RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 OVOL2Q9BRP0 275 aa13.64□□□□□ -0.23
CHTOP-202ENST00000368687 ARV1Q9H2C2 271 aa13.64□□□□□ -0.23
CHTOP-202ENST00000368687 SLC25A32Q9H2D1 315 aa13.64□□□□□ -0.23
CHTOP-202ENST00000368687 RETNQ9HD89 108 aa13.64□□□□□ -0.23
CHTOP-202ENST00000368687 KCNIP2Q9NS61 270 aa13.64□□□□□ -0.23
CHTOP-202ENST00000368687 DOK5Q9P104 306 aa13.64□□□□□ -0.23
CHTOP-202ENST00000368687 COX7A2P2O60397 106 aa13.63□□□□□ -0.23
CHTOP-202ENST00000368687 MPC2O95563 127 aa13.63□□□□□ -0.23
CHTOP-202ENST00000368687 ATF4P18848 351 aaPredicted RBP13.63□□□□□ -0.23
CHTOP-202ENST00000368687 RPL29P47914 159 aaKnown RBP13.63□□□□□ -0.23
CHTOP-202ENST00000368687 NUTF2P61970 127 aaKnown RBP13.63□□□□□ -0.23
CHTOP-202ENST00000368687 DEFB135Q30KP9 77 aa13.63□□□□□ -0.23
CHTOP-202ENST00000368687 TRPT1Q86TN4 253 aaKnown RBP13.63□□□□□ -0.23
CHTOP-202ENST00000368687 OR1L4Q8NGR5 311 aa13.63□□□□□ -0.23
CHTOP-202ENST00000368687 MED28Q9H204 178 aa13.63□□□□□ -0.23
CHTOP-202ENST00000368687 OR5AC2Q9NZP5 309 aa13.63□□□□□ -0.23
CHTOP-202ENST00000368687 SOCS3O14543 225 aa13.62□□□□□ -0.23
CHTOP-202ENST00000368687 ACTL10Q5JWF8 245 aa13.62□□□□□ -0.23
CHTOP-202ENST00000368687 OR5C1Q8NGR4 320 aa13.62□□□□□ -0.23
CHTOP-202ENST00000368687 SCRT1Q9BWW7 348 aa13.62□□□□□ -0.23
CHTOP-202ENST00000368687 CA1P00915 261 aaPredicted RBP13.61□□□□□ -0.23
CHTOP-202ENST00000368687 FGF7P21781 194 aa13.61□□□□□ -0.23
CHTOP-202ENST00000368687 PRR20EP86478 221 aa13.61□□□□□ -0.23
CHTOP-202ENST00000368687 PRR20CP86479 221 aa13.61□□□□□ -0.23
CHTOP-202ENST00000368687 PRR20DP86480 221 aa13.61□□□□□ -0.23
CHTOP-202ENST00000368687 PRR20BP86481 221 aa13.61□□□□□ -0.23
CHTOP-202ENST00000368687 PRR20AP86496 221 aa13.61□□□□□ -0.23
CHTOP-202ENST00000368687 C10orf113Q5VZT2 155 aa13.61□□□□□ -0.23
CHTOP-202ENST00000368687 FOXI2Q6ZQN5 318 aa13.61□□□□□ -0.23
CHTOP-202ENST00000368687 LINC00305Q7Z4B0 112 aa13.61□□□□□ -0.23
CHTOP-202ENST00000368687 C16orf92Q96LL3 132 aa13.61□□□□□ -0.23
CHTOP-202ENST00000368687 RSG1Q9BU20 258 aa13.61□□□□□ -0.23
CHTOP-202ENST00000368687 C1QTNF4Q9BXJ3 329 aa13.61□□□□□ -0.23
CHTOP-202ENST00000368687 RPRMQ9NS64 109 aa13.61□□□□□ -0.23
CHTOP-202ENST00000368687 AGRNO00468 2067 aa13.6□□□□□ -0.23
CHTOP-202ENST00000368687 H0YIZ8 118 aa13.6□□□□□ -0.23
CHTOP-202ENST00000368687 HLA-DRB4P13762 266 aa13.6□□□□□ -0.23
CHTOP-202ENST00000368687 CXCL2P19875 107 aa13.6□□□□□ -0.23
CHTOP-202ENST00000368687 B2MP61769 119 aa13.6□□□□□ -0.23
CHTOP-202ENST00000368687 NHLH2Q02577 135 aa13.6□□□□□ -0.23
CHTOP-202ENST00000368687 FGL1Q08830 312 aa13.6□□□□□ -0.23
CHTOP-202ENST00000368687 OPCMLQ14982 345 aa13.6□□□□□ -0.23
CHTOP-202ENST00000368687 LINC00052Q96N35 136 aa13.6□□□□□ -0.23
CHTOP-202ENST00000368687 UHRF2Q96PU4 802 aa13.6□□□□□ -0.23
CHTOP-202ENST00000368687 DNAJC4Q9NNZ3 241 aa13.6□□□□□ -0.23
CHTOP-202ENST00000368687 HLA-DRB4X5D2U9 266 aa13.6□□□□□ -0.23
CHTOP-202ENST00000368687 A0A087X0K7 114 aa13.59□□□□□ -0.23
CHTOP-202ENST00000368687 KNCNA6PVL3 124 aa13.59□□□□□ -0.23
CHTOP-202ENST00000368687 LYL1P12980 280 aa13.59□□□□□ -0.23
CHTOP-202ENST00000368687 BPIFA4PQ86YQ2 179 aa13.59□□□□□ -0.23
CHTOP-202ENST00000368687 ZNF709Q8N972 641 aa13.59□□□□□ -0.23
CHTOP-202ENST00000368687 THAP6Q8TBB0 222 aa13.59□□□□□ -0.23
CHTOP-202ENST00000368687 CLUHP3Q96NS8 147 aa13.59□□□□□ -0.23
CHTOP-202ENST00000368687 RNF126Q9BV68 326 aa13.59□□□□□ -0.23
CHTOP-202ENST00000368687 NPCDR1Q9BY65 106 aa13.59□□□□□ -0.23
CHTOP-202ENST00000368687 SLC39A9Q9NUM3 307 aa13.59□□□□□ -0.23
CHTOP-202ENST00000368687 H3BMM0 161 aa13.58□□□□□ -0.24
CHTOP-202ENST00000368687 EBLN2Q6P2I7 272 aa13.58□□□□□ -0.24
CHTOP-202ENST00000368687 PATE2Q6UY27 113 aa13.58□□□□□ -0.24
CHTOP-202ENST00000368687 ATP5SQ99766 215 aa13.58□□□□□ -0.24
CHTOP-202ENST00000368687 SAV1Q9H4B6 383 aaPredicted RBP13.58□□□□□ -0.24
CHTOP-202ENST00000368687 MBD2Q9UBB5 411 aa13.58□□□□□ -0.24
CHTOP-202ENST00000368687 PXMP4Q9Y6I8 212 aa13.58□□□□□ -0.24
CHTOP-202ENST00000368687 DNAH7Q8WXX0 4024 aa13.58□□□□□ -0.24
CHTOP-202ENST00000368687 C17orf112F2Z3M2 114 aa13.57□□□□□ -0.24
CHTOP-202ENST00000368687 RPL12P30050 165 aaKnown RBP13.57□□□□□ -0.24
CHTOP-202ENST00000368687 CLINT1Q14677 625 aa13.57□□□□□ -0.24
CHTOP-202ENST00000368687 MIC13Q5XKP0 118 aa13.57□□□□□ -0.24
CHTOP-202ENST00000368687 LCN15Q6UWW0 184 aa13.57□□□□□ -0.24
CHTOP-202ENST00000368687 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.57□□□□□ -0.24
CHTOP-202ENST00000368687 TMEM37Q8WXS4 190 aa13.57□□□□□ -0.24
CHTOP-202ENST00000368687 HSPB11Q9Y547 144 aa13.57□□□□□ -0.24
CHTOP-202ENST00000368687 GIPP09681 153 aaPredicted RBP13.56□□□□□ -0.24
CHTOP-202ENST00000368687 CXCL3P19876 107 aa13.56□□□□□ -0.24
CHTOP-202ENST00000368687 OXA1LQ15070 435 aa13.56□□□□□ -0.24
CHTOP-202ENST00000368687 LRRC20Q8TCA0 184 aa13.56□□□□□ -0.24
CHTOP-202ENST00000368687 RARRES2Q99969 163 aa13.56□□□□□ -0.24
CHTOP-202ENST00000368687 CLEC5AQ9NY25 188 aa13.56□□□□□ -0.24
CHTOP-202ENST00000368687 IFNA5P01569 189 aa13.55□□□□□ -0.24
CHTOP-202ENST00000368687 FCN2Q15485 313 aa13.55□□□□□ -0.24
CHTOP-202ENST00000368687 GUK1Q16774 197 aa13.55□□□□□ -0.24
CHTOP-202ENST00000368687 OR11H7Q8NGC8 314 aa13.55□□□□□ -0.24
CHTOP-202ENST00000368687 SLC50A1Q9BRV3 221 aa13.55□□□□□ -0.24
CHTOP-202ENST00000368687 WDR61Q9GZS3 305 aaKnown RBP13.55□□□□□ -0.24
CHTOP-202ENST00000368687 OR11H2Q8NH07 326 aa13.54□□□□□ -0.24
CHTOP-202ENST00000368687 PARD6GQ9BYG4 376 aaPredicted RBP13.54□□□□□ -0.24
CHTOP-202ENST00000368687 HRH4Q9H3N8 390 aa13.54□□□□□ -0.24
CHTOP-202ENST00000368687 RYR3Q15413 4870 aa13.53□□□□□ -0.24
CHTOP-202ENST00000368687 DUSP14O95147 198 aaKnown RBP13.53□□□□□ -0.24
CHTOP-202ENST00000368687 CASC10Q5T4H9 136 aa13.53□□□□□ -0.24
CHTOP-202ENST00000368687 SCGB1C1Q8TD33 95 aa13.53□□□□□ -0.24
CHTOP-202ENST00000368687 C11orf68Q9H3H3 251 aaKnown RBP13.53□□□□□ -0.24
CHTOP-202ENST00000368687 A0A0J9YX75 114 aa13.52□□□□□ -0.25
CHTOP-202ENST00000368687 MRPS12O15235 138 aaKnown RBP13.52□□□□□ -0.25
CHTOP-202ENST00000368687 C4BPBP20851 252 aa13.52□□□□□ -0.25
CHTOP-202ENST00000368687 C17orf77Q96MU5 243 aa13.52□□□□□ -0.25
CHTOP-202ENST00000368687 A0A0J9YWU9 116 aa13.51□□□□□ -0.25
CHTOP-202ENST00000368687 ZNF253O75346 499 aa13.51□□□□□ -0.25
CHTOP-202ENST00000368687 GIG44P09565 113 aaPredicted RBP13.51□□□□□ -0.25
CHTOP-202ENST00000368687 ZNF266Q14584 549 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms