RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 ATAD5Q96QE3 1844 aa3.3□□□□□ -1.88
GABPB1-204ENST00000396464 KIAA1671Q9BY89 1806 aa3.3□□□□□ -1.88
GABPB1-204ENST00000396464 KCPQ6ZWJ8 1503 aa3.3□□□□□ -1.88
GABPB1-204ENST00000396464 SCN7AQ01118 1682 aa3.3□□□□□ -1.88
GABPB1-204ENST00000396464 C4AP0C0L4 1744 aa3.29□□□□□ -1.88
GABPB1-204ENST00000396464 NUP188Q5SRE5 1749 aa3.29□□□□□ -1.88
GABPB1-204ENST00000396464 DOCK8Q8NF50 2099 aa3.29□□□□□ -1.88
GABPB1-204ENST00000396464 SLC25A20O43772 301 aa3.29□□□□□ -1.88
GABPB1-204ENST00000396464 IGKV1-16P04430 117 aa3.29□□□□□ -1.88
GABPB1-204ENST00000396464 RPL22P35268 128 aaKnown RBP3.29□□□□□ -1.88
GABPB1-204ENST00000396464 CRIP2P52943 208 aaPredicted RBP3.29□□□□□ -1.88
GABPB1-204ENST00000396464 KRTAP10-12P60413 245 aa3.29□□□□□ -1.88
GABPB1-204ENST00000396464 UBE2BP63146 152 aa3.29□□□□□ -1.88
GABPB1-204ENST00000396464 RHOGP84095 191 aa3.29□□□□□ -1.88
GABPB1-204ENST00000396464 KISS1Q15726 138 aa3.29□□□□□ -1.88
GABPB1-204ENST00000396464 C10orf91Q5T1B1 145 aa3.29□□□□□ -1.88
GABPB1-204ENST00000396464 BPIFA4PQ86YQ2 179 aa3.29□□□□□ -1.88
GABPB1-204ENST00000396464 MMGT1Q8N4V1 131 aa3.29□□□□□ -1.88
GABPB1-204ENST00000396464 ZNF355PQ9NSJ1 428 aa3.29□□□□□ -1.88
GABPB1-204ENST00000396464 MARCOQ9UEW3 520 aaPredicted RBP3.29□□□□□ -1.88
GABPB1-204ENST00000396464 NOTCH3Q9UM47 2321 aa3.29□□□□□ -1.88
GABPB1-204ENST00000396464 BCORQ6W2J9 1755 aa3.29□□□□□ -1.88
GABPB1-204ENST00000396464 RREB1Q92766 1687 aa3.29□□□□□ -1.88
GABPB1-204ENST00000396464 CDK5RAP2Q96SN8 1893 aa3.29□□□□□ -1.88
GABPB1-204ENST00000396464 N4BP2Q86UW6 1770 aaPredicted RBP3.28□□□□□ -1.88
GABPB1-204ENST00000396464 A0A087X0T9 212 aa3.28□□□□□ -1.88
GABPB1-204ENST00000396464 TRAV13-1A0A0B4J241 112 aa3.28□□□□□ -1.88
GABPB1-204ENST00000396464 SPAARA0A1B0GVQ0 90 aa3.28□□□□□ -1.88
GABPB1-204ENST00000396464 MEIS3P1A6NDR6 274 aa3.28□□□□□ -1.88
GABPB1-204ENST00000396464 ZNF670-ZNF695F2Z2N8 137 aa3.28□□□□□ -1.88
GABPB1-204ENST00000396464 LECT2O14960 151 aa3.28□□□□□ -1.88
GABPB1-204ENST00000396464 SH2D1AO60880 128 aa3.28□□□□□ -1.88
GABPB1-204ENST00000396464 NDUFB2O95178 105 aa3.28□□□□□ -1.88
GABPB1-204ENST00000396464 DYNLT3P51808 116 aa3.28□□□□□ -1.88
GABPB1-204ENST00000396464 FOXA3P55318 350 aaPredicted RBP3.28□□□□□ -1.88
GABPB1-204ENST00000396464 ARPP19P56211 112 aa3.28□□□□□ -1.88
GABPB1-204ENST00000396464 YPEL3P61236 119 aaPredicted RBP3.28□□□□□ -1.88
GABPB1-204ENST00000396464 HBBP68871 147 aa3.28□□□□□ -1.88
GABPB1-204ENST00000396464 IGLV3-21P80748 117 aaPredicted RBP3.28□□□□□ -1.88
GABPB1-204ENST00000396464 C15orf32Q32M92 178 aa3.28□□□□□ -1.88
GABPB1-204ENST00000396464 SPANXN3Q5MJ09 141 aa3.28□□□□□ -1.88
GABPB1-204ENST00000396464 TEX261Q6UWH6 196 aa3.28□□□□□ -1.88
GABPB1-204ENST00000396464 SNX29P2Q8IUI4 249 aa3.28□□□□□ -1.88
GABPB1-204ENST00000396464 C11orf42Q8N5U0 333 aa3.28□□□□□ -1.88
GABPB1-204ENST00000396464 IMMP1LQ96LU5 166 aa3.28□□□□□ -1.88
GABPB1-204ENST00000396464 PLA2G2FQ9BZM2 168 aa3.28□□□□□ -1.88
GABPB1-204ENST00000396464 OR5V1Q9UGF6 321 aa3.28□□□□□ -1.88
GABPB1-204ENST00000396464 FOCADQ5VW36 1801 aa3.28□□□□□ -1.88
GABPB1-204ENST00000396464 TUBGCP6Q96RT7 1819 aa3.28□□□□□ -1.88
GABPB1-204ENST00000396464 NUP205Q92621 2012 aa3.28□□□□□ -1.88
GABPB1-204ENST00000396464 CICQ96RK0 1608 aaPredicted RBP3.28□□□□□ -1.88
GABPB1-204ENST00000396464 ZNF831Q5JPB2 1677 aa3.28□□□□□ -1.89
GABPB1-204ENST00000396464 FAM236AA0A1B0GUQ0 79 aa3.27□□□□□ -1.89
GABPB1-204ENST00000396464 FAM236BA0A1B0GV22 79 aa3.27□□□□□ -1.89
GABPB1-204ENST00000396464 ZNF727A8MUV8 499 aa3.27□□□□□ -1.89
GABPB1-204ENST00000396464 H3BMM0 161 aa3.27□□□□□ -1.89
GABPB1-204ENST00000396464 CCL25O15444 150 aa3.27□□□□□ -1.89
GABPB1-204ENST00000396464 NCR2O95944 276 aa3.27□□□□□ -1.89
GABPB1-204ENST00000396464 C1QAP02745 245 aa3.27□□□□□ -1.89
GABPB1-204ENST00000396464 SLC25A16P16260 332 aa3.27□□□□□ -1.89
GABPB1-204ENST00000396464 CRHBPP24387 322 aa3.27□□□□□ -1.89
GABPB1-204ENST00000396464 RNASE4P34096 147 aaKnown RBP3.27□□□□□ -1.89
GABPB1-204ENST00000396464 RPS10P46783 165 aaKnown RBP3.27□□□□□ -1.89
GABPB1-204ENST00000396464 FXYD7P58549 80 aa3.27□□□□□ -1.89
GABPB1-204ENST00000396464 HES1Q14469 280 aa3.27□□□□□ -1.89
GABPB1-204ENST00000396464 ZNF322Q6U7Q0 402 aaPredicted RBP3.27□□□□□ -1.89
GABPB1-204ENST00000396464 ZFP2Q6ZN57 461 aa3.27□□□□□ -1.89
GABPB1-204ENST00000396464 TRAPPC6BQ86SZ2 158 aa3.27□□□□□ -1.89
GABPB1-204ENST00000396464 C10orf126Q8N4M7 172 aa3.27□□□□□ -1.89
GABPB1-204ENST00000396464 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.27□□□□□ -1.89
GABPB1-204ENST00000396464 UBE2WQ96B02 151 aa3.27□□□□□ -1.89
GABPB1-204ENST00000396464 SDF2Q99470 211 aa3.27□□□□□ -1.89
GABPB1-204ENST00000396464 MGLLQ99685 303 aa3.27□□□□□ -1.89
GABPB1-204ENST00000396464 UPK3BQ9BT76 320 aa3.27□□□□□ -1.89
GABPB1-204ENST00000396464 ADAT1Q9BUB4 502 aaKnown RBP3.27□□□□□ -1.89
GABPB1-204ENST00000396464 XAGE1AQ9HD64 81 aa3.27□□□□□ -1.89
GABPB1-204ENST00000396464 OSTCQ9NRP0 149 aa3.27□□□□□ -1.89
GABPB1-204ENST00000396464 SOX21Q9Y651 276 aaPredicted RBP3.27□□□□□ -1.89
GABPB1-204ENST00000396464 U3KQK5 164 aa3.27□□□□□ -1.89
GABPB1-204ENST00000396464 PXDNLA1KZ92 1463 aa3.27□□□□□ -1.89
GABPB1-204ENST00000396464 CASZ1Q86V15 1759 aa3.27□□□□□ -1.89
GABPB1-204ENST00000396464 DENND4CQ5VZ89 1909 aa3.27□□□□□ -1.89
GABPB1-204ENST00000396464 TDRD6O60522 2096 aaKnown RBP3.27□□□□□ -1.89
GABPB1-204ENST00000396464 NUP98P52948 1817 aa3.27□□□□□ -1.89
GABPB1-204ENST00000396464 UBR3Q6ZT12 1888 aa3.27□□□□□ -1.89
GABPB1-204ENST00000396464 DDX60Q8IY21 1712 aaKnown RBP3.27□□□□□ -1.89
GABPB1-204ENST00000396464 C19orf71A6NCJ1 209 aa3.27□□□□□ -1.89
GABPB1-204ENST00000396464 IFNA17P01571 189 aa3.27□□□□□ -1.89
GABPB1-204ENST00000396464 APODP05090 189 aa3.27□□□□□ -1.89
GABPB1-204ENST00000396464 ZNF286BP0CG31 522 aa3.27□□□□□ -1.89
GABPB1-204ENST00000396464 CCL5P13501 91 aa3.27□□□□□ -1.89
GABPB1-204ENST00000396464 NOVP48745 357 aa3.27□□□□□ -1.89
GABPB1-204ENST00000396464 PKIAP61925 76 aa3.27□□□□□ -1.89
GABPB1-204ENST00000396464 DIAPH2-AS1Q14236 149 aa3.27□□□□□ -1.89
GABPB1-204ENST00000396464 LDLRAD2Q5SZI1 272 aa3.27□□□□□ -1.89
GABPB1-204ENST00000396464 DEFB132Q7Z7B7 95 aa3.27□□□□□ -1.89
GABPB1-204ENST00000396464 C8orf59Q8N0T1 100 aaPredicted RBP3.27□□□□□ -1.89
GABPB1-204ENST00000396464 ACBD7Q8N6N7 88 aa3.27□□□□□ -1.89
GABPB1-204ENST00000396464 CNEP1R1Q8N9A8 125 aa3.27□□□□□ -1.89
GABPB1-204ENST00000396464 PP6455Q8WZ26 134 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms