RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 KLRD1Q13241 179 aa13.89□□□□□ -0.19
TRAPPC11-201ENST00000334690 TMEM155Q4W5P6 130 aa13.89□□□□□ -0.19
TRAPPC11-201ENST00000334690 WDR86Q86TI4 376 aa13.89□□□□□ -0.19
TRAPPC11-201ENST00000334690 Q8TCH9 128 aa13.89□□□□□ -0.19
TRAPPC11-201ENST00000334690 A0A1B0GWB2 263 aa13.88□□□□□ -0.19
TRAPPC11-201ENST00000334690 H3BUT2 72 aa13.88□□□□□ -0.19
TRAPPC11-201ENST00000334690 IFI27P40305 119 aaPredicted RBP13.88□□□□□ -0.19
TRAPPC11-201ENST00000334690 C9orf139Q6ZV77 190 aa13.88□□□□□ -0.19
TRAPPC11-201ENST00000334690 LINC01587Q99440 93 aa13.88□□□□□ -0.19
TRAPPC11-201ENST00000334690 VCX2Q9H322 139 aa13.88□□□□□ -0.19
TRAPPC11-201ENST00000334690 A0A1W2PPI3 338 aa13.88□□□□□ -0.19
TRAPPC11-201ENST00000334690 APOMO95445 188 aa13.88□□□□□ -0.19
TRAPPC11-201ENST00000334690 ZNF138P52744 262 aa13.88□□□□□ -0.19
TRAPPC11-201ENST00000334690 ALKBH7Q9BT30 221 aaPredicted RBP13.88□□□□□ -0.19
TRAPPC11-201ENST00000334690 FRMPD3Q5JV73 1810 aa13.88□□□□□ -0.19
TRAPPC11-201ENST00000334690 LDLRAD2Q5SZI1 272 aa13.88□□□□□ -0.19
TRAPPC11-201ENST00000334690 KIR3DL3Q8N743 410 aa13.88□□□□□ -0.19
TRAPPC11-201ENST00000334690 C3orf79P0CE67 100 aa13.88□□□□□ -0.19
TRAPPC11-201ENST00000334690 VDAC2P45880 294 aaPredicted RBP13.88□□□□□ -0.19
TRAPPC11-201ENST00000334690 TRAV8-1A0A0A6YYK1 113 aa13.87□□□□□ -0.19
TRAPPC11-201ENST00000334690 LYZL1Q6UWQ5 148 aa13.87□□□□□ -0.19
TRAPPC11-201ENST00000334690 IGFL3Q6UXB1 125 aa13.87□□□□□ -0.19
TRAPPC11-201ENST00000334690 ZNF503-AS2A6NEH8 195 aa13.87□□□□□ -0.19
TRAPPC11-201ENST00000334690 DNAL4O96015 105 aa13.87□□□□□ -0.19
TRAPPC11-201ENST00000334690 LY6DQ14210 128 aa13.87□□□□□ -0.19
TRAPPC11-201ENST00000334690 ORAOV1Q8WV07 137 aa13.87□□□□□ -0.19
TRAPPC11-201ENST00000334690 IGKV3OR2-268A0A0C4DH90 116 aa13.87□□□□□ -0.19
TRAPPC11-201ENST00000334690 PDE6HQ13956 83 aa13.87□□□□□ -0.19
TRAPPC11-201ENST00000334690 PSG3Q16557 428 aa13.87□□□□□ -0.19
TRAPPC11-201ENST00000334690 OR9G4Q8NGQ1 327 aa13.87□□□□□ -0.19
TRAPPC11-201ENST00000334690 RNF138Q8WVD3 245 aa13.87□□□□□ -0.19
TRAPPC11-201ENST00000334690 JKAMPQ9P055 326 aa13.87□□□□□ -0.19
TRAPPC11-201ENST00000334690 LINC00527Q9UJ94 153 aa13.87□□□□□ -0.19
TRAPPC11-201ENST00000334690 D6R8Y8 96 aa13.86□□□□□ -0.19
TRAPPC11-201ENST00000334690 E7EQL1 145 aa13.86□□□□□ -0.19
TRAPPC11-201ENST00000334690 NHP2Q9NX24 153 aaKnown RBP13.86□□□□□ -0.19
TRAPPC11-201ENST00000334690 DSCR9P59020 149 aa13.86□□□□□ -0.19
TRAPPC11-201ENST00000334690 ZGRF1Q86YA3 2104 aa13.86□□□□□ -0.19
TRAPPC11-201ENST00000334690 ZFHX2Q9C0A1 2572 aaPredicted RBP13.86□□□□□ -0.19
TRAPPC11-201ENST00000334690 IGKCP01834 107 aa13.86□□□□□ -0.19
TRAPPC11-201ENST00000334690 RPRMLQ8N4K4 120 aa13.86□□□□□ -0.19
TRAPPC11-201ENST00000334690 TRBV7-1A0A0A6YYK4 115 aa13.86□□□□□ -0.19
TRAPPC11-201ENST00000334690 IGLV1-44P01699 117 aa13.86□□□□□ -0.19
TRAPPC11-201ENST00000334690 HSD52Q0P140 79 aa13.86□□□□□ -0.19
TRAPPC11-201ENST00000334690 MTURNQ8N3F0 131 aa13.86□□□□□ -0.19
TRAPPC11-201ENST00000334690 EVI2AP22794 236 aa13.85□□□□□ -0.19
TRAPPC11-201ENST00000334690 NDUFA4L2Q9NRX3 87 aa13.85□□□□□ -0.19
TRAPPC11-201ENST00000334690 ZNF329Q86UD4 541 aa13.85□□□□□ -0.19
TRAPPC11-201ENST00000334690 DTX1Q86Y01 620 aa13.85□□□□□ -0.19
TRAPPC11-201ENST00000334690 COL8A2P25067 703 aa13.85□□□□□ -0.19
TRAPPC11-201ENST00000334690 Q0VG73 95 aa13.85□□□□□ -0.19
TRAPPC11-201ENST00000334690 SHANK2-AS3Q9BTD1 123 aa13.85□□□□□ -0.19
TRAPPC11-201ENST00000334690 ZNF562Q6V9R5 426 aa13.84□□□□□ -0.19
TRAPPC11-201ENST00000334690 TRGV11A0A075B6L2 103 aa13.84□□□□□ -0.19
TRAPPC11-201ENST00000334690 TYMSP04818 313 aa13.84□□□□□ -0.19
TRAPPC11-201ENST00000334690 RNF166Q96A37 237 aaPredicted RBP13.84□□□□□ -0.19
TRAPPC11-201ENST00000334690 LINC00479Q96M42 142 aa13.84□□□□□ -0.19
TRAPPC11-201ENST00000334690 CEACAM8P31997 349 aaPredicted RBP13.84□□□□□ -0.19
TRAPPC11-201ENST00000334690 LCN12Q6JVE5 192 aa13.84□□□□□ -0.19
TRAPPC11-201ENST00000334690 SLC25A2Q9BXI2 301 aa13.84□□□□□ -0.19
TRAPPC11-201ENST00000334690 ACACBO00763 2458 aa13.84□□□□□ -0.19
TRAPPC11-201ENST00000334690 FAM231BA6NCW3 169 aa13.83□□□□□ -0.19
TRAPPC11-201ENST00000334690 SMAD7O15105 426 aaKnown RBP13.83□□□□□ -0.19
TRAPPC11-201ENST00000334690 TMEM219Q86XT9 240 aa13.83□□□□□ -0.19
TRAPPC11-201ENST00000334690 ZNF418Q8TF45 676 aaPredicted RBP13.83□□□□□ -0.19
TRAPPC11-201ENST00000334690 DENND4CQ5VZ89 1909 aa13.83□□□□□ -0.2
TRAPPC11-201ENST00000334690 ZNF726P1Q15940 193 aa13.83□□□□□ -0.2
TRAPPC11-201ENST00000334690 Q86TA4 180 aa13.83□□□□□ -0.2
TRAPPC11-201ENST00000334690 OR2K2Q8NGT1 345 aa13.83□□□□□ -0.2
TRAPPC11-201ENST00000334690 GFRA4Q9GZZ7 299 aa13.83□□□□□ -0.2
TRAPPC11-201ENST00000334690 LAGE3Q14657 143 aa13.83□□□□□ -0.2
TRAPPC11-201ENST00000334690 LINC00477Q96M19 166 aa13.83□□□□□ -0.2
TRAPPC11-201ENST00000334690 CRIM1Q9NZV1 1036 aa13.83□□□□□ -0.2
TRAPPC11-201ENST00000334690 FAM208BQ5VWN6 2430 aa13.83□□□□□ -0.2
TRAPPC11-201ENST00000334690 ARFGEF3Q5TH69 2177 aa13.83□□□□□ -0.2
TRAPPC11-201ENST00000334690 IGLV3-9A0A075B6K5 115 aa13.83□□□□□ -0.2
TRAPPC11-201ENST00000334690 C15orf65H3BRN8 121 aa13.83□□□□□ -0.2
TRAPPC11-201ENST00000334690 SH2D1AO60880 128 aa13.83□□□□□ -0.2
TRAPPC11-201ENST00000334690 NCR2O95944 276 aa13.83□□□□□ -0.2
TRAPPC11-201ENST00000334690 ZNF664Q8N3J9 261 aa13.83□□□□□ -0.2
TRAPPC11-201ENST00000334690 PLA2G2CQ5R387 149 aa13.82□□□□□ -0.2
TRAPPC11-201ENST00000334690 PLCE1Q9P212 2302 aa13.82□□□□□ -0.2
TRAPPC11-201ENST00000334690 B4DSR2 109 aa13.82□□□□□ -0.2
TRAPPC11-201ENST00000334690 ZNF833PQ6ZTB9 187 aa13.82□□□□□ -0.2
TRAPPC11-201ENST00000334690 CHTOPQ9Y3Y2 248 aaKnown RBP13.82□□□□□ -0.2
TRAPPC11-201ENST00000334690 SYS1-DBNDD2H3BUS1 97 aa13.82□□□□□ -0.2
TRAPPC11-201ENST00000334690 C17orf58Q2M2W7 97 aa13.82□□□□□ -0.2
TRAPPC11-201ENST00000334690 TTC32Q5I0X7 151 aa13.82□□□□□ -0.2
TRAPPC11-201ENST00000334690 MRPL52Q86TS9 123 aaKnown RBP13.82□□□□□ -0.2
TRAPPC11-201ENST00000334690 LINC00311Q8N616 119 aa13.82□□□□□ -0.2
TRAPPC11-201ENST00000334690 OR5A1Q8NGJ0 315 aa13.82□□□□□ -0.2
TRAPPC11-201ENST00000334690 Q8TAT8 98 aa13.82□□□□□ -0.2
TRAPPC11-201ENST00000334690 USMG5Q96IX5 58 aa13.82□□□□□ -0.2
TRAPPC11-201ENST00000334690 TRGV2A0A075B6R0 118 aa13.81□□□□□ -0.2
TRAPPC11-201ENST00000334690 TMEM262E9PQX1 116 aa13.81□□□□□ -0.2
TRAPPC11-201ENST00000334690 JMJD8Q96S16 334 aa13.81□□□□□ -0.2
TRAPPC11-201ENST00000334690 CT83Q5H943 113 aa13.81□□□□□ -0.2
TRAPPC11-201ENST00000334690 OR13C6PQ8NH95 151 aa13.81□□□□□ -0.2
TRAPPC11-201ENST00000334690 ZNRD1Q9P1U0 126 aa13.81□□□□□ -0.2
TRAPPC11-201ENST00000334690 ZNF492Q9P255 531 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms