RNA–Protein interactions for RNA: ENST00000427231.6

NEB-209, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-209ENST00000427231 HLA-DMBP28068 263 aa2.1□□□□□ -2.07
NEB-209ENST00000427231 RBM3P98179 157 aaKnown RBP2.1□□□□□ -2.07
NEB-209ENST00000427231 RNF144BQ7Z419 303 aa2.1□□□□□ -2.07
NEB-209ENST00000427231 TMEM75Q8N9X5 138 aa2.1□□□□□ -2.07
NEB-209ENST00000427231 WFDC6Q9BQY6 131 aa2.1□□□□□ -2.07
NEB-209ENST00000427231 SIGLEC8Q9NYZ4 499 aa2.1□□□□□ -2.07
NEB-209ENST00000427231 J3QKU1 62 aa2.1□□□□□ -2.07
NEB-209ENST00000427231 THBDP07204 575 aa2.1□□□□□ -2.07
NEB-209ENST00000427231 PAX9P55771 341 aa2.1□□□□□ -2.07
NEB-209ENST00000427231 HERVK_113P63121 156 aa2.1□□□□□ -2.07
NEB-209ENST00000427231 ACTL10Q5JWF8 245 aa2.1□□□□□ -2.07
NEB-209ENST00000427231 HIST2H2BCQ6DN03 193 aa2.1□□□□□ -2.07
NEB-209ENST00000427231 HIST2H2BDQ6DRA6 164 aa2.1□□□□□ -2.07
NEB-209ENST00000427231 MDS2Q8NDY4 140 aa2.1□□□□□ -2.07
NEB-209ENST00000427231 FGFBP3Q8TAT2 258 aa2.1□□□□□ -2.07
NEB-209ENST00000427231 SRRM5B3KS81 715 aa2.1□□□□□ -2.07
NEB-209ENST00000427231 CTLA4P16410 223 aa2.1□□□□□ -2.07
NEB-209ENST00000427231 ZNF32P17041 273 aa2.1□□□□□ -2.07
NEB-209ENST00000427231 LEPP41159 167 aa2.1□□□□□ -2.07
NEB-209ENST00000427231 NDUFA4O00483 81 aa2.1□□□□□ -2.07
NEB-209ENST00000427231 IGLL1P15814 213 aa2.1□□□□□ -2.07
NEB-209ENST00000427231 NPCDR1Q9BY65 106 aa2.1□□□□□ -2.07
NEB-209ENST00000427231 M0R381 172 aa2.1□□□□□ -2.07
NEB-209ENST00000427231 CLEC7AQ9BXN2 247 aa2.1□□□□□ -2.07
NEB-209ENST00000427231 C15orf53Q8NAA6 179 aa2.1□□□□□ -2.07
NEB-209ENST00000427231 OCC1Q8TAD7 63 aa2.1□□□□□ -2.07
NEB-209ENST00000427231 B4DSR2 109 aa2.1□□□□□ -2.07
NEB-209ENST00000427231 M0R2P5 195 aa2.1□□□□□ -2.07
NEB-209ENST00000427231 ATXN8Q156A1 80 aa2.1□□□□□ -2.07
NEB-209ENST00000427231 LINC01555Q8NAE3 123 aa2.1□□□□□ -2.07
NEB-209ENST00000427231 PYGO2Q9BRQ0 406 aa2.1□□□□□ -2.07
NEB-209ENST00000427231 WDR83OSQ9Y284 106 aa2.1□□□□□ -2.07
NEB-209ENST00000427231 HCFC1P51610 2035 aa2.1□□□□□ -2.07
NEB-209ENST00000427231 SHISA3A0PJX4 238 aa2.09□□□□□ -2.07
NEB-209ENST00000427231 TAX1BP3O14907 124 aa2.09□□□□□ -2.07
NEB-209ENST00000427231 ZNF818PQ6ZRF7 136 aa2.09□□□□□ -2.07
NEB-209ENST00000427231 RNASE2P10153 161 aaKnown RBP2.09□□□□□ -2.07
NEB-209ENST00000427231 CD69Q07108 199 aa2.09□□□□□ -2.07
NEB-209ENST00000427231 GTSCR1Q86UQ5 136 aa2.09□□□□□ -2.07
NEB-209ENST00000427231 DEFB125Q8N687 156 aa2.09□□□□□ -2.07
NEB-209ENST00000427231 FAM110AQ9BQ89 295 aa2.09□□□□□ -2.07
NEB-209ENST00000427231 IDI2-AS1Q9NZ38 188 aa2.09□□□□□ -2.07
NEB-209ENST00000427231 NEUROG3Q9Y4Z2 214 aa2.09□□□□□ -2.07
NEB-209ENST00000427231 K7EMT4 169 aa2.09□□□□□ -2.07
NEB-209ENST00000427231 FRMD6-AS1P0C7T7 363 aa2.09□□□□□ -2.07
NEB-209ENST00000427231 ZNF497Q6ZNH5 498 aa2.09□□□□□ -2.07
NEB-209ENST00000427231 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.09□□□□□ -2.07
NEB-209ENST00000427231 SAA2-SAA4A0A096LPE2 208 aa2.09□□□□□ -2.07
NEB-209ENST00000427231 SUPT4H1P63272 117 aaKnown RBP2.09□□□□□ -2.07
NEB-209ENST00000427231 MRPL55Q7Z7F7 128 aaKnown RBP2.09□□□□□ -2.07
NEB-209ENST00000427231 PLPPR2Q96GM1 343 aa2.09□□□□□ -2.07
NEB-209ENST00000427231 CHCHD7Q9BUK0 85 aa2.09□□□□□ -2.07
NEB-209ENST00000427231 PLA2G2EQ9NZK7 142 aa2.09□□□□□ -2.07
NEB-209ENST00000427231 DEPPQ9NTK1 212 aa2.09□□□□□ -2.07
NEB-209ENST00000427231 C3P01024 1663 aa2.09□□□□□ -2.07
NEB-209ENST00000427231 OR11H6Q8NGC7 330 aa2.09□□□□□ -2.07
NEB-209ENST00000427231 EAF1Q96JC9 268 aaPredicted RBP2.09□□□□□ -2.07
NEB-209ENST00000427231 PRORYQ9H606 182 aa2.09□□□□□ -2.07
NEB-209ENST00000427231 IGLC6P0CF74 106 aa2.09□□□□□ -2.07
NEB-209ENST00000427231 C9orf47Q6ZRZ4 202 aa2.09□□□□□ -2.07
NEB-209ENST00000427231 PEBP1P30086 187 aaKnown RBP2.09□□□□□ -2.07
NEB-209ENST00000427231 RHOHQ15669 191 aa2.09□□□□□ -2.07
NEB-209ENST00000427231 NTN3O00634 580 aaPredicted RBP2.09□□□□□ -2.07
NEB-209ENST00000427231 ZNF708P17019 499 aa2.09□□□□□ -2.07
NEB-209ENST00000427231 NSUN5P1Q3KNT7 163 aa2.09□□□□□ -2.07
NEB-209ENST00000427231 PLA2G2FQ9BZM2 168 aa2.09□□□□□ -2.07
NEB-209ENST00000427231 CRYGCP07315 174 aa2.09□□□□□ -2.07
NEB-209ENST00000427231 LGALS3P17931 250 aaKnown RBP2.09□□□□□ -2.07
NEB-209ENST00000427231 SP5Q6BEB4 398 aaPredicted RBP2.09□□□□□ -2.07
NEB-209ENST00000427231 ZNF492Q9P255 531 aa2.09□□□□□ -2.07
NEB-209ENST00000427231 PRR19A6NJB7 356 aa2.09□□□□□ -2.07
NEB-209ENST00000427231 ERCC8Q13216 396 aa2.09□□□□□ -2.07
NEB-209ENST00000427231 C9orf139Q6ZV77 190 aa2.09□□□□□ -2.07
NEB-209ENST00000427231 COX6B1P14854 86 aa2.09□□□□□ -2.07
NEB-209ENST00000427231 KHDC1LQ5JSQ8 128 aa2.09□□□□□ -2.07
NEB-209ENST00000427231 CRIPAKQ8N1N5 446 aa2.09□□□□□ -2.07
NEB-209ENST00000427231 RNF138Q8WVD3 245 aa2.09□□□□□ -2.07
NEB-209ENST00000427231 METRNQ9UJH8 293 aa2.09□□□□□ -2.08
NEB-209ENST00000427231 TMEM256-PLSCR3K7ERE1 68 aa2.09□□□□□ -2.08
NEB-209ENST00000427231 CXCL13O43927 109 aa2.09□□□□□ -2.08
NEB-209ENST00000427231 ATP5EP2Q5VTU8 51 aa2.09□□□□□ -2.08
NEB-209ENST00000427231 TEX36Q5VZQ5 186 aa2.09□□□□□ -2.08
NEB-209ENST00000427231 LYRM9A8MSI8 78 aa2.09□□□□□ -2.08
NEB-209ENST00000427231 K7EP34 96 aa2.09□□□□□ -2.08
NEB-209ENST00000427231 RPUSD1Q9UJJ7 312 aaKnown RBP2.09□□□□□ -2.08
NEB-209ENST00000427231 SMIM9A6NGZ8 99 aa2.09□□□□□ -2.08
NEB-209ENST00000427231 YPEL4Q96NS1 127 aa2.09□□□□□ -2.08
NEB-209ENST00000427231 VPREB3Q9UKI3 123 aa2.09□□□□□ -2.08
NEB-209ENST00000427231 TRAV12-2A0A075B6T6 113 aa2.09□□□□□ -2.08
NEB-209ENST00000427231 C19orf54Q5BKX5 351 aa2.09□□□□□ -2.08
NEB-209ENST00000427231 VSIRQ9H7M9 311 aa2.09□□□□□ -2.08
NEB-209ENST00000427231 ZNF71Q9NQZ8 489 aaPredicted RBP2.09□□□□□ -2.08
NEB-209ENST00000427231 TMEM14BQ9NUH8 114 aa2.09□□□□□ -2.08
NEB-209ENST00000427231 EPDR1Q9UM22 224 aa2.09□□□□□ -2.08
NEB-209ENST00000427231 IGHV5-51A0A0C4DH38 117 aa2.09□□□□□ -2.08
NEB-209ENST00000427231 F5H768 121 aa2.09□□□□□ -2.08
NEB-209ENST00000427231 PEX7O00628 323 aa2.09□□□□□ -2.08
NEB-209ENST00000427231 IGLC1P0CG04 106 aa2.09□□□□□ -2.08
NEB-209ENST00000427231 C18orf12Q96KH6 178 aa2.09□□□□□ -2.08
NEB-209ENST00000427231 PNPLA5Q7Z6Z6 429 aaPredicted RBP2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms