RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 ZGRF1Q86YA3 2104 aa6.06□□□□□ -1.44
CPSF6-202ENST00000435070 PGPA6NDG6 321 aa6.06□□□□□ -1.44
CPSF6-202ENST00000435070 REG1BP48304 166 aa6.06□□□□□ -1.44
CPSF6-202ENST00000435070 LINC01545Q5VT33 79 aa6.06□□□□□ -1.44
CPSF6-202ENST00000435070 FLYWCH2Q96CP2 140 aaKnown RBP6.06□□□□□ -1.44
CPSF6-202ENST00000435070 SLC25A10Q9UBX3 287 aaPredicted RBP6.06□□□□□ -1.44
CPSF6-202ENST00000435070 PAXXQ9BUH6 204 aa6.06□□□□□ -1.44
CPSF6-202ENST00000435070 IGLV3-12A0A075B6K2 115 aa6.06□□□□□ -1.44
CPSF6-202ENST00000435070 TRAV8-1A0A0A6YYK1 113 aa6.06□□□□□ -1.44
CPSF6-202ENST00000435070 FXYD2P54710 66 aa6.06□□□□□ -1.44
CPSF6-202ENST00000435070 RASL11AQ6T310 242 aa6.06□□□□□ -1.44
CPSF6-202ENST00000435070 BCL6BQ8N143 479 aaPredicted RBP6.06□□□□□ -1.44
CPSF6-202ENST00000435070 SRSF8Q9BRL6 282 aaKnown RBP6.06□□□□□ -1.44
CPSF6-202ENST00000435070 ZNF747Q9BV97 191 aa6.06□□□□□ -1.44
CPSF6-202ENST00000435070 IGHV3-21A0A0B4J1V1 117 aa6.06□□□□□ -1.44
CPSF6-202ENST00000435070 H3BMG7 143 aa6.06□□□□□ -1.44
CPSF6-202ENST00000435070 SMIM13P0DJ93 91 aa6.06□□□□□ -1.44
CPSF6-202ENST00000435070 GATA3P23771 443 aa6.06□□□□□ -1.44
CPSF6-202ENST00000435070 CIRBPQ14011 172 aaKnown RBP6.06□□□□□ -1.44
CPSF6-202ENST00000435070 C5orf47Q569G3 176 aa6.06□□□□□ -1.44
CPSF6-202ENST00000435070 CFHR5Q9BXR6 569 aa6.06□□□□□ -1.44
CPSF6-202ENST00000435070 SMPXQ9UHP9 88 aa6.06□□□□□ -1.44
CPSF6-202ENST00000435070 A0A1B0GXF2 115 aa6.06□□□□□ -1.44
CPSF6-202ENST00000435070 TMEM258P61165 79 aa6.06□□□□□ -1.44
CPSF6-202ENST00000435070 CFAP161Q6P656 301 aa6.06□□□□□ -1.44
CPSF6-202ENST00000435070 LCNL1Q6ZST4 164 aa6.06□□□□□ -1.44
CPSF6-202ENST00000435070 MOGAT3Q86VF5 341 aa6.06□□□□□ -1.44
CPSF6-202ENST00000435070 INSIG2Q9Y5U4 225 aa6.06□□□□□ -1.44
CPSF6-202ENST00000435070 DSCAML1Q8TD84 2053 aa6.06□□□□□ -1.44
CPSF6-202ENST00000435070 AGRNO00468 2067 aa6.05□□□□□ -1.44
CPSF6-202ENST00000435070 hADV38S2A0JD32 116 aa6.05□□□□□ -1.44
CPSF6-202ENST00000435070 MGST3O14880 152 aa6.05□□□□□ -1.44
CPSF6-202ENST00000435070 NKX2-8O15522 239 aa6.05□□□□□ -1.44
CPSF6-202ENST00000435070 MOSP00540 346 aa6.05□□□□□ -1.44
CPSF6-202ENST00000435070 PF4V1P10720 104 aa6.05□□□□□ -1.44
CPSF6-202ENST00000435070 FGF6P10767 208 aa6.05□□□□□ -1.44
CPSF6-202ENST00000435070 B3GALT5-AS1P59052 145 aa6.05□□□□□ -1.44
CPSF6-202ENST00000435070 C18orf15Q96N68 181 aa6.05□□□□□ -1.44
CPSF6-202ENST00000435070 SS18L2Q9UHA2 77 aa6.05□□□□□ -1.44
CPSF6-202ENST00000435070 WNK2Q9Y3S1 2297 aa6.05□□□□□ -1.44
CPSF6-202ENST00000435070 KBTBD11-OT1A0A1B0GTJ5 212 aa6.05□□□□□ -1.44
CPSF6-202ENST00000435070 MAGEA5P43359 124 aa6.05□□□□□ -1.44
CPSF6-202ENST00000435070 IL11RAQ14626 422 aa6.05□□□□□ -1.44
CPSF6-202ENST00000435070 PCOLCEQ15113 449 aa6.05□□□□□ -1.44
CPSF6-202ENST00000435070 Q71RC1 249 aaPredicted RBP6.05□□□□□ -1.44
CPSF6-202ENST00000435070 RPP21Q9H633 154 aaKnown RBP6.05□□□□□ -1.44
CPSF6-202ENST00000435070 IGKV3D-15A0A087WSY6 115 aa6.05□□□□□ -1.44
CPSF6-202ENST00000435070 IGKV3-15P01624 115 aa6.05□□□□□ -1.44
CPSF6-202ENST00000435070 HSPE1P61604 102 aaKnown RBP6.05□□□□□ -1.44
CPSF6-202ENST00000435070 SSBP2P81877 361 aaPredicted RBP6.05□□□□□ -1.44
CPSF6-202ENST00000435070 PPP1R32Q7Z5V6 425 aa6.05□□□□□ -1.44
CPSF6-202ENST00000435070 C17orf82Q86X59 251 aaPredicted RBP6.05□□□□□ -1.44
CPSF6-202ENST00000435070 TMEM262E9PQX1 116 aa6.05□□□□□ -1.44
CPSF6-202ENST00000435070 NDUFC2O95298 119 aa6.05□□□□□ -1.44
CPSF6-202ENST00000435070 ID1P41134 155 aa6.05□□□□□ -1.44
CPSF6-202ENST00000435070 MRPL55Q7Z7F7 128 aaKnown RBP6.05□□□□□ -1.44
CPSF6-202ENST00000435070 SLC25A45Q8N413 288 aa6.05□□□□□ -1.44
CPSF6-202ENST00000435070 MRPL16Q9NX20 251 aaKnown RBP6.05□□□□□ -1.44
CPSF6-202ENST00000435070 COL8A1P27658 744 aa6.05□□□□□ -1.44
CPSF6-202ENST00000435070 Q8IYB0 196 aa6.05□□□□□ -1.44
CPSF6-202ENST00000435070 IFI27P40305 119 aaPredicted RBP6.04□□□□□ -1.44
CPSF6-202ENST00000435070 VGLL1Q99990 258 aa6.04□□□□□ -1.44
CPSF6-202ENST00000435070 LINC00470Q9BZP3 86 aa6.04□□□□□ -1.44
CPSF6-202ENST00000435070 PPP1R17O96001 155 aa6.04□□□□□ -1.44
CPSF6-202ENST00000435070 HIST1H4AP62805 103 aaKnown RBP6.04□□□□□ -1.44
CPSF6-202ENST00000435070 ZNF146Q15072 292 aa6.04□□□□□ -1.44
CPSF6-202ENST00000435070 ZNF329Q86UD4 541 aa6.04□□□□□ -1.44
CPSF6-202ENST00000435070 C20orf78Q9BR46 151 aa6.04□□□□□ -1.44
CPSF6-202ENST00000435070 FNDC10F2Z333 226 aa6.04□□□□□ -1.44
CPSF6-202ENST00000435070 ZNF134P52741 427 aa6.04□□□□□ -1.44
CPSF6-202ENST00000435070 MEIG1Q5JSS6 88 aa6.04□□□□□ -1.44
CPSF6-202ENST00000435070 BOD1L2Q8IYS8 172 aa6.04□□□□□ -1.44
CPSF6-202ENST00000435070 CIARTQ8N365 385 aaPredicted RBP6.04□□□□□ -1.44
CPSF6-202ENST00000435070 SLC25A2Q9BXI2 301 aa6.04□□□□□ -1.44
CPSF6-202ENST00000435070 A0A1W2PR77 199 aa6.04□□□□□ -1.44
CPSF6-202ENST00000435070 LOXL3P58215 753 aa6.04□□□□□ -1.44
CPSF6-202ENST00000435070 FAM231DQ6ZW35 169 aa6.04□□□□□ -1.44
CPSF6-202ENST00000435070 MDP1Q86V88 176 aa6.04□□□□□ -1.44
CPSF6-202ENST00000435070 FAM167A-AS1Q96KT0 104 aa6.04□□□□□ -1.44
CPSF6-202ENST00000435070 PRELID3AQ96N28 172 aa6.04□□□□□ -1.44
CPSF6-202ENST00000435070 ERVK11-1P61568 191 aa6.04□□□□□ -1.44
CPSF6-202ENST00000435070 C1orf229Q6ZS94 237 aaPredicted RBP6.04□□□□□ -1.44
CPSF6-202ENST00000435070 TMSB15BA0A087X1C1 80 aa6.04□□□□□ -1.44
CPSF6-202ENST00000435070 IGHV1OR15-9A0A0B4J2B8 117 aa6.04□□□□□ -1.44
CPSF6-202ENST00000435070 LTAP01374 205 aa6.04□□□□□ -1.44
CPSF6-202ENST00000435070 LGALS3P17931 250 aaKnown RBP6.04□□□□□ -1.44
CPSF6-202ENST00000435070 ASCL5Q7RTU5 278 aa6.04□□□□□ -1.44
CPSF6-202ENST00000435070 POLEQ07864 2286 aa6.03□□□□□ -1.44
CPSF6-202ENST00000435070 TRAV8-4A0A0B4J246 113 aa6.03□□□□□ -1.44
CPSF6-202ENST00000435070 PINLYPA6NC86 204 aa6.03□□□□□ -1.44
CPSF6-202ENST00000435070 C15orf61A6NNL5 157 aa6.03□□□□□ -1.44
CPSF6-202ENST00000435070 ATP5L2Q7Z4Y8 100 aa6.03□□□□□ -1.44
CPSF6-202ENST00000435070 PDPNQ86YL7 162 aa6.03□□□□□ -1.44
CPSF6-202ENST00000435070 ARMS2P0C7Q2 107 aa6.03□□□□□ -1.44
CPSF6-202ENST00000435070 RAXQ9Y2V3 346 aa6.03□□□□□ -1.44
CPSF6-202ENST00000435070 NCKAP5O14513 1909 aa6.03□□□□□ -1.44
CPSF6-202ENST00000435070 TGFAP01135 160 aa6.03□□□□□ -1.44
CPSF6-202ENST00000435070 CFHR2P36980 270 aa6.03□□□□□ -1.44
CPSF6-202ENST00000435070 C10orf113Q5VZT2 155 aa6.03□□□□□ -1.44
CPSF6-202ENST00000435070 FAM222BQ8WU58 562 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms