP1-204ENST00000453858 TMEM236Q5W0B7 351 aa3.07□□□□□ -1.92
SBDSP1-204ENST00000453858 C6orf201Q7Z4U5 140 aa3.07□□□□□ -1.92
SBDSP1-204ENST00000453858 HSD17B13Q7Z5P4 300 aaPredicted RBP3.07□□□□□ -1.92
SBDSP1-204ENST00000453858 OR1P1Q8NH06 330 aa3.07□□□□□ -1.92
SBDSP1-204ENST00000453858 SPACA4Q8TDM5 124 aa3.07□□□□□ -1.92
SBDSP1-204ENST00000453858 HDHD3Q9BSH5 251 aaPredicted RBP3.07□□□□□ -1.92
SBDSP1-204ENST00000453858 MRPL32Q9BYC8 188 aaKnown RBP3.07□□□□□ -1.92
SBDSP1-204ENST00000453858 NSG2Q9Y328 171 aa3.07□□□□□ -1.92
SBDSP1-204ENST00000453858 H3BN98 237 aa3.06□□□□□ -1.92
SBDSP1-204ENST00000453858 WRBO00258 174 aa3.06□□□□□ -1.92
SBDSP1-204ENST00000453858 IGKV1-17P01599 117 aa3.06□□□□□ -1.92
SBDSP1-204ENST00000453858 IGHV3-30P01768 117 aa3.06□□□□□ -1.92
SBDSP1-204ENST00000453858 IGHV3-33P01772 117 aa3.06□□□□□ -1.92
SBDSP1-204ENST00000453858 TRAPPC2P0DI81 140 aa3.06□□□□□ -1.92
SBDSP1-204ENST00000453858 TRAPPC2BP0DI82 140 aa3.06□□□□□ -1.92
SBDSP1-204ENST00000453858 IGHV3-30-3P0DP02 117 aa3.06□□□□□ -1.92
SBDSP1-204ENST00000453858 IGHV3-30-5P0DP03 117 aa3.06□□□□□ -1.92
SBDSP1-204ENST00000453858 PSMB3P49720 205 aa3.06□□□□□ -1.92
SBDSP1-204ENST00000453858 PPT1P50897 306 aa3.06□□□□□ -1.92
SBDSP1-204ENST00000453858 TAS2R43P59537 309 aa3.06□□□□□ -1.92
SBDSP1-204ENST00000453858 ZNF846Q147U1 533 aa3.06□□□□□ -1.92
SBDSP1-204ENST00000453858 TIMM50Q3ZCQ8 353 aa3.06□□□□□ -1.92
SBDSP1-204ENST00000453858 EBLN2Q6P2I7 272 aa3.06□□□□□ -1.92
SBDSP1-204ENST00000453858 MOB1BQ7L9L4 216 aa3.06□□□□□ -1.92
SBDSP1-204ENST00000453858 ERASQ7Z444 233 aa3.06□□□□□ -1.92
SBDSP1-204ENST00000453858 ATP6V0E2Q8NHE4 81 aa3.06□□□□□ -1.92
SBDSP1-204ENST00000453858 GPR148Q8TDV2 347 aa3.06□□□□□ -1.92
SBDSP1-204ENST00000453858 CMTM5Q96DZ9 223 aa3.06□□□□□ -1.92
SBDSP1-204ENST00000453858 ZNF184Q99676 751 aaPredicted RBP3.06□□□□□ -1.92
SBDSP1-204ENST00000453858 PDCD1LG2Q9BQ51 273 aa3.06□□□□□ -1.92
SBDSP1-204ENST00000453858 DCSTAMPQ9H295 470 aa3.06□□□□□ -1.92
SBDSP1-204ENST00000453858 TMEM138Q9NPI0 162 aa3.06□□□□□ -1.92
SBDSP1-204ENST00000453858 TAS2R4Q9NYW5 299 aa3.06□□□□□ -1.92
SBDSP1-204ENST00000453858 DOK5Q9P104 306 aa3.06□□□□□ -1.92
SBDSP1-204ENST00000453858 PSORS1C1Q9UIG5 152 aa3.06□□□□□ -1.92
SBDSP1-204ENST00000453858 GNG8Q9UK08 70 aa3.06□□□□□ -1.92
SBDSP1-204ENST00000453858 TRBV6-7A0A0A0MS04 114 aa3.05□□□□□ -1.92
SBDSP1-204ENST00000453858 MUC21A0A0G2JKD1 596 aa3.05□□□□□ -1.92
SBDSP1-204ENST00000453858 MRASO14807 208 aa3.05□□□□□ -1.92
SBDSP1-204ENST00000453858 TNFSF12O43508 249 aa3.05□□□□□ -1.92
SBDSP1-204ENST00000453858 PRKYO43930 277 aa3.05□□□□□ -1.92
SBDSP1-204ENST00000453858 WBP4O75554 376 aaKnown RBP3.05□□□□□ -1.92
SBDSP1-204ENST00000453858 FABP3P05413 133 aa3.05□□□□□ -1.92
SBDSP1-204ENST00000453858 MNAT1P51948 309 aa3.05□□□□□ -1.92
SBDSP1-204ENST00000453858 PRCDQ00LT1 54 aa3.05□□□□□ -1.92
SBDSP1-204ENST00000453858 FGL1Q08830 312 aa3.05□□□□□ -1.92
SBDSP1-204ENST00000453858 SLAQ13239 276 aa3.05□□□□□ -1.92
SBDSP1-204ENST00000453858 SSX1Q16384 188 aa3.05□□□□□ -1.92
SBDSP1-204ENST00000453858 POU2AF1Q16633 256 aa3.05□□□□□ -1.92
SBDSP1-204ENST00000453858 OR2B11Q5JQS5 317 aa3.05□□□□□ -1.92
SBDSP1-204ENST00000453858 TTC23Q5W5X9 447 aa3.05□□□□□ -1.92
SBDSP1-204ENST00000453858 GLYATQ6IB77 296 aa3.05□□□□□ -1.92
SBDSP1-204ENST00000453858 GLIPR1L1Q6UWM5 242 aa3.05□□□□□ -1.92
SBDSP1-204ENST00000453858 KRTAP7-1Q8IUC3 87 aa3.05□□□□□ -1.92
SBDSP1-204ENST00000453858 IFT20Q8IY31 132 aa3.05□□□□□ -1.92
SBDSP1-204ENST00000453858 ZFP41Q8N8Y5 198 aa3.05□□□□□ -1.92
SBDSP1-204ENST00000453858 ZNF485Q8NCK3 441 aa3.05□□□□□ -1.92
SBDSP1-204ENST00000453858 GTSF1Q8WW33 167 aa3.05□□□□□ -1.92
SBDSP1-204ENST00000453858 GPR146Q96CH1 333 aa3.05□□□□□ -1.92
SBDSP1-204ENST00000453858 NRBF2Q96F24 287 aa3.05□□□□□ -1.92
SBDSP1-204ENST00000453858 FAM218AQ96MZ4 157 aa3.05□□□□□ -1.92
SBDSP1-204ENST00000453858 S100A13Q99584 98 aa3.05□□□□□ -1.92
SBDSP1-204ENST00000453858 PAIP2Q9BPZ3 127 aaKnown RBP3.05□□□□□ -1.92
SBDSP1-204ENST00000453858 COMMD5Q9GZQ3 224 aa3.05□□□□□ -1.92
SBDSP1-204ENST00000453858 PARLQ9H300 379 aa3.05□□□□□ -1.92
SBDSP1-204ENST00000453858 MED4Q9NPJ6 270 aa3.05□□□□□ -1.92
SBDSP1-204ENST00000453858 MRPL36Q9P0J6 103 aaKnown RBP3.05□□□□□ -1.92
SBDSP1-204ENST00000453858 MGAT4AQ9UM21 535 aa3.05□□□□□ -1.92
SBDSP1-204ENST00000453858 TRGV2A0A075B6R0 118 aa3.04□□□□□ -1.92
SBDSP1-204ENST00000453858 TRAV8-1A0A0A6YYK1 113 aa3.04□□□□□ -1.92
SBDSP1-204ENST00000453858 TMEM235A6NFC5 223 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms