RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 FMC1Q96HJ9 113 aa13.8□□□□□ -0.2
COL9A1-201ENST00000320755 BCL6BQ8N143 479 aaPredicted RBP13.8□□□□□ -0.2
COL9A1-201ENST00000320755 RBM14Q96PK6 669 aaKnown RBP13.8□□□□□ -0.2
COL9A1-201ENST00000320755 TIMM8BQ9Y5J9 83 aaPredicted RBP13.8□□□□□ -0.2
COL9A1-201ENST00000320755 LTAP01374 205 aa13.79□□□□□ -0.2
COL9A1-201ENST00000320755 PVRIGQ6DKI7 326 aa13.79□□□□□ -0.2
COL9A1-201ENST00000320755 IL4P05112 153 aa13.79□□□□□ -0.2
COL9A1-201ENST00000320755 HBBP68871 147 aa13.79□□□□□ -0.2
COL9A1-201ENST00000320755 OR4B1Q8NGF8 309 aa13.79□□□□□ -0.2
COL9A1-201ENST00000320755 IGHV3-23P01764 117 aa13.79□□□□□ -0.2
COL9A1-201ENST00000320755 FCGR2BP31994 310 aaPredicted RBP13.79□□□□□ -0.2
COL9A1-201ENST00000320755 TPPP3Q9BW30 176 aa13.79□□□□□ -0.2
COL9A1-201ENST00000320755 CLEC5AQ9NY25 188 aa13.79□□□□□ -0.2
COL9A1-201ENST00000320755 DPM3Q9P2X0 92 aa13.79□□□□□ -0.2
COL9A1-201ENST00000320755 NCBP2LA6PVI3 153 aaKnown RBP13.78□□□□□ -0.2
COL9A1-201ENST00000320755 K7EIM0 57 aa13.78□□□□□ -0.2
COL9A1-201ENST00000320755 ZNF25P17030 456 aaPredicted RBP13.78□□□□□ -0.2
COL9A1-201ENST00000320755 LY6LH3BQJ8 138 aa13.78□□□□□ -0.2
COL9A1-201ENST00000320755 RASL11AQ6T310 242 aa13.78□□□□□ -0.2
COL9A1-201ENST00000320755 TXN2Q99757 166 aa13.78□□□□□ -0.2
COL9A1-201ENST00000320755 PLP1P60201 277 aa13.77□□□□□ -0.2
COL9A1-201ENST00000320755 OTORQ9NRC9 128 aa13.77□□□□□ -0.2
COL9A1-201ENST00000320755 M0R3E3 92 aa13.77□□□□□ -0.21
COL9A1-201ENST00000320755 NBR2O15453 112 aa13.77□□□□□ -0.21
COL9A1-201ENST00000320755 TFPI2P48307 235 aa13.77□□□□□ -0.21
COL9A1-201ENST00000320755 Q86TA4 180 aa13.77□□□□□ -0.21
COL9A1-201ENST00000320755 PRSS22Q9GZN4 317 aa13.77□□□□□ -0.21
COL9A1-201ENST00000320755 ZNF138P52744 262 aa13.77□□□□□ -0.21
COL9A1-201ENST00000320755 EBLN2Q6P2I7 272 aa13.77□□□□□ -0.21
COL9A1-201ENST00000320755 RAB1BQ9H0U4 201 aa13.77□□□□□ -0.21
COL9A1-201ENST00000320755 MRPL27Q9P0M9 148 aaKnown RBP13.77□□□□□ -0.21
COL9A1-201ENST00000320755 MAP1AP78559 2803 aaPredicted RBP13.77□□□□□ -0.21
COL9A1-201ENST00000320755 IGHV3OR16-8A0A075B7F1 116 aa13.76□□□□□ -0.21
COL9A1-201ENST00000320755 A0A1B0GXF2 115 aa13.76□□□□□ -0.21
COL9A1-201ENST00000320755 CHEK1O14757 476 aa13.76□□□□□ -0.21
COL9A1-201ENST00000320755 C19orf71A6NCJ1 209 aa13.76□□□□□ -0.21
COL9A1-201ENST00000320755 FAM181BA6NEQ2 426 aa13.76□□□□□ -0.21
COL9A1-201ENST00000320755 Q6ZN92 141 aa13.76□□□□□ -0.21
COL9A1-201ENST00000320755 BPIFA4PQ86YQ2 179 aa13.76□□□□□ -0.21
COL9A1-201ENST00000320755 OR4F17Q8NGA8 305 aa13.76□□□□□ -0.21
COL9A1-201ENST00000320755 TIMD4Q96H15 378 aa13.76□□□□□ -0.21
COL9A1-201ENST00000320755 HIVEP3Q5T1R4 2406 aa13.76□□□□□ -0.21
COL9A1-201ENST00000320755 IGHV3-35A0A0C4DH35 117 aa13.75□□□□□ -0.21
COL9A1-201ENST00000320755 GNG7O60262 68 aa13.75□□□□□ -0.21
COL9A1-201ENST00000320755 CSN3P07498 182 aa13.75□□□□□ -0.21
COL9A1-201ENST00000320755 RAXQ9Y2V3 346 aa13.75□□□□□ -0.21
COL9A1-201ENST00000320755 RBPMS2Q6ZRY4 209 aaKnown RBP13.75□□□□□ -0.21
COL9A1-201ENST00000320755 RNF125Q96EQ8 232 aa13.75□□□□□ -0.21
COL9A1-201ENST00000320755 LOC105371242A0A075B767 164 aa13.75□□□□□ -0.21
COL9A1-201ENST00000320755 IGLV2-11P01706 119 aa13.75□□□□□ -0.21
COL9A1-201ENST00000320755 RPLP1P05386 114 aaKnown RBP13.75□□□□□ -0.21
COL9A1-201ENST00000320755 ATP5L2Q7Z4Y8 100 aa13.75□□□□□ -0.21
COL9A1-201ENST00000320755 ZNF491Q8N8L2 437 aa13.74□□□□□ -0.21
COL9A1-201ENST00000320755 H0Y8G0 127 aa13.74□□□□□ -0.21
COL9A1-201ENST00000320755 OR2J3O76001 311 aa13.74□□□□□ -0.21
COL9A1-201ENST00000320755 ZC2HC1AQ96GY0 325 aa13.74□□□□□ -0.21
COL9A1-201ENST00000320755 URB1-AS1Q96HZ7 61 aa13.74□□□□□ -0.21
COL9A1-201ENST00000320755 SHANK2-AS3Q9BTD1 123 aa13.74□□□□□ -0.21
COL9A1-201ENST00000320755 TRBV19A0A075B6N1 114 aa13.73□□□□□ -0.21
COL9A1-201ENST00000320755 CTRLP40313 264 aa13.73□□□□□ -0.21
COL9A1-201ENST00000320755 TMSB15BA0A087X1C1 80 aa13.73□□□□□ -0.21
COL9A1-201ENST00000320755 HLA-DRB1P01911 266 aa13.73□□□□□ -0.21
COL9A1-201ENST00000320755 KLF5Q13887 457 aaPredicted RBP13.73□□□□□ -0.21
COL9A1-201ENST00000320755 CYB5R2Q6BCY4 276 aa13.73□□□□□ -0.21
COL9A1-201ENST00000320755 LINC00173Q6ZV60 143 aa13.73□□□□□ -0.21
COL9A1-201ENST00000320755 M0QZK8 103 aa13.72□□□□□ -0.21
COL9A1-201ENST00000320755 IGLC2P0DOY2 106 aa13.72□□□□□ -0.21
COL9A1-201ENST00000320755 IGLC3P0DOY3 106 aa13.72□□□□□ -0.21
COL9A1-201ENST00000320755 SMIM12Q96EX1 92 aa13.72□□□□□ -0.21
COL9A1-201ENST00000320755 ZNF492Q9P255 531 aa13.72□□□□□ -0.21
COL9A1-201ENST00000320755 NDUFS7O75251 213 aa13.72□□□□□ -0.21
COL9A1-201ENST00000320755 CEACAM3P40198 252 aa13.72□□□□□ -0.21
COL9A1-201ENST00000320755 ADORA2A-AS1P86434 159 aa13.72□□□□□ -0.21
COL9A1-201ENST00000320755 DYNAPQ8N1N2 210 aa13.72□□□□□ -0.21
COL9A1-201ENST00000320755 LY6G5BQ8NDX9 201 aa13.72□□□□□ -0.21
COL9A1-201ENST00000320755 CFHR4Q92496 578 aa13.72□□□□□ -0.21
COL9A1-201ENST00000320755 RNF5Q99942 180 aa13.72□□□□□ -0.21
COL9A1-201ENST00000320755 MCRIP2Q9BUT9 160 aaKnown RBP13.72□□□□□ -0.21
COL9A1-201ENST00000320755 TMEM14CQ9P0S9 112 aa13.72□□□□□ -0.21
COL9A1-201ENST00000320755 BTF3P20290 206 aaKnown RBP13.72□□□□□ -0.21
COL9A1-201ENST00000320755 C5orf64Q2M2E5 130 aa13.72□□□□□ -0.21
COL9A1-201ENST00000320755 UQCR10Q9UDW1 63 aa13.72□□□□□ -0.21
COL9A1-201ENST00000320755 MUC21A0A0G2JKD1 596 aa13.71□□□□□ -0.21
COL9A1-201ENST00000320755 MUC21A0A140T8X8 626 aa13.71□□□□□ -0.21
COL9A1-201ENST00000320755 HNRNPA3P51991 378 aaKnown RBP13.71□□□□□ -0.21
COL9A1-201ENST00000320755 MUC21Q5SSG8 566 aa13.71□□□□□ -0.21
COL9A1-201ENST00000320755 SPATA12Q7Z6I5 190 aa13.71□□□□□ -0.21
COL9A1-201ENST00000320755 PSG8Q9UQ74 426 aa13.71□□□□□ -0.21
COL9A1-201ENST00000320755 ZNF785A8K8V0 405 aa13.71□□□□□ -0.22
COL9A1-201ENST00000320755 NDPQ00604 133 aa13.71□□□□□ -0.22
COL9A1-201ENST00000320755 ARMS2P0C7Q2 107 aa13.7□□□□□ -0.22
COL9A1-201ENST00000320755 IGFL4Q6B9Z1 124 aa13.7□□□□□ -0.22
COL9A1-201ENST00000320755 SIGLEC15Q6ZMC9 328 aa13.7□□□□□ -0.22
COL9A1-201ENST00000320755 OR11H6Q8NGC7 330 aa13.7□□□□□ -0.22
COL9A1-201ENST00000320755 OR2T8A6NH00 312 aa13.7□□□□□ -0.22
COL9A1-201ENST00000320755 H3BRN7 92 aa13.7□□□□□ -0.22
COL9A1-201ENST00000320755 C8orf49Q96NF6 230 aa13.7□□□□□ -0.22
COL9A1-201ENST00000320755 COL12A1Q99715 3063 aa13.7□□□□□ -0.22
COL9A1-201ENST00000320755 C2orf70A6NJV1 201 aa13.7□□□□□ -0.22
COL9A1-201ENST00000320755 CT83Q5H943 113 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms