RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 PBDC1Q9BVG4 233 aa11.83□□□□□ -0.52
CLTA-203ENST00000396603 TMEM147Q9BVK8 224 aa11.83□□□□□ -0.52
CLTA-203ENST00000396603 UQCC1Q9NVA1 299 aa11.83□□□□□ -0.52
CLTA-203ENST00000396603 U3KQE9 123 aa11.83□□□□□ -0.52
CLTA-203ENST00000396603 TRAV10A0A0B4J240 114 aa11.82□□□□□ -0.52
CLTA-203ENST00000396603 IGHV4-28A0A0C4DH34 117 aa11.82□□□□□ -0.52
CLTA-203ENST00000396603 IGHV3-66A0A0C4DH42 116 aa11.82□□□□□ -0.52
CLTA-203ENST00000396603 CCNKO75909 580 aa11.82□□□□□ -0.52
CLTA-203ENST00000396603 GIPP09681 153 aaPredicted RBP11.82□□□□□ -0.52
CLTA-203ENST00000396603 RAP2BP61225 183 aa11.82□□□□□ -0.52
CLTA-203ENST00000396603 LYZP61626 148 aa11.82□□□□□ -0.52
CLTA-203ENST00000396603 CYP2G1PQ6ZSU1 146 aa11.82□□□□□ -0.52
CLTA-203ENST00000396603 ZNF546Q86UE3 836 aa11.82□□□□□ -0.52
CLTA-203ENST00000396603 STXBP6Q8NFX7 210 aa11.82□□□□□ -0.52
CLTA-203ENST00000396603 C1QTNF4Q9BXJ3 329 aa11.82□□□□□ -0.52
CLTA-203ENST00000396603 OR5AC2Q9NZP5 309 aa11.82□□□□□ -0.52
CLTA-203ENST00000396603 SLC45A2Q9UMX9 530 aa11.82□□□□□ -0.52
CLTA-203ENST00000396603 RNF24Q9Y225 148 aa11.82□□□□□ -0.52
CLTA-203ENST00000396603 IGKV1OR2-108A0A075B7D4 117 aa11.81□□□□□ -0.52
CLTA-203ENST00000396603 IGSF23A1L1A6 192 aa11.81□□□□□ -0.52
CLTA-203ENST00000396603 IGLL5B9A064 214 aa11.81□□□□□ -0.52
CLTA-203ENST00000396603 DEFB4AO15263 64 aa11.81□□□□□ -0.52
CLTA-203ENST00000396603 RBMY1A1P0DJD3 496 aaKnown RBP11.81□□□□□ -0.52
CLTA-203ENST00000396603 RBMY1CP0DJD4 496 aa11.81□□□□□ -0.52
CLTA-203ENST00000396603 CXCL3P19876 107 aa11.81□□□□□ -0.52
CLTA-203ENST00000396603 NUTF2P61970 127 aaKnown RBP11.81□□□□□ -0.52
CLTA-203ENST00000396603 PRR20EP86478 221 aa11.81□□□□□ -0.52
CLTA-203ENST00000396603 PRR20CP86479 221 aa11.81□□□□□ -0.52
CLTA-203ENST00000396603 PRR20DP86480 221 aa11.81□□□□□ -0.52
CLTA-203ENST00000396603 PRR20BP86481 221 aa11.81□□□□□ -0.52
CLTA-203ENST00000396603 PRR20AP86496 221 aa11.81□□□□□ -0.52
CLTA-203ENST00000396603 ARL16Q0P5N6 197 aa11.81□□□□□ -0.52
CLTA-203ENST00000396603 OR2F1Q13607 317 aa11.81□□□□□ -0.52
CLTA-203ENST00000396603 RBMY1FQ15415 496 aaKnown RBP11.81□□□□□ -0.52
CLTA-203ENST00000396603 PXDC1Q5TGL8 231 aa11.81□□□□□ -0.52
CLTA-203ENST00000396603 LINC00336Q6ZUF6 198 aa11.81□□□□□ -0.52
CLTA-203ENST00000396603 CSNK1G2-AS1Q8NCQ2 148 aa11.81□□□□□ -0.52
CLTA-203ENST00000396603 OR11H7Q8NGC8 314 aa11.81□□□□□ -0.52
CLTA-203ENST00000396603 PPP1R14BQ96C90 147 aa11.81□□□□□ -0.52
CLTA-203ENST00000396603 RNF126Q9BV68 326 aa11.81□□□□□ -0.52
CLTA-203ENST00000396603 X6R8D5 127 aa11.81□□□□□ -0.52
CLTA-203ENST00000396603 MPDU1O75352 247 aa11.8□□□□□ -0.52
CLTA-203ENST00000396603 ZNF688P0C7X2 276 aa11.8□□□□□ -0.52
CLTA-203ENST00000396603 HLA-DMBP28068 263 aa11.8□□□□□ -0.52
CLTA-203ENST00000396603 USF2Q15853 346 aaPredicted RBP11.8□□□□□ -0.52
CLTA-203ENST00000396603 C16orf54Q6UWD8 224 aa11.8□□□□□ -0.52
CLTA-203ENST00000396603 MBD2Q9UBB5 411 aa11.8□□□□□ -0.52
CLTA-203ENST00000396603 H0YIZ8 118 aa11.79□□□□□ -0.52
CLTA-203ENST00000396603 AMBPP02760 352 aa11.79□□□□□ -0.52
CLTA-203ENST00000396603 C4BPBP20851 252 aa11.79□□□□□ -0.52
CLTA-203ENST00000396603 SNRPD3P62318 126 aaKnown RBP11.79□□□□□ -0.52
CLTA-203ENST00000396603 VWC2Q2TAL6 325 aa11.79□□□□□ -0.52
CLTA-203ENST00000396603 C1orf194Q5T5A4 169 aa11.79□□□□□ -0.52
CLTA-203ENST00000396603 GLMPQ8WWB7 406 aa11.79□□□□□ -0.52
CLTA-203ENST00000396603 KRTAP17-1Q9BYP8 105 aa11.79□□□□□ -0.52
CLTA-203ENST00000396603 AGPAT2O15120 278 aa11.78□□□□□ -0.52
CLTA-203ENST00000396603 LINC00869P0C866 280 aa11.78□□□□□ -0.52
CLTA-203ENST00000396603 RPL12P30050 165 aaKnown RBP11.78□□□□□ -0.52
CLTA-203ENST00000396603 Q6ZTC4 211 aa11.78□□□□□ -0.52
CLTA-203ENST00000396603 OR5C1Q8NGR4 320 aa11.78□□□□□ -0.52
CLTA-203ENST00000396603 KCNIP2Q9NS61 270 aa11.78□□□□□ -0.52
CLTA-203ENST00000396603 WDR83OSQ9Y284 106 aa11.78□□□□□ -0.52
CLTA-203ENST00000396603 FAT2Q9NYQ8 4349 aa11.77□□□□□ -0.52
CLTA-203ENST00000396603 DNAH2Q9P225 4427 aa11.77□□□□□ -0.53
CLTA-203ENST00000396603 IGHV4-4A0A075B6R2 117 aa11.77□□□□□ -0.53
CLTA-203ENST00000396603 UBE2L5PA0A1B0GUS4 154 aa11.77□□□□□ -0.53
CLTA-203ENST00000396603 HYPMO75409 117 aa11.77□□□□□ -0.53
CLTA-203ENST00000396603 ORM2P19652 201 aa11.77□□□□□ -0.53
CLTA-203ENST00000396603 CAMLGP49069 296 aa11.77□□□□□ -0.53
CLTA-203ENST00000396603 PLP1P60201 277 aa11.77□□□□□ -0.53
CLTA-203ENST00000396603 ACTL10Q5JWF8 245 aa11.77□□□□□ -0.53
CLTA-203ENST00000396603 Q6ZRG5 221 aa11.77□□□□□ -0.53
CLTA-203ENST00000396603 OR1B1Q8NGR6 318 aa11.77□□□□□ -0.53
CLTA-203ENST00000396603 HSPB11Q9Y547 144 aa11.77□□□□□ -0.53
CLTA-203ENST00000396603 ELOA3CA0A087WX78 387 aaPredicted RBP11.76□□□□□ -0.53
CLTA-203ENST00000396603 KNCNA6PVL3 124 aa11.76□□□□□ -0.53
CLTA-203ENST00000396603 BUB3O43684 328 aa11.76□□□□□ -0.53
CLTA-203ENST00000396603 FGF7P21781 194 aa11.76□□□□□ -0.53
CLTA-203ENST00000396603 NHLH2Q02577 135 aa11.76□□□□□ -0.53
CLTA-203ENST00000396603 PSMG4Q5JS54 123 aa11.76□□□□□ -0.53
CLTA-203ENST00000396603 ZNF709Q8N972 641 aa11.76□□□□□ -0.53
CLTA-203ENST00000396603 CHAC2Q8WUX2 184 aa11.76□□□□□ -0.53
CLTA-203ENST00000396603 GPR82Q96P67 336 aa11.76□□□□□ -0.53
CLTA-203ENST00000396603 NEU1Q99519 415 aa11.76□□□□□ -0.53
CLTA-203ENST00000396603 NRN1Q9NPD7 142 aa11.76□□□□□ -0.53
CLTA-203ENST00000396603 HIGD1AQ9Y241 93 aa11.76□□□□□ -0.53
CLTA-203ENST00000396603 IFNA5P01569 189 aa11.75□□□□□ -0.53
CLTA-203ENST00000396603 OR5G3P0C626 314 aa11.75□□□□□ -0.53
CLTA-203ENST00000396603 P0DMU3 169 aa11.75□□□□□ -0.53
CLTA-203ENST00000396603 FAM231AP0DMU4 169 aa11.75□□□□□ -0.53
CLTA-203ENST00000396603 FAM231CP0DMU5 169 aa11.75□□□□□ -0.53
CLTA-203ENST00000396603 CLINT1Q14677 625 aa11.75□□□□□ -0.53
CLTA-203ENST00000396603 SAMD13Q5VXD3 122 aa11.75□□□□□ -0.53
CLTA-203ENST00000396603 SIGLEC15Q6ZMC9 328 aa11.75□□□□□ -0.53
CLTA-203ENST00000396603 OR8I2Q8N0Y5 310 aa11.75□□□□□ -0.53
CLTA-203ENST00000396603 INO80EQ8NBZ0 244 aaPredicted RBP11.75□□□□□ -0.53
CLTA-203ENST00000396603 OR2T35Q8NGX2 323 aa11.75□□□□□ -0.53
CLTA-203ENST00000396603 MGST2Q99735 147 aa11.75□□□□□ -0.53
CLTA-203ENST00000396603 ATP5SQ99766 215 aa11.75□□□□□ -0.53
CLTA-203ENST00000396603 DNAH17Q9UFH2 4485 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms