RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 C5orf56Q8N8D9 126 aa2.93□□□□□ -1.94
HMGB3P20-201ENST00000417997 BPIFCQ8NFQ6 507 aa2.93□□□□□ -1.94
HMGB3P20-201ENST00000417997 LINC00052Q96N35 136 aa2.93□□□□□ -1.94
HMGB3P20-201ENST00000417997 MRPL32Q9BYC8 188 aaKnown RBP2.93□□□□□ -1.94
HMGB3P20-201ENST00000417997 TNFRSF19Q9NS68 423 aa2.93□□□□□ -1.94
HMGB3P20-201ENST00000417997 ZNF355PQ9NSJ1 428 aa2.93□□□□□ -1.94
HMGB3P20-201ENST00000417997 DOK5Q9P104 306 aa2.93□□□□□ -1.94
HMGB3P20-201ENST00000417997 ACACBO00763 2458 aa2.93□□□□□ -1.94
HMGB3P20-201ENST00000417997 ABCA2Q9BZC7 2435 aa2.92□□□□□ -1.94
HMGB3P20-201ENST00000417997 DSPP15924 2871 aaKnown RBP2.92□□□□□ -1.94
HMGB3P20-201ENST00000417997 IGHV4-4A0A075B6R2 117 aa2.92□□□□□ -1.94
HMGB3P20-201ENST00000417997 TRAV30A0A087WSZ9 112 aa2.92□□□□□ -1.94
HMGB3P20-201ENST00000417997 A0A087WW49 117 aa2.92□□□□□ -1.94
HMGB3P20-201ENST00000417997 IGHV7-81A0A0B4J1V7 117 aa2.92□□□□□ -1.94
HMGB3P20-201ENST00000417997 TRAV41A0A0B4J266 112 aa2.92□□□□□ -1.94
HMGB3P20-201ENST00000417997 TMEM218A2RU14 115 aa2.92□□□□□ -1.94
HMGB3P20-201ENST00000417997 A6NDX4 124 aa2.92□□□□□ -1.94
HMGB3P20-201ENST00000417997 RBFOX3A6NFN3 312 aa2.92□□□□□ -1.94
HMGB3P20-201ENST00000417997 A8MZ25 164 aa2.92□□□□□ -1.94
HMGB3P20-201ENST00000417997 SEC14L6B5MCN3 397 aa2.92□□□□□ -1.94
HMGB3P20-201ENST00000417997 OR7C2O60412 319 aa2.92□□□□□ -1.94
HMGB3P20-201ENST00000417997 EIF3GO75821 320 aaKnown RBP eCLIP2.92□□□□□ -1.94
HMGB3P20-201ENST00000417997 OR2J3O76001 311 aa2.92□□□□□ -1.94
HMGB3P20-201ENST00000417997 YIF1AO95070 293 aa2.92□□□□□ -1.94
HMGB3P20-201ENST00000417997 SNAPINO95295 136 aa2.92□□□□□ -1.94
HMGB3P20-201ENST00000417997 CXorf1O96002 111 aa2.92□□□□□ -1.94
HMGB3P20-201ENST00000417997 APOC3P02656 99 aa2.92□□□□□ -1.94
HMGB3P20-201ENST00000417997 OR5G3P0C626 314 aa2.92□□□□□ -1.94
HMGB3P20-201ENST00000417997 ARL14EPLP0DKL9 152 aa2.92□□□□□ -1.94
HMGB3P20-201ENST00000417997 BCL2P10415 239 aa2.92□□□□□ -1.94
HMGB3P20-201ENST00000417997 MDKP21741 143 aaPredicted RBP2.92□□□□□ -1.94
HMGB3P20-201ENST00000417997 S100A7P31151 101 aa2.92□□□□□ -1.94
HMGB3P20-201ENST00000417997 NPBWR1P48145 328 aa2.92□□□□□ -1.94
HMGB3P20-201ENST00000417997 MFAP2P55001 183 aa2.92□□□□□ -1.94
HMGB3P20-201ENST00000417997 MFAP4P55083 255 aa2.92□□□□□ -1.94
HMGB3P20-201ENST00000417997 DSCR10P59022 87 aa2.92□□□□□ -1.94
HMGB3P20-201ENST00000417997 UBE2L3P68036 154 aaKnown RBP2.92□□□□□ -1.94
HMGB3P20-201ENST00000417997 NDPQ00604 133 aa2.92□□□□□ -1.94
HMGB3P20-201ENST00000417997 ZNF726P1Q15940 193 aa2.92□□□□□ -1.94
HMGB3P20-201ENST00000417997 DEFB112Q30KQ8 113 aa2.92□□□□□ -1.94
HMGB3P20-201ENST00000417997 AKIRIN2Q53H80 203 aa2.92□□□□□ -1.94
HMGB3P20-201ENST00000417997 KLF17Q5JT82 389 aaPredicted RBP2.92□□□□□ -1.94
HMGB3P20-201ENST00000417997 ZNF506Q5JVG8 444 aa2.92□□□□□ -1.94
HMGB3P20-201ENST00000417997 C10orf113Q5VZT2 155 aa2.92□□□□□ -1.94
HMGB3P20-201ENST00000417997 PVRIGQ6DKI7 326 aa2.92□□□□□ -1.94
HMGB3P20-201ENST00000417997 KRTAP5-1Q6L8H4 278 aa2.92□□□□□ -1.94
HMGB3P20-201ENST00000417997 C19orf35Q6ZS72 473 aa2.92□□□□□ -1.94
HMGB3P20-201ENST00000417997 SSX7Q7RTT5 188 aa2.92□□□□□ -1.94
HMGB3P20-201ENST00000417997 SLC35E3Q7Z769 313 aa2.92□□□□□ -1.94
HMGB3P20-201ENST00000417997 S100A7AQ86SG5 101 aa2.92□□□□□ -1.94
HMGB3P20-201ENST00000417997 SVBPQ8N300 66 aa2.92□□□□□ -1.94
HMGB3P20-201ENST00000417997 RPP25LQ8N5L8 163 aaKnown RBP2.92□□□□□ -1.94
HMGB3P20-201ENST00000417997 THAP8Q8NA92 274 aa2.92□□□□□ -1.94
HMGB3P20-201ENST00000417997 WFDC11Q8NEX6 87 aa2.92□□□□□ -1.94
HMGB3P20-201ENST00000417997 OR5T1Q8NG75 326 aa2.92□□□□□ -1.94
HMGB3P20-201ENST00000417997 OR1B1Q8NGR6 318 aa2.92□□□□□ -1.94
HMGB3P20-201ENST00000417997 OR4X1Q8NH49 305 aa2.92□□□□□ -1.94
HMGB3P20-201ENST00000417997 SGMS2Q8NHU3 365 aa2.92□□□□□ -1.94
HMGB3P20-201ENST00000417997 LYPD6BQ8NI32 183 aa2.92□□□□□ -1.94
HMGB3P20-201ENST00000417997 RXFP4Q8TDU9 374 aa2.92□□□□□ -1.94
HMGB3P20-201ENST00000417997 MBD3L1Q8WWY6 194 aa2.92□□□□□ -1.94
HMGB3P20-201ENST00000417997 TRGV9Q99603 122 aa2.92□□□□□ -1.94
HMGB3P20-201ENST00000417997 FOXC2Q99958 501 aa2.92□□□□□ -1.94
HMGB3P20-201ENST00000417997 HSPB9Q9BQS6 159 aa2.92□□□□□ -1.94
HMGB3P20-201ENST00000417997 C19orf24Q9BVV8 132 aa2.92□□□□□ -1.94
HMGB3P20-201ENST00000417997 SMDT1Q9H4I9 107 aa2.92□□□□□ -1.94
HMGB3P20-201ENST00000417997 FNDC4Q9H6D8 234 aaPredicted RBP2.92□□□□□ -1.94
HMGB3P20-201ENST00000417997 GNB4Q9HAV0 340 aa2.92□□□□□ -1.94
HMGB3P20-201ENST00000417997 TECRQ9NZ01 308 aaKnown RBP2.92□□□□□ -1.94
HMGB3P20-201ENST00000417997 VAX2Q9UIW0 290 aa2.92□□□□□ -1.94
HMGB3P20-201ENST00000417997 FUT9Q9Y231 359 aa2.92□□□□□ -1.94
HMGB3P20-201ENST00000417997 S4R3C0 116 aa2.92□□□□□ -1.94
HMGB3P20-201ENST00000417997 HRNRQ86YZ3 2850 aaPredicted RBP2.92□□□□□ -1.94
HMGB3P20-201ENST00000417997 PRRC2CQ9Y520 2896 aaKnown RBP2.92□□□□□ -1.94
HMGB3P20-201ENST00000417997 ROS1P08922 2347 aa2.92□□□□□ -1.94
HMGB3P20-201ENST00000417997 IGSF10Q6WRI0 2623 aa2.91□□□□□ -1.94
HMGB3P20-201ENST00000417997 IGLV11-55A0A075B6I3 123 aa2.91□□□□□ -1.94
HMGB3P20-201ENST00000417997 IGLV7-46A0A075B6I9 117 aa2.91□□□□□ -1.94
HMGB3P20-201ENST00000417997 IGKV1OR2-108A0A075B7D4 117 aa2.91□□□□□ -1.94
HMGB3P20-201ENST00000417997 IGLV9-49A0A0B4J1Y8 123 aa2.91□□□□□ -1.94
HMGB3P20-201ENST00000417997 TRAV1-1A0A0B4J248 108 aa2.91□□□□□ -1.94
HMGB3P20-201ENST00000417997 F6UZH7 168 aa2.91□□□□□ -1.94
HMGB3P20-201ENST00000417997 I3L2K1 104 aa2.91□□□□□ -1.94
HMGB3P20-201ENST00000417997 K7EIM0 57 aa2.91□□□□□ -1.94
HMGB3P20-201ENST00000417997 M0R036 132 aa2.91□□□□□ -1.94
HMGB3P20-201ENST00000417997 NUPL2O15504 423 aaKnown RBP2.91□□□□□ -1.94
HMGB3P20-201ENST00000417997 HYPMO75409 117 aa2.91□□□□□ -1.94
HMGB3P20-201ENST00000417997 CLN5O75503 358 aa2.91□□□□□ -1.94
HMGB3P20-201ENST00000417997 IGHV3-23P01764 117 aa2.91□□□□□ -1.94
HMGB3P20-201ENST00000417997 IGHV4-59P01825 116 aa2.91□□□□□ -1.94
HMGB3P20-201ENST00000417997 TRGV3P03979 118 aa2.91□□□□□ -1.94
HMGB3P20-201ENST00000417997 HSPB1P04792 205 aaKnown RBP2.91□□□□□ -1.94
HMGB3P20-201ENST00000417997 CRYGCP07315 174 aa2.91□□□□□ -1.94
HMGB3P20-201ENST00000417997 FRMD6-AS1P0C7T7 363 aa2.91□□□□□ -1.94
HMGB3P20-201ENST00000417997 STAG3L2P0CL84 134 aa2.91□□□□□ -1.94
HMGB3P20-201ENST00000417997 STAG3L3P0CL85 134 aa2.91□□□□□ -1.94
HMGB3P20-201ENST00000417997 ORM2P19652 201 aa2.91□□□□□ -1.94
HMGB3P20-201ENST00000417997 GATA2P23769 480 aaPredicted RBP2.91□□□□□ -1.94
HMGB3P20-201ENST00000417997 GCHFRP30047 84 aa2.91□□□□□ -1.94
HMGB3P20-201ENST00000417997 CAMPP49913 170 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms