RNA–Protein interactions for RNA: ENST00000368914.7

SEMA6C-204, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 3,892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-204ENST00000368914 J3QLI3 93 aa11.18□□□□□ -0.62
SEMA6C-204ENST00000368914 K7EIM0 57 aa11.18□□□□□ -0.62
SEMA6C-204ENST00000368914 CNN1P51911 297 aaKnown RBP11.18□□□□□ -0.62
SEMA6C-204ENST00000368914 SYNJ2BPP57105 145 aa11.18□□□□□ -0.62
SEMA6C-204ENST00000368914 KMT2BQ9UMN6 2715 aaPredicted RBP11.18□□□□□ -0.62
SEMA6C-204ENST00000368914 TRAV8-1A0A0A6YYK1 113 aa11.17□□□□□ -0.62
SEMA6C-204ENST00000368914 GNG4P50150 75 aa11.17□□□□□ -0.62
SEMA6C-204ENST00000368914 PARLQ9H300 379 aa11.17□□□□□ -0.62
SEMA6C-204ENST00000368914 NAGKQ9UJ70 344 aa11.17□□□□□ -0.62
SEMA6C-204ENST00000368914 CD33P20138 364 aa11.17□□□□□ -0.62
SEMA6C-204ENST00000368914 NPBQ8NG41 125 aa11.17□□□□□ -0.62
SEMA6C-204ENST00000368914 STAB1Q9NY15 2570 aa11.17□□□□□ -0.62
SEMA6C-204ENST00000368914 C16orf92Q96LL3 132 aa11.17□□□□□ -0.62
SEMA6C-204ENST00000368914 MGAM2Q2M2H8 2515 aa11.16□□□□□ -0.62
SEMA6C-204ENST00000368914 M0QZ24 198 aa11.16□□□□□ -0.62
SEMA6C-204ENST00000368914 GGCTO75223 188 aaKnown RBP11.16□□□□□ -0.62
SEMA6C-204ENST00000368914 OR5I1Q13606 314 aa11.16□□□□□ -0.62
SEMA6C-204ENST00000368914 KLHL30-AS1Q8NEE0 82 aa11.16□□□□□ -0.62
SEMA6C-204ENST00000368914 HIST1H2BAQ96A08 127 aa11.16□□□□□ -0.62
SEMA6C-204ENST00000368914 C17orf77Q96MU5 243 aa11.16□□□□□ -0.62
SEMA6C-204ENST00000368914 FANCD2OSQ96PS1 177 aa11.16□□□□□ -0.62
SEMA6C-204ENST00000368914 SLC25A39Q9BZJ4 359 aaPredicted RBP11.16□□□□□ -0.62
SEMA6C-204ENST00000368914 ELOA3CA0A087WX78 387 aaPredicted RBP11.16□□□□□ -0.62
SEMA6C-204ENST00000368914 IGLC1P0CG04 106 aa11.16□□□□□ -0.62
SEMA6C-204ENST00000368914 LY6G6DO95868 133 aa11.16□□□□□ -0.62
SEMA6C-204ENST00000368914 IGKV1-17P01599 117 aa11.16□□□□□ -0.62
SEMA6C-204ENST00000368914 FAM106AQ4KMX7 169 aa11.16□□□□□ -0.62
SEMA6C-204ENST00000368914 MUC21A0A0G2JKD1 596 aa11.15□□□□□ -0.62
SEMA6C-204ENST00000368914 MUC21A0A140T8X8 626 aa11.15□□□□□ -0.62
SEMA6C-204ENST00000368914 NDUFA3O95167 84 aa11.15□□□□□ -0.62
SEMA6C-204ENST00000368914 ZNF705DP0CH99 300 aaPredicted RBP11.15□□□□□ -0.62
SEMA6C-204ENST00000368914 ZNF705BP0CI00 300 aaPredicted RBP11.15□□□□□ -0.62
SEMA6C-204ENST00000368914 ATP5IP56385 69 aaPredicted RBP11.15□□□□□ -0.62
SEMA6C-204ENST00000368914 MUC21Q5SSG8 566 aa11.15□□□□□ -0.62
SEMA6C-204ENST00000368914 BAGE2Q86Y30 109 aa11.15□□□□□ -0.62
SEMA6C-204ENST00000368914 KLHDC1Q8N7A1 406 aa11.15□□□□□ -0.62
SEMA6C-204ENST00000368914 TRAV30A0A087WSZ9 112 aa11.15□□□□□ -0.62
SEMA6C-204ENST00000368914 A0A0G2JLM5 398 aa11.15□□□□□ -0.62
SEMA6C-204ENST00000368914 HIST1H1BP16401 226 aaKnown RBP11.15□□□□□ -0.62
SEMA6C-204ENST00000368914 IER3P46695 156 aa11.15□□□□□ -0.62
SEMA6C-204ENST00000368914 COMMD1Q8N668 190 aa11.15□□□□□ -0.62
SEMA6C-204ENST00000368914 C1orf159Q96HA4 380 aa11.15□□□□□ -0.62
SEMA6C-204ENST00000368914 LOC102723971A0A1B0GUV8 181 aa11.15□□□□□ -0.62
SEMA6C-204ENST00000368914 RAB9AP51151 201 aa11.15□□□□□ -0.62
SEMA6C-204ENST00000368914 BSXQ3C1V8 233 aa11.15□□□□□ -0.62
SEMA6C-204ENST00000368914 TM4SF20Q53R12 229 aa11.15□□□□□ -0.62
SEMA6C-204ENST00000368914 TEX38Q6PEX7 206 aa11.15□□□□□ -0.62
SEMA6C-204ENST00000368914 TOMM20LQ6UXN7 152 aa11.15□□□□□ -0.62
SEMA6C-204ENST00000368914 LURAP1LQ8IV03 231 aa11.15□□□□□ -0.62
SEMA6C-204ENST00000368914 OR4B1Q8NGF8 309 aa11.15□□□□□ -0.62
SEMA6C-204ENST00000368914 FAM110DQ8TAY7 271 aaPredicted RBP11.15□□□□□ -0.62
SEMA6C-204ENST00000368914 DYNLRB2Q8TF09 96 aa11.15□□□□□ -0.62
SEMA6C-204ENST00000368914 MANBALQ9NQG1 85 aa11.15□□□□□ -0.62
SEMA6C-204ENST00000368914 YTHDF2Q9Y5A9 579 aaKnown RBP11.15□□□□□ -0.62
SEMA6C-204ENST00000368914 CXorf65A6NEN9 183 aa11.14□□□□□ -0.63
SEMA6C-204ENST00000368914 ZNF48Q96MX3 618 aaPredicted RBP11.14□□□□□ -0.63
SEMA6C-204ENST00000368914 ZNF705FA8MVS1 300 aaPredicted RBP11.14□□□□□ -0.63
SEMA6C-204ENST00000368914 SRP19P09132 144 aaKnown RBP11.14□□□□□ -0.63
SEMA6C-204ENST00000368914 LRRC75A-AS1Q8N1F1 130 aa11.14□□□□□ -0.63
SEMA6C-204ENST00000368914 I3L2K1 104 aa11.13□□□□□ -0.63
SEMA6C-204ENST00000368914 STAG3L2P0CL84 134 aa11.13□□□□□ -0.63
SEMA6C-204ENST00000368914 STAG3L3P0CL85 134 aa11.13□□□□□ -0.63
SEMA6C-204ENST00000368914 FAM3BP58499 235 aaPredicted RBP11.13□□□□□ -0.63
SEMA6C-204ENST00000368914 ZNF343Q6P1L6 599 aa11.13□□□□□ -0.63
SEMA6C-204ENST00000368914 K7EQM0 130 aa11.13□□□□□ -0.63
SEMA6C-204ENST00000368914 DMRT1Q9Y5R6 373 aa11.13□□□□□ -0.63
SEMA6C-204ENST00000368914 CRYGBP07316 175 aa11.13□□□□□ -0.63
SEMA6C-204ENST00000368914 ADCYAP1P18509 176 aa11.13□□□□□ -0.63
SEMA6C-204ENST00000368914 GALR1P47211 349 aa11.13□□□□□ -0.63
SEMA6C-204ENST00000368914 A6NDX4 124 aa11.12□□□□□ -0.63
SEMA6C-204ENST00000368914 TGOLN2O43493 480 aa11.12□□□□□ -0.63
SEMA6C-204ENST00000368914 RELQ04864 619 aaPredicted RBP11.12□□□□□ -0.63
SEMA6C-204ENST00000368914 RNF182Q8N6D2 247 aa11.12□□□□□ -0.63
SEMA6C-204ENST00000368914 ZNF738Q8NE65 137 aa11.12□□□□□ -0.63
SEMA6C-204ENST00000368914 PIFOQ8TCI5 191 aa11.12□□□□□ -0.63
SEMA6C-204ENST00000368914 LSM4Q9Y4Z0 139 aaKnown RBP11.12□□□□□ -0.63
SEMA6C-204ENST00000368914 HLA-DMBP28068 263 aa11.12□□□□□ -0.63
SEMA6C-204ENST00000368914 DPPA3Q6W0C5 159 aa11.12□□□□□ -0.63
SEMA6C-204ENST00000368914 GRAMD2BQ96HH9 432 aa11.12□□□□□ -0.63
SEMA6C-204ENST00000368914 Q9H3A6 140 aa11.12□□□□□ -0.63
SEMA6C-204ENST00000368914 TCAPO15273 167 aa11.12□□□□□ -0.63
SEMA6C-204ENST00000368914 SCGB1D1O95968 90 aa11.12□□□□□ -0.63
SEMA6C-204ENST00000368914 CT45A10P0DMU9 189 aa11.12□□□□□ -0.63
SEMA6C-204ENST00000368914 PATE2Q6UY27 113 aa11.12□□□□□ -0.63
SEMA6C-204ENST00000368914 TMEM116Q8NCL8 245 aa11.12□□□□□ -0.63
SEMA6C-204ENST00000368914 RNF2Q99496 336 aa11.12□□□□□ -0.63
SEMA6C-204ENST00000368914 TRGV9Q99603 122 aa11.12□□□□□ -0.63
SEMA6C-204ENST00000368914 VPS13CQ709C8 3753 aa11.12□□□□□ -0.63
SEMA6C-204ENST00000368914 IGLV11-55A0A075B6I3 123 aa11.11□□□□□ -0.63
SEMA6C-204ENST00000368914 DNAJC9-AS1A6NH13 148 aa11.11□□□□□ -0.63
SEMA6C-204ENST00000368914 SLC17A3O00476 420 aa11.11□□□□□ -0.63
SEMA6C-204ENST00000368914 DEFB1P60022 68 aa11.11□□□□□ -0.63
SEMA6C-204ENST00000368914 CD81P60033 236 aa11.11□□□□□ -0.63
SEMA6C-204ENST00000368914 SCGB2A2Q13296 93 aa11.11□□□□□ -0.63
SEMA6C-204ENST00000368914 TTC9CQ8N5M4 171 aa11.11□□□□□ -0.63
SEMA6C-204ENST00000368914 RPL7P18124 248 aaKnown RBP11.11□□□□□ -0.63
SEMA6C-204ENST00000368914 CTSGP08311 255 aa11.11□□□□□ -0.63
SEMA6C-204ENST00000368914 MBD3L1Q8WWY6 194 aa11.11□□□□□ -0.63
SEMA6C-204ENST00000368914 GPR61Q9BZJ8 451 aa11.11□□□□□ -0.63
SEMA6C-204ENST00000368914 CARHSP1Q9Y2V2 147 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms