RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 GNG7O60262 68 aa11.74□□□□□ -0.53
SCAF11-204ENST00000395454 BRI3O95415 125 aa11.74□□□□□ -0.53
SCAF11-204ENST00000395454 UNQ5815/PRO19632Q6UWF5 114 aa11.74□□□□□ -0.53
SCAF11-204ENST00000395454 OCC1Q8TAD7 63 aa11.74□□□□□ -0.53
SCAF11-204ENST00000395454 IGF2BP2-AS1Q96M15 143 aa11.74□□□□□ -0.53
SCAF11-204ENST00000395454 ATP6V0BQ99437 205 aa11.74□□□□□ -0.53
SCAF11-204ENST00000395454 TGIF2-C20orf24A0A0A6YYL0 155 aa11.73□□□□□ -0.53
SCAF11-204ENST00000395454 TGOLN2O43493 480 aa11.73□□□□□ -0.53
SCAF11-204ENST00000395454 OR2J3O76001 311 aa11.73□□□□□ -0.53
SCAF11-204ENST00000395454 TEX38Q6PEX7 206 aa11.73□□□□□ -0.53
SCAF11-204ENST00000395454 Q6ZSV7 163 aa11.73□□□□□ -0.53
SCAF11-204ENST00000395454 ZNF502Q8TBZ5 544 aa11.73□□□□□ -0.53
SCAF11-204ENST00000395454 ZNF702PQ9H963 129 aa11.73□□□□□ -0.53
SCAF11-204ENST00000395454 FBXL7Q9UJT9 491 aa11.73□□□□□ -0.53
SCAF11-204ENST00000395454 URGCP-MRPS24S4R325 110 aa11.73□□□□□ -0.53
SCAF11-204ENST00000395454 HELTA6NFD8 242 aa11.72□□□□□ -0.53
SCAF11-204ENST00000395454 PGPEP1LA6NFU8 196 aa11.72□□□□□ -0.53
SCAF11-204ENST00000395454 LINC01548A6NM66 108 aa11.72□□□□□ -0.53
SCAF11-204ENST00000395454 K7EN84 100 aa11.72□□□□□ -0.53
SCAF11-204ENST00000395454 IGF1P05019 195 aa11.72□□□□□ -0.53
SCAF11-204ENST00000395454 NBEAP1P0C6P0 100 aa11.72□□□□□ -0.53
SCAF11-204ENST00000395454 TMEM95Q3KNT9 176 aa11.72□□□□□ -0.53
SCAF11-204ENST00000395454 ZNF600Q6ZNG1 722 aa11.72□□□□□ -0.53
SCAF11-204ENST00000395454 SFRP2Q96HF1 295 aa11.72□□□□□ -0.53
SCAF11-204ENST00000395454 ZNF414Q96IQ9 312 aa11.72□□□□□ -0.53
SCAF11-204ENST00000395454 FBN1P35555 2871 aaKnown RBP11.72□□□□□ -0.53
SCAF11-204ENST00000395454 GGCTO75223 188 aaKnown RBP11.72□□□□□ -0.53
SCAF11-204ENST00000395454 SCGB2A1O75556 95 aa11.72□□□□□ -0.53
SCAF11-204ENST00000395454 IGHG2P01859 326 aa11.72□□□□□ -0.53
SCAF11-204ENST00000395454 CTSGP08311 255 aa11.72□□□□□ -0.53
SCAF11-204ENST00000395454 TAS2R60P59551 318 aa11.72□□□□□ -0.53
SCAF11-204ENST00000395454 CENPWQ5EE01 88 aa11.72□□□□□ -0.53
SCAF11-204ENST00000395454 S100A7AQ86SG5 101 aa11.72□□□□□ -0.53
SCAF11-204ENST00000395454 NECAP1Q8NC96 275 aa11.72□□□□□ -0.53
SCAF11-204ENST00000395454 FAM210BQ96KR6 192 aa11.72□□□□□ -0.53
SCAF11-204ENST00000395454 LINC00527Q9UJ94 153 aa11.72□□□□□ -0.53
SCAF11-204ENST00000395454 ZNF580Q9UK33 172 aa11.72□□□□□ -0.53
SCAF11-204ENST00000395454 MRPS12O15235 138 aaKnown RBP11.71□□□□□ -0.53
SCAF11-204ENST00000395454 HIST1H1EP10412 219 aaKnown RBP11.71□□□□□ -0.53
SCAF11-204ENST00000395454 GALR1P47211 349 aa11.71□□□□□ -0.53
SCAF11-204ENST00000395454 ECSCRQ19T08 205 aa11.71□□□□□ -0.53
SCAF11-204ENST00000395454 GAR1Q9NY12 217 aaKnown RBP11.71□□□□□ -0.53
SCAF11-204ENST00000395454 RNF24Q9Y225 148 aa11.71□□□□□ -0.53
SCAF11-204ENST00000395454 KLF12Q9Y4X4 402 aa11.71□□□□□ -0.53
SCAF11-204ENST00000395454 PEX7O00628 323 aa11.7□□□□□ -0.54
SCAF11-204ENST00000395454 IGLV2-8P01709 118 aa11.7□□□□□ -0.54
SCAF11-204ENST00000395454 IL4P05112 153 aa11.7□□□□□ -0.54
SCAF11-204ENST00000395454 IGLC2P0DOY2 106 aa11.7□□□□□ -0.54
SCAF11-204ENST00000395454 ADMP35318 185 aa11.7□□□□□ -0.54
SCAF11-204ENST00000395454 GNG4P50150 75 aa11.7□□□□□ -0.54
SCAF11-204ENST00000395454 RHOGP84095 191 aa11.7□□□□□ -0.54
SCAF11-204ENST00000395454 FOXL1Q12952 345 aa11.7□□□□□ -0.54
SCAF11-204ENST00000395454 USF2Q15853 346 aaPredicted RBP11.7□□□□□ -0.54
SCAF11-204ENST00000395454 C15orf32Q32M92 178 aa11.7□□□□□ -0.54
SCAF11-204ENST00000395454 Q56UQ5 140 aa11.7□□□□□ -0.54
SCAF11-204ENST00000395454 OR5B12Q96R08 314 aa11.7□□□□□ -0.54
SCAF11-204ENST00000395454 G3V318 75 aa11.7□□□□□ -0.54
SCAF11-204ENST00000395454 TYMSP04818 313 aa11.7□□□□□ -0.54
SCAF11-204ENST00000395454 S100PP25815 95 aa11.7□□□□□ -0.54
SCAF11-204ENST00000395454 Q8N2B8 174 aa11.7□□□□□ -0.54
SCAF11-204ENST00000395454 NOL4LQ96MY1 436 aaPredicted RBP11.7□□□□□ -0.54
SCAF11-204ENST00000395454 TRAV41A0A0B4J266 112 aa11.69□□□□□ -0.54
SCAF11-204ENST00000395454 PHOX2AO14813 284 aa11.69□□□□□ -0.54
SCAF11-204ENST00000395454 GCGP01275 180 aa11.69□□□□□ -0.54
SCAF11-204ENST00000395454 LEMD1Q68G75 181 aa11.69□□□□□ -0.54
SCAF11-204ENST00000395454 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.69□□□□□ -0.54
SCAF11-204ENST00000395454 C5orf17Q8NAS9 161 aa11.69□□□□□ -0.54
SCAF11-204ENST00000395454 SMIM12Q96EX1 92 aa11.69□□□□□ -0.54
SCAF11-204ENST00000395454 BIN3Q9NQY0 253 aa11.69□□□□□ -0.54
SCAF11-204ENST00000395454 ZNF586Q9NXT0 402 aa11.69□□□□□ -0.54
SCAF11-204ENST00000395454 EPDR1Q9UM22 224 aa11.69□□□□□ -0.54
SCAF11-204ENST00000395454 S4R3C0 116 aa11.69□□□□□ -0.54
SCAF11-204ENST00000395454 AP4M1O00189 453 aa11.68□□□□□ -0.54
SCAF11-204ENST00000395454 RPS10P46783 165 aaKnown RBP11.68□□□□□ -0.54
SCAF11-204ENST00000395454 BPIFA4PQ86YQ2 179 aa11.68□□□□□ -0.54
SCAF11-204ENST00000395454 OTORQ9NRC9 128 aa11.68□□□□□ -0.54
SCAF11-204ENST00000395454 AURKAIP1Q9NWT8 199 aaPredicted RBP11.68□□□□□ -0.54
SCAF11-204ENST00000395454 TRBV7-1A0A0A6YYK4 115 aa11.68□□□□□ -0.54
SCAF11-204ENST00000395454 OR2T8A6NH00 312 aa11.68□□□□□ -0.54
SCAF11-204ENST00000395454 ZNF98A6NK75 572 aa11.68□□□□□ -0.54
SCAF11-204ENST00000395454 H3BUA1 57 aa11.68□□□□□ -0.54
SCAF11-204ENST00000395454 CNN1P51911 297 aaKnown RBP11.68□□□□□ -0.54
SCAF11-204ENST00000395454 RANP62826 216 aaKnown RBP11.68□□□□□ -0.54
SCAF11-204ENST00000395454 TMEM183BQ1AE95 376 aa11.68□□□□□ -0.54
SCAF11-204ENST00000395454 ZFP82Q8N141 532 aa11.68□□□□□ -0.54
SCAF11-204ENST00000395454 LYPD1Q8N2G4 141 aa11.68□□□□□ -0.54
SCAF11-204ENST00000395454 OR10G8Q8NGN5 311 aa11.68□□□□□ -0.54
SCAF11-204ENST00000395454 LINC01006Q8NI28 216 aa11.68□□□□□ -0.54
SCAF11-204ENST00000395454 BTF3L4Q96K17 158 aa11.68□□□□□ -0.54
SCAF11-204ENST00000395454 CCDC140Q96MF4 163 aa11.68□□□□□ -0.54
SCAF11-204ENST00000395454 ATG101Q9BSB4 218 aa11.68□□□□□ -0.54
SCAF11-204ENST00000395454 CHRDL1Q9BU40 450 aa11.68□□□□□ -0.54
SCAF11-204ENST00000395454 SRD5A3Q9H8P0 318 aa11.68□□□□□ -0.54
SCAF11-204ENST00000395454 SERTAD4Q9NUC0 356 aa11.68□□□□□ -0.54
SCAF11-204ENST00000395454 TRAV9-1A0A075B6T8 112 aa11.67□□□□□ -0.54
SCAF11-204ENST00000395454 FAM223BA6NKX1 122 aa11.67□□□□□ -0.54
SCAF11-204ENST00000395454 NDUFA7O95182 113 aa11.67□□□□□ -0.54
SCAF11-204ENST00000395454 PDE6HQ13956 83 aa11.67□□□□□ -0.54
SCAF11-204ENST00000395454 KCNIP4Q6PIL6 250 aa11.67□□□□□ -0.54
SCAF11-204ENST00000395454 FAM223AQ8IWN6 122 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 139 ms