RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 MRPL20Q9BYC9 149 aaKnown RBP3.85□□□□□ -1.79
ECHDC1-204ENST00000368292 DPY30Q9C005 99 aa3.85□□□□□ -1.79
ECHDC1-204ENST00000368292 ZNF226Q9NYT6 803 aa3.85□□□□□ -1.79
ECHDC1-204ENST00000368292 CCDC167Q9P0B6 97 aa3.85□□□□□ -1.79
ECHDC1-204ENST00000368292 MTFP1Q9UDX5 166 aa3.85□□□□□ -1.79
ECHDC1-204ENST00000368292 FUT9Q9Y231 359 aa3.85□□□□□ -1.79
ECHDC1-204ENST00000368292 FREM1Q5H8C1 2179 aa3.85□□□□□ -1.79
ECHDC1-204ENST00000368292 DSCAMO60469 2012 aa3.84□□□□□ -1.79
ECHDC1-204ENST00000368292 TRAV17A0A0B4J275 112 aa3.84□□□□□ -1.79
ECHDC1-204ENST00000368292 IGHV3OR16-9A0A0B4J2B5 98 aa3.84□□□□□ -1.79
ECHDC1-204ENST00000368292 IGKV1D-13A0A0B4J2D9 117 aa3.84□□□□□ -1.79
ECHDC1-204ENST00000368292 B4DEV8 164 aa3.84□□□□□ -1.79
ECHDC1-204ENST00000368292 LY6LH3BQJ8 138 aa3.84□□□□□ -1.79
ECHDC1-204ENST00000368292 DEDDO75618 318 aa3.84□□□□□ -1.79
ECHDC1-204ENST00000368292 FCGR3AP08637 254 aa3.84□□□□□ -1.79
ECHDC1-204ENST00000368292 IGKV1-13P0DP09 117 aa3.84□□□□□ -1.79
ECHDC1-204ENST00000368292 FKBP2P26885 142 aaKnown RBP3.84□□□□□ -1.79
ECHDC1-204ENST00000368292 ZNF93P35789 620 aaPredicted RBP3.84□□□□□ -1.79
ECHDC1-204ENST00000368292 RPL34P49207 117 aaKnown RBP3.84□□□□□ -1.79
ECHDC1-204ENST00000368292 NUDT2P50583 147 aa3.84□□□□□ -1.79
ECHDC1-204ENST00000368292 TMBIM6P55061 237 aa3.84□□□□□ -1.79
ECHDC1-204ENST00000368292 DIO3P55073 304 aa3.84□□□□□ -1.79
ECHDC1-204ENST00000368292 NDUFV3P56181 108 aaKnown RBP3.84□□□□□ -1.79
ECHDC1-204ENST00000368292 RPS23P62266 143 aaKnown RBP3.84□□□□□ -1.79
ECHDC1-204ENST00000368292 HES1Q14469 280 aa3.84□□□□□ -1.79
ECHDC1-204ENST00000368292 ZNF146Q15072 292 aa3.84□□□□□ -1.79
ECHDC1-204ENST00000368292 RTL8BQ17RB0 113 aa3.84□□□□□ -1.79
ECHDC1-204ENST00000368292 KLF17Q5JT82 389 aaPredicted RBP3.84□□□□□ -1.79
ECHDC1-204ENST00000368292 LINC00242Q5T6M2 205 aa3.84□□□□□ -1.79
ECHDC1-204ENST00000368292 FAM219BQ5XKK7 198 aa3.84□□□□□ -1.79
ECHDC1-204ENST00000368292 KDM4DQ6B0I6 523 aa3.84□□□□□ -1.79
ECHDC1-204ENST00000368292 Q6Q795 121 aa3.84□□□□□ -1.79
ECHDC1-204ENST00000368292 ACP7Q6ZNF0 438 aa3.84□□□□□ -1.79
ECHDC1-204ENST00000368292 SMIM29Q86T20 159 aa3.84□□□□□ -1.79
ECHDC1-204ENST00000368292 TRPT1Q86TN4 253 aaKnown RBP3.84□□□□□ -1.79
ECHDC1-204ENST00000368292 HIST3H2BBQ8N257 126 aa3.84□□□□□ -1.79
ECHDC1-204ENST00000368292 OR8D4Q8NGM9 314 aa3.84□□□□□ -1.79
ECHDC1-204ENST00000368292 PSMF1Q92530 271 aa3.84□□□□□ -1.79
ECHDC1-204ENST00000368292 LINC01587Q99440 93 aa3.84□□□□□ -1.79
ECHDC1-204ENST00000368292 SDF2Q99470 211 aa3.84□□□□□ -1.79
ECHDC1-204ENST00000368292 PAXXQ9BUH6 204 aa3.84□□□□□ -1.79
ECHDC1-204ENST00000368292 WDR61Q9GZS3 305 aaKnown RBP3.84□□□□□ -1.79
ECHDC1-204ENST00000368292 EIF5A2Q9GZV4 153 aaKnown RBP3.84□□□□□ -1.79
ECHDC1-204ENST00000368292 ATG5Q9H1Y0 275 aa3.84□□□□□ -1.79
ECHDC1-204ENST00000368292 MDFICQ9P1T7 246 aa3.84□□□□□ -1.79
ECHDC1-204ENST00000368292 ZNF629Q9UEG4 869 aaPredicted RBP3.84□□□□□ -1.79
ECHDC1-204ENST00000368292 NUFIP1Q9UHK0 495 aaKnown RBP3.84□□□□□ -1.79
ECHDC1-204ENST00000368292 PCTPQ9UKL6 214 aa3.84□□□□□ -1.79
ECHDC1-204ENST00000368292 SIGLEC7Q9Y286 467 aa3.84□□□□□ -1.79
ECHDC1-204ENST00000368292 ZNF443Q9Y2A4 671 aaPredicted RBP3.84□□□□□ -1.79
ECHDC1-204ENST00000368292 FIS1Q9Y3D6 152 aa3.84□□□□□ -1.79
ECHDC1-204ENST00000368292 AMMECR1Q9Y4X0 333 aaPredicted RBP3.84□□□□□ -1.79
ECHDC1-204ENST00000368292 DNAJC13O75165 2243 aa3.84□□□□□ -1.79
ECHDC1-204ENST00000368292 CMYA5Q8N3K9 4069 aa3.83□□□□□ -1.8
ECHDC1-204ENST00000368292 TRAV8-1A0A0A6YYK1 113 aa3.83□□□□□ -1.8
ECHDC1-204ENST00000368292 IGHV1-69-2A0A0G2JMI3 117 aa3.83□□□□□ -1.8
ECHDC1-204ENST00000368292 LYZL6O75951 148 aa3.83□□□□□ -1.8
ECHDC1-204ENST00000368292 APOMO95445 188 aa3.83□□□□□ -1.8
ECHDC1-204ENST00000368292 IGLV3-25P01717 112 aa3.83□□□□□ -1.8
ECHDC1-204ENST00000368292 IGLC1P0CG04 106 aa3.83□□□□□ -1.8
ECHDC1-204ENST00000368292 MFAP2P55001 183 aa3.83□□□□□ -1.8
ECHDC1-204ENST00000368292 KHDC3LQ587J8 217 aa3.83□□□□□ -1.8
ECHDC1-204ENST00000368292 LCN12Q6JVE5 192 aa3.83□□□□□ -1.8
ECHDC1-204ENST00000368292 ZNF429Q86V71 674 aa3.83□□□□□ -1.8
ECHDC1-204ENST00000368292 RAB42Q8N4Z0 105 aa3.83□□□□□ -1.8
ECHDC1-204ENST00000368292 RFLNBQ8N5W9 214 aa3.83□□□□□ -1.8
ECHDC1-204ENST00000368292 ZFP62Q8NB50 900 aaPredicted RBP3.83□□□□□ -1.8
ECHDC1-204ENST00000368292 C15orf40Q8WUR7 153 aa3.83□□□□□ -1.8
ECHDC1-204ENST00000368292 SLC25A46Q96AG3 418 aa3.83□□□□□ -1.8
ECHDC1-204ENST00000368292 CIB3Q96Q77 187 aaPredicted RBP3.83□□□□□ -1.8
ECHDC1-204ENST00000368292 FKBP11Q9NYL4 201 aa3.83□□□□□ -1.8
ECHDC1-204ENST00000368292 ANAPC10Q9UM13 185 aa3.83□□□□□ -1.8
ECHDC1-204ENST00000368292 POMPQ9Y244 141 aa3.83□□□□□ -1.8
ECHDC1-204ENST00000368292 NOP16Q9Y3C1 178 aaKnown RBP3.83□□□□□ -1.8
ECHDC1-204ENST00000368292 V9GY05 133 aa3.83□□□□□ -1.8
ECHDC1-204ENST00000368292 HEATR5AQ86XA9 2040 aa3.82□□□□□ -1.8
ECHDC1-204ENST00000368292 A0A087WYN8 130 aa3.82□□□□□ -1.8
ECHDC1-204ENST00000368292 A0A087X0T9 212 aa3.82□□□□□ -1.8
ECHDC1-204ENST00000368292 TRAV8-3A0A0A6YYJ7 113 aa3.82□□□□□ -1.8
ECHDC1-204ENST00000368292 IGHV4-61A0A0C4DH41 118 aa3.82□□□□□ -1.8
ECHDC1-204ENST00000368292 C12orf77C9JDV5 145 aa3.82□□□□□ -1.8
ECHDC1-204ENST00000368292 ISLRO14498 428 aa3.82□□□□□ -1.8
ECHDC1-204ENST00000368292 KRASP01116 189 aa3.82□□□□□ -1.8
ECHDC1-204ENST00000368292 IGHV4-59P01825 116 aa3.82□□□□□ -1.8
ECHDC1-204ENST00000368292 CD1DP15813 335 aa3.82□□□□□ -1.8
ECHDC1-204ENST00000368292 PSMB8P28062 276 aa3.82□□□□□ -1.8
ECHDC1-204ENST00000368292 FCGR2CP31995 323 aa3.82□□□□□ -1.8
ECHDC1-204ENST00000368292 CRYBA2P53672 197 aa3.82□□□□□ -1.8
ECHDC1-204ENST00000368292 AQP4P55087 323 aa3.82□□□□□ -1.8
ECHDC1-204ENST00000368292 LMO4P61968 165 aa3.82□□□□□ -1.8
ECHDC1-204ENST00000368292 PLGLB1Q02325 96 aa3.82□□□□□ -1.8
ECHDC1-204ENST00000368292 KLRD1Q13241 179 aa3.82□□□□□ -1.8
ECHDC1-204ENST00000368292 ABCA11PQ4W5N1 156 aa3.82□□□□□ -1.8
ECHDC1-204ENST00000368292 C10orf91Q5T1B1 145 aa3.82□□□□□ -1.8
ECHDC1-204ENST00000368292 ALKAL2Q6UX46 152 aa3.82□□□□□ -1.8
ECHDC1-204ENST00000368292 SSX8Q7RTT4 187 aa3.82□□□□□ -1.8
ECHDC1-204ENST00000368292 NR2C2APQ86WQ0 139 aa3.82□□□□□ -1.8
ECHDC1-204ENST00000368292 PRR15Q8IV56 129 aa3.82□□□□□ -1.8
ECHDC1-204ENST00000368292 LINC00471Q8N535 108 aa3.82□□□□□ -1.8
ECHDC1-204ENST00000368292 STPG4Q8N801 248 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms