RNA–Protein interactions for RNA: ENST00000331789.9

ACTB-201, Transcript of actin beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTB, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-201ENST00000331789 MGST1P10620 155 aaKnown RBP13.89□□□□□ -0.19
ACTB-201ENST00000331789 SNRPEP62304 92 aaKnown RBP13.89□□□□□ -0.19
ACTB-201ENST00000331789 KCNIP4Q6PIL6 250 aa13.89□□□□□ -0.19
ACTB-201ENST00000331789 OR4F17Q8NGA8 305 aa13.89□□□□□ -0.19
ACTB-201ENST00000331789 MBD6Q96DN6 1003 aa13.89□□□□□ -0.19
ACTB-201ENST00000331789 TCEAL7Q9BRU2 100 aa13.89□□□□□ -0.19
ACTB-201ENST00000331789 GNB4Q9HAV0 340 aa13.89□□□□□ -0.19
ACTB-201ENST00000331789 OTORQ9NRC9 128 aa13.89□□□□□ -0.19
ACTB-201ENST00000331789 TRBV19A0A075B6N1 114 aa13.88□□□□□ -0.19
ACTB-201ENST00000331789 ERVFC1-1P60608 527 aa13.88□□□□□ -0.19
ACTB-201ENST00000331789 TOMM20LQ6UXN7 152 aa13.88□□□□□ -0.19
ACTB-201ENST00000331789 C5orf17Q8NAS9 161 aa13.88□□□□□ -0.19
ACTB-201ENST00000331789 RNASE7Q9H1E1 156 aaKnown RBP13.88□□□□□ -0.19
ACTB-201ENST00000331789 TRBV7-1A0A0A6YYK4 115 aa13.88□□□□□ -0.19
ACTB-201ENST00000331789 TRGV3P03979 118 aa13.88□□□□□ -0.19
ACTB-201ENST00000331789 TMEM183BQ1AE95 376 aa13.88□□□□□ -0.19
ACTB-201ENST00000331789 BAGE2Q86Y30 109 aa13.88□□□□□ -0.19
ACTB-201ENST00000331789 IMMP2LQ96T52 175 aa13.88□□□□□ -0.19
ACTB-201ENST00000331789 RABAC1Q9UI14 185 aa13.88□□□□□ -0.19
ACTB-201ENST00000331789 APCP25054 2843 aa13.87□□□□□ -0.19
ACTB-201ENST00000331789 FSHBP01225 129 aa13.87□□□□□ -0.19
ACTB-201ENST00000331789 S100A7AQ86SG5 101 aa13.87□□□□□ -0.19
ACTB-201ENST00000331789 SRD5A3Q9H8P0 318 aa13.87□□□□□ -0.19
ACTB-201ENST00000331789 V9GYV3 84 aa13.87□□□□□ -0.19
ACTB-201ENST00000331789 TGOLN2O43493 480 aa13.86□□□□□ -0.19
ACTB-201ENST00000331789 TCRAP04437 139 aa13.86□□□□□ -0.19
ACTB-201ENST00000331789 S100A6P06703 90 aa13.86□□□□□ -0.19
ACTB-201ENST00000331789 PPIFP30405 207 aaKnown RBP13.86□□□□□ -0.19
ACTB-201ENST00000331789 IER3P46695 156 aa13.86□□□□□ -0.19
ACTB-201ENST00000331789 UBE2G1P62253 170 aa13.86□□□□□ -0.19
ACTB-201ENST00000331789 FOXL1Q12952 345 aa13.86□□□□□ -0.19
ACTB-201ENST00000331789 PRSS57Q6UWY2 283 aa13.86□□□□□ -0.19
ACTB-201ENST00000331789 ATG101Q9BSB4 218 aa13.86□□□□□ -0.19
ACTB-201ENST00000331789 ZFAND3Q9H8U3 227 aa13.86□□□□□ -0.19
ACTB-201ENST00000331789 GAR1Q9NY12 217 aaKnown RBP13.86□□□□□ -0.19
ACTB-201ENST00000331789 KLF12Q9Y4X4 402 aa13.86□□□□□ -0.19
ACTB-201ENST00000331789 PRRC2AP48634 2157 aaKnown RBP13.86□□□□□ -0.19
ACTB-201ENST00000331789 PPP5D1E7EU14 171 aa13.86□□□□□ -0.19
ACTB-201ENST00000331789 RPL15P61313 204 aaKnown RBP13.86□□□□□ -0.19
ACTB-201ENST00000331789 IL36BQ9NZH7 164 aa13.86□□□□□ -0.19
ACTB-201ENST00000331789 RNF24Q9Y225 148 aa13.86□□□□□ -0.19
ACTB-201ENST00000331789 C5orf52A6NGY3 159 aa13.85□□□□□ -0.19
ACTB-201ENST00000331789 FAM223BA6NKX1 122 aa13.85□□□□□ -0.19
ACTB-201ENST00000331789 BMPR1BO00238 502 aa13.85□□□□□ -0.19
ACTB-201ENST00000331789 PRB4P10163 310 aaPredicted RBP13.85□□□□□ -0.19
ACTB-201ENST00000331789 TPPP2P59282 170 aa13.85□□□□□ -0.19
ACTB-201ENST00000331789 SMUG1Q53HV7 270 aa13.85□□□□□ -0.19
ACTB-201ENST00000331789 FAM223AQ8IWN6 122 aa13.85□□□□□ -0.19
ACTB-201ENST00000331789 FRZBQ92765 325 aa13.85□□□□□ -0.19
ACTB-201ENST00000331789 OSTCQ9NRP0 149 aa13.85□□□□□ -0.19
ACTB-201ENST00000331789 ZANQ9Y493 2812 aa13.85□□□□□ -0.19
ACTB-201ENST00000331789 PHOX2AO14813 284 aa13.84□□□□□ -0.19
ACTB-201ENST00000331789 CYB5R2Q6BCY4 276 aa13.84□□□□□ -0.19
ACTB-201ENST00000331789 SIGLEC15Q6ZMC9 328 aa13.84□□□□□ -0.19
ACTB-201ENST00000331789 CMTM2Q8TAZ6 248 aa13.84□□□□□ -0.19
ACTB-201ENST00000331789 ZNF320A2RRD8 509 aa13.84□□□□□ -0.19
ACTB-201ENST00000331789 AP4M1O00189 453 aa13.84□□□□□ -0.19
ACTB-201ENST00000331789 KLK15Q9H2R5 256 aa13.84□□□□□ -0.19
ACTB-201ENST00000331789 HIST1H2BKO60814 126 aa13.83□□□□□ -0.2
ACTB-201ENST00000331789 TYMSP04818 313 aa13.83□□□□□ -0.2
ACTB-201ENST00000331789 HIST1H2BJP06899 126 aa13.83□□□□□ -0.2
ACTB-201ENST00000331789 TRGC1P0CF51 173 aa13.83□□□□□ -0.2
ACTB-201ENST00000331789 HIST1H2BOP23527 126 aa13.83□□□□□ -0.2
ACTB-201ENST00000331789 HIST1H2BBP33778 126 aa13.83□□□□□ -0.2
ACTB-201ENST00000331789 HIST1H2BDP58876 126 aa13.83□□□□□ -0.2
ACTB-201ENST00000331789 HIST1H2BCP62807 126 aa13.83□□□□□ -0.2
ACTB-201ENST00000331789 HIST2H2BEQ16778 126 aa13.83□□□□□ -0.2
ACTB-201ENST00000331789 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.83□□□□□ -0.2
ACTB-201ENST00000331789 IBA57Q5T440 356 aaKnown RBP13.83□□□□□ -0.2
ACTB-201ENST00000331789 GOLT1AQ6ZVE7 132 aa13.83□□□□□ -0.2
ACTB-201ENST00000331789 OR8I2Q8N0Y5 310 aa13.83□□□□□ -0.2
ACTB-201ENST00000331789 WFDC11Q8NEX6 87 aa13.83□□□□□ -0.2
ACTB-201ENST00000331789 HIST1H2BHQ93079 126 aa13.83□□□□□ -0.2
ACTB-201ENST00000331789 FMC1Q96HJ9 113 aa13.83□□□□□ -0.2
ACTB-201ENST00000331789 HIST1H2BNQ99877 126 aa13.83□□□□□ -0.2
ACTB-201ENST00000331789 HIST1H2BMQ99879 126 aa13.83□□□□□ -0.2
ACTB-201ENST00000331789 SMAD5-AS1Q9Y6J3 95 aa13.83□□□□□ -0.2
ACTB-201ENST00000331789 NBPF19A0A087WUL8 3843 aa13.83□□□□□ -0.2
ACTB-201ENST00000331789 CLPSL1A2RUU4 121 aa13.82□□□□□ -0.2
ACTB-201ENST00000331789 RPEL1Q2QD12 228 aa13.82□□□□□ -0.2
ACTB-201ENST00000331789 TMEM95Q3KNT9 176 aa13.82□□□□□ -0.2
ACTB-201ENST00000331789 CIARTQ8N365 385 aaPredicted RBP13.82□□□□□ -0.2
ACTB-201ENST00000331789 TRAV8-1A0A0A6YYK1 113 aa13.82□□□□□ -0.2
ACTB-201ENST00000331789 S100A9P06702 114 aaKnown RBP13.82□□□□□ -0.2
ACTB-201ENST00000331789 PF4V1P10720 104 aa13.82□□□□□ -0.2
ACTB-201ENST00000331789 RPL7P18124 248 aaKnown RBP13.82□□□□□ -0.2
ACTB-201ENST00000331789 NDUFA6P56556 154 aa13.82□□□□□ -0.2
ACTB-201ENST00000331789 LCNL1Q6ZST4 164 aa13.82□□□□□ -0.2
ACTB-201ENST00000331789 C9orf139Q6ZV77 190 aa13.82□□□□□ -0.2
ACTB-201ENST00000331789 LYPD1Q8N2G4 141 aa13.82□□□□□ -0.2
ACTB-201ENST00000331789 GPR82Q96P67 336 aa13.82□□□□□ -0.2
ACTB-201ENST00000331789 SERTAD4Q9NUC0 356 aa13.82□□□□□ -0.2
ACTB-201ENST00000331789 H3BUA1 57 aa13.81□□□□□ -0.2
ACTB-201ENST00000331789 ZNF207O43670 478 aaKnown RBP13.81□□□□□ -0.2
ACTB-201ENST00000331789 TRBV12-3P01733 135 aa13.81□□□□□ -0.2
ACTB-201ENST00000331789 FABP9Q0Z7S8 132 aa13.81□□□□□ -0.2
ACTB-201ENST00000331789 Q6YL49 198 aa13.81□□□□□ -0.2
ACTB-201ENST00000331789 BRI3O95415 125 aa13.8□□□□□ -0.2
ACTB-201ENST00000331789 LTAP01374 205 aa13.8□□□□□ -0.2
ACTB-201ENST00000331789 IGLV2-11P01706 119 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms