RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 PSMB3P49720 205 aa14.11□□□□□ -0.15
RTN4-207ENST00000402434 MEOX2P50222 304 aa14.11□□□□□ -0.15
RTN4-207ENST00000402434 OXA1LQ15070 435 aa14.11□□□□□ -0.15
RTN4-207ENST00000402434 SAMD13Q5VXD3 122 aa14.11□□□□□ -0.15
RTN4-207ENST00000402434 TRPT1Q86TN4 253 aaKnown RBP14.11□□□□□ -0.15
RTN4-207ENST00000402434 STHQ8IWL8 128 aa14.11□□□□□ -0.15
RTN4-207ENST00000402434 RSG1Q9BU20 258 aa14.11□□□□□ -0.15
RTN4-207ENST00000402434 MED28Q9H204 178 aa14.11□□□□□ -0.15
RTN4-207ENST00000402434 ELOA3CA0A087WX78 387 aaPredicted RBP14.1□□□□□ -0.15
RTN4-207ENST00000402434 KNCNA6PVL3 124 aa14.1□□□□□ -0.15
RTN4-207ENST00000402434 ISLRO14498 428 aa14.1□□□□□ -0.15
RTN4-207ENST00000402434 MPDU1O75352 247 aa14.1□□□□□ -0.15
RTN4-207ENST00000402434 ID1P41134 155 aa14.1□□□□□ -0.15
RTN4-207ENST00000402434 DEFB135Q30KP9 77 aa14.1□□□□□ -0.15
RTN4-207ENST00000402434 OR11H7Q8NGC8 314 aa14.1□□□□□ -0.15
RTN4-207ENST00000402434 TMEM37Q8WXS4 190 aa14.1□□□□□ -0.15
RTN4-207ENST00000402434 RNF183Q96D59 192 aa14.1□□□□□ -0.15
RTN4-207ENST00000402434 RNF24Q9Y225 148 aa14.1□□□□□ -0.15
RTN4-207ENST00000402434 SPRY2O43597 315 aa14.09□□□□□ -0.15
RTN4-207ENST00000402434 LYL1P12980 280 aa14.09□□□□□ -0.15
RTN4-207ENST00000402434 RPL7P18124 248 aaKnown RBP14.09□□□□□ -0.15
RTN4-207ENST00000402434 OPCMLQ14982 345 aa14.09□□□□□ -0.15
RTN4-207ENST00000402434 FCN2Q15485 313 aa14.09□□□□□ -0.15
RTN4-207ENST00000402434 ACTL10Q5JWF8 245 aa14.09□□□□□ -0.15
RTN4-207ENST00000402434 MIC13Q5XKP0 118 aa14.09□□□□□ -0.15
RTN4-207ENST00000402434 Q6ZRG5 221 aa14.09□□□□□ -0.15
RTN4-207ENST00000402434 FGF7P21781 194 aa14.08□□□□□ -0.16
RTN4-207ENST00000402434 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.08□□□□□ -0.16
RTN4-207ENST00000402434 LINC00305Q7Z4B0 112 aa14.08□□□□□ -0.16
RTN4-207ENST00000402434 DNAJC4Q9NNZ3 241 aa14.08□□□□□ -0.16
RTN4-207ENST00000402434 SLC39A9Q9NUM3 307 aa14.08□□□□□ -0.16
RTN4-207ENST00000402434 MBD2Q9UBB5 411 aa14.08□□□□□ -0.16
RTN4-207ENST00000402434 COX7A2P2O60397 106 aa14.07□□□□□ -0.16
RTN4-207ENST00000402434 NPCDR1Q9BY65 106 aa14.07□□□□□ -0.16
RTN4-207ENST00000402434 H3BMM0 161 aa14.06□□□□□ -0.16
RTN4-207ENST00000402434 MRPS12O15235 138 aaKnown RBP14.06□□□□□ -0.16
RTN4-207ENST00000402434 GIG44P09565 113 aaPredicted RBP14.06□□□□□ -0.16
RTN4-207ENST00000402434 RPL12P30050 165 aaKnown RBP14.06□□□□□ -0.16
RTN4-207ENST00000402434 B2MP61769 119 aa14.06□□□□□ -0.16
RTN4-207ENST00000402434 CLINT1Q14677 625 aa14.06□□□□□ -0.16
RTN4-207ENST00000402434 C10orf113Q5VZT2 155 aa14.06□□□□□ -0.16
RTN4-207ENST00000402434 MORN3Q6PF18 240 aaPredicted RBP14.06□□□□□ -0.16
RTN4-207ENST00000402434 MUC7Q8TAX7 377 aa14.06□□□□□ -0.16
RTN4-207ENST00000402434 LINC00052Q96N35 136 aa14.06□□□□□ -0.16
RTN4-207ENST00000402434 HSPB11Q9Y547 144 aa14.06□□□□□ -0.16
RTN4-207ENST00000402434 A0A087X0K7 114 aa14.06□□□□□ -0.16
RTN4-207ENST00000402434 CA1P00915 261 aaPredicted RBP14.06□□□□□ -0.16
RTN4-207ENST00000402434 SPP1P10451 314 aa14.06□□□□□ -0.16
RTN4-207ENST00000402434 THAP6Q8TBB0 222 aa14.06□□□□□ -0.16
RTN4-207ENST00000402434 GATAD1Q8WUU5 269 aa14.06□□□□□ -0.16
RTN4-207ENST00000402434 C16orf92Q96LL3 132 aa14.06□□□□□ -0.16
RTN4-207ENST00000402434 PXMP4Q9Y6I8 212 aa14.06□□□□□ -0.16
RTN4-207ENST00000402434 C3orf84H3BNL1 204 aa14.05□□□□□ -0.16
RTN4-207ENST00000402434 HLA-DRB4P13762 266 aa14.05□□□□□ -0.16
RTN4-207ENST00000402434 ATF4P18848 351 aaPredicted RBP14.05□□□□□ -0.16
RTN4-207ENST00000402434 TMEM41BQ5BJD5 291 aa14.05□□□□□ -0.16
RTN4-207ENST00000402434 MORN5Q5VZ52 161 aa14.05□□□□□ -0.16
RTN4-207ENST00000402434 FOXI2Q6ZQN5 318 aa14.05□□□□□ -0.16
RTN4-207ENST00000402434 OR1L4Q8NGR5 311 aa14.05□□□□□ -0.16
RTN4-207ENST00000402434 ASB13Q8WXK3 278 aa14.05□□□□□ -0.16
RTN4-207ENST00000402434 PFDN5Q99471 154 aa14.05□□□□□ -0.16
RTN4-207ENST00000402434 ATP5SQ99766 215 aa14.05□□□□□ -0.16
RTN4-207ENST00000402434 WDR61Q9GZS3 305 aaKnown RBP14.05□□□□□ -0.16
RTN4-207ENST00000402434 SAV1Q9H4B6 383 aaPredicted RBP14.05□□□□□ -0.16
RTN4-207ENST00000402434 HLA-DRB4X5D2U9 266 aa14.05□□□□□ -0.16
RTN4-207ENST00000402434 C20orf173Q96LM9 149 aa14.04□□□□□ -0.16
RTN4-207ENST00000402434 CLUHP3Q96NS8 147 aa14.04□□□□□ -0.16
RTN4-207ENST00000402434 TRAV8-2A0A0B4J237 113 aa14.03□□□□□ -0.16
RTN4-207ENST00000402434 GIPP09681 153 aaPredicted RBP14.03□□□□□ -0.16
RTN4-207ENST00000402434 DEFB1P60022 68 aa14.03□□□□□ -0.16
RTN4-207ENST00000402434 GDF5OSQ5U4N7 250 aa14.03□□□□□ -0.16
RTN4-207ENST00000402434 SPATA31B1PQ5VZV4 182 aa14.03□□□□□ -0.16
RTN4-207ENST00000402434 BPIFA4PQ86YQ2 179 aa14.03□□□□□ -0.16
RTN4-207ENST00000402434 RPRMQ9NS64 109 aa14.03□□□□□ -0.16
RTN4-207ENST00000402434 DNAH7Q8WXX0 4024 aa14.03□□□□□ -0.16
RTN4-207ENST00000402434 C4BPBP20851 252 aa14.02□□□□□ -0.16
RTN4-207ENST00000402434 NUTF2P61970 127 aaKnown RBP14.01□□□□□ -0.17
RTN4-207ENST00000402434 FGL1Q08830 312 aa14.01□□□□□ -0.17
RTN4-207ENST00000402434 CSNK1G2-AS1Q8NCQ2 148 aa14.01□□□□□ -0.17
RTN4-207ENST00000402434 A0A0J9YX75 114 aa14□□□□□ -0.17
RTN4-207ENST00000402434 CXCL2P19875 107 aa14□□□□□ -0.17
RTN4-207ENST00000402434 Q5BKY6 102 aa14□□□□□ -0.17
RTN4-207ENST00000402434 IGFL4Q6B9Z1 124 aa14□□□□□ -0.17
RTN4-207ENST00000402434 EBLN2Q6P2I7 272 aa14□□□□□ -0.17
RTN4-207ENST00000402434 ZNF709Q8N972 641 aa14□□□□□ -0.17
RTN4-207ENST00000402434 RARRES2Q99969 163 aa14□□□□□ -0.17
RTN4-207ENST00000402434 HRH4Q9H3N8 390 aa14□□□□□ -0.17
RTN4-207ENST00000402434 KCNIP2Q9NS61 270 aa14□□□□□ -0.17
RTN4-207ENST00000402434 TRAV5A0A0B4J249 113 aa13.99□□□□□ -0.17
RTN4-207ENST00000402434 IGLC2P0DOY2 106 aa13.99□□□□□ -0.17
RTN4-207ENST00000402434 GCSAMLQ5JQS6 135 aa13.99□□□□□ -0.17
RTN4-207ENST00000402434 OR11H2Q8NH07 326 aa13.99□□□□□ -0.17
RTN4-207ENST00000402434 PARD6GQ9BYG4 376 aaPredicted RBP13.99□□□□□ -0.17
RTN4-207ENST00000402434 SMIM3Q9BZL3 60 aa13.99□□□□□ -0.17
RTN4-207ENST00000402434 F6UB75 175 aa13.99□□□□□ -0.17
RTN4-207ENST00000402434 CASC10Q5T4H9 136 aa13.99□□□□□ -0.17
RTN4-207ENST00000402434 LCN15Q6UWW0 184 aa13.99□□□□□ -0.17
RTN4-207ENST00000402434 RNF182Q8N6D2 247 aa13.99□□□□□ -0.17
RTN4-207ENST00000402434 AQP10Q96PS8 301 aa13.99□□□□□ -0.17
RTN4-207ENST00000402434 C1QTNF4Q9BXJ3 329 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 141.7 ms