RNA–Protein interactions for RNA: ENST00000311550.9

GABRB3-202, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB3, Length 5,781 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-202ENST00000311550 ITGB1BP1O14713 200 aa13.95□□□□□ -0.18
GABRB3-202ENST00000311550 EREGO14944 169 aa13.95□□□□□ -0.18
GABRB3-202ENST00000311550 RASL11AQ6T310 242 aa13.95□□□□□ -0.18
GABRB3-202ENST00000311550 BEND2Q8NDZ0 799 aa13.95□□□□□ -0.18
GABRB3-202ENST00000311550 FNDC10F2Z333 226 aa13.94□□□□□ -0.18
GABRB3-202ENST00000311550 APOMO95445 188 aa13.94□□□□□ -0.18
GABRB3-202ENST00000311550 CD7P09564 240 aa13.94□□□□□ -0.18
GABRB3-202ENST00000311550 ASPHD1Q5U4P2 390 aa13.94□□□□□ -0.18
GABRB3-202ENST00000311550 CREBBPQ92793 2442 aa13.94□□□□□ -0.18
GABRB3-202ENST00000311550 SFTA2Q6UW10 78 aa13.94□□□□□ -0.18
GABRB3-202ENST00000311550 NHP2Q9NX24 153 aaKnown RBP13.94□□□□□ -0.18
GABRB3-202ENST00000311550 LYPD6BQ8NI32 183 aa13.94□□□□□ -0.18
GABRB3-202ENST00000311550 GTF3C1Q12789 2109 aa13.94□□□□□ -0.18
GABRB3-202ENST00000311550 PAX8Q06710 450 aa13.94□□□□□ -0.18
GABRB3-202ENST00000311550 ZNF124Q15973 351 aa13.94□□□□□ -0.18
GABRB3-202ENST00000311550 ST20Q9HBF5 79 aa13.94□□□□□ -0.18
GABRB3-202ENST00000311550 POLR3KQ9Y2Y1 108 aaPredicted RBP13.94□□□□□ -0.18
GABRB3-202ENST00000311550 ZNF418Q8TF45 676 aaPredicted RBP13.93□□□□□ -0.18
GABRB3-202ENST00000311550 NXT2Q9NPJ8 142 aaKnown RBP13.93□□□□□ -0.18
GABRB3-202ENST00000311550 TYMSP04818 313 aa13.93□□□□□ -0.18
GABRB3-202ENST00000311550 NDPQ00604 133 aa13.93□□□□□ -0.18
GABRB3-202ENST00000311550 GGTLC3B5MD39 225 aa13.93□□□□□ -0.18
GABRB3-202ENST00000311550 NDUFA4L2Q9NRX3 87 aa13.93□□□□□ -0.18
GABRB3-202ENST00000311550 PPP1R17O96001 155 aa13.93□□□□□ -0.18
GABRB3-202ENST00000311550 Q8NFD4 153 aa13.93□□□□□ -0.18
GABRB3-202ENST00000311550 DEFB104AQ8WTQ1 72 aa13.93□□□□□ -0.18
GABRB3-202ENST00000311550 NAA38Q9BRA0 125 aaKnown RBP13.93□□□□□ -0.18
GABRB3-202ENST00000311550 SH2D1AO60880 128 aa13.92□□□□□ -0.18
GABRB3-202ENST00000311550 PPBPP02775 128 aa13.92□□□□□ -0.18
GABRB3-202ENST00000311550 TNFRSF18Q9Y5U5 241 aa13.92□□□□□ -0.18
GABRB3-202ENST00000311550 A8MWP6 167 aa13.92□□□□□ -0.18
GABRB3-202ENST00000311550 TOMM40O96008 361 aa13.92□□□□□ -0.18
GABRB3-202ENST00000311550 PSG3Q16557 428 aa13.92□□□□□ -0.18
GABRB3-202ENST00000311550 NPFFO15130 113 aa13.92□□□□□ -0.18
GABRB3-202ENST00000311550 SIGLEC15Q6ZMC9 328 aa13.92□□□□□ -0.18
GABRB3-202ENST00000311550 ITLN2Q8WWU7 325 aaPredicted RBP13.92□□□□□ -0.18
GABRB3-202ENST00000311550 JMJD8Q96S16 334 aa13.92□□□□□ -0.18
GABRB3-202ENST00000311550 RNF5Q99942 180 aa13.92□□□□□ -0.18
GABRB3-202ENST00000311550 TRAV21A0A0B4J279 112 aa13.91□□□□□ -0.18
GABRB3-202ENST00000311550 SMAD7O15105 426 aaKnown RBP13.91□□□□□ -0.18
GABRB3-202ENST00000311550 DPM2O94777 84 aa13.91□□□□□ -0.18
GABRB3-202ENST00000311550 Q86TA4 180 aa13.91□□□□□ -0.18
GABRB3-202ENST00000311550 TRAV41A0A0B4J266 112 aa13.91□□□□□ -0.18
GABRB3-202ENST00000311550 DUX3Q96PT4 197 aa13.91□□□□□ -0.18
GABRB3-202ENST00000311550 SRSF1Q07955 248 aaKnown RBP eCLIP13.91□□□□□ -0.18
GABRB3-202ENST00000311550 MEIG1Q5JSS6 88 aa13.91□□□□□ -0.18
GABRB3-202ENST00000311550 PAPPA-AS1Q5QFB9 102 aa13.91□□□□□ -0.18
GABRB3-202ENST00000311550 C2orf88Q9BSF0 95 aa13.91□□□□□ -0.18
GABRB3-202ENST00000311550 SMKR1H3BMG3 65 aa13.91□□□□□ -0.18
GABRB3-202ENST00000311550 IGHV2-70P01814 119 aa13.91□□□□□ -0.18
GABRB3-202ENST00000311550 GATA4P43694 442 aa13.91□□□□□ -0.18
GABRB3-202ENST00000311550 DTX1Q86Y01 620 aa13.91□□□□□ -0.18
GABRB3-202ENST00000311550 TPSG1Q9NRR2 321 aa13.91□□□□□ -0.18
GABRB3-202ENST00000311550 MRPL27Q9P0M9 148 aaKnown RBP13.91□□□□□ -0.18
GABRB3-202ENST00000311550 NOTCH3Q9UM47 2321 aa13.91□□□□□ -0.18
GABRB3-202ENST00000311550 PAX1P15863 534 aa13.9□□□□□ -0.18
GABRB3-202ENST00000311550 DIAPH2-AS1Q14236 149 aa13.9□□□□□ -0.18
GABRB3-202ENST00000311550 BRD3OSQ6XYD6 125 aa13.9□□□□□ -0.18
GABRB3-202ENST00000311550 A0A1B0GWB2 263 aa13.9□□□□□ -0.18
GABRB3-202ENST00000311550 IGLV1-44P01699 117 aa13.9□□□□□ -0.18
GABRB3-202ENST00000311550 SLC25A2Q9BXI2 301 aa13.9□□□□□ -0.18
GABRB3-202ENST00000311550 C5orf30Q96GV9 206 aa13.9□□□□□ -0.18
GABRB3-202ENST00000311550 C2orf16Q68DN1 1984 aa13.9□□□□□ -0.18
GABRB3-202ENST00000311550 F2Z2F3 143 aa13.9□□□□□ -0.18
GABRB3-202ENST00000311550 SYS1-DBNDD2H3BUS1 97 aa13.9□□□□□ -0.18
GABRB3-202ENST00000311550 TMEM155Q4W5P6 130 aa13.9□□□□□ -0.18
GABRB3-202ENST00000311550 AMN1Q8IY45 258 aa13.9□□□□□ -0.18
GABRB3-202ENST00000311550 ORAOV1Q8WV07 137 aa13.9□□□□□ -0.18
GABRB3-202ENST00000311550 SUMO2P61956 95 aaKnown RBP13.89□□□□□ -0.19
GABRB3-202ENST00000311550 WT1-ASQ06250 92 aa13.89□□□□□ -0.19
GABRB3-202ENST00000311550 SMAGPQ0VAQ4 97 aa13.89□□□□□ -0.19
GABRB3-202ENST00000311550 MPV17L2Q567V2 206 aa13.89□□□□□ -0.19
GABRB3-202ENST00000311550 ZNF106Q9H2Y7 1883 aaKnown RBP13.89□□□□□ -0.19
GABRB3-202ENST00000311550 PCNX2A6NKB5 2137 aa13.89□□□□□ -0.19
GABRB3-202ENST00000311550 A0A087X0K7 114 aa13.89□□□□□ -0.19
GABRB3-202ENST00000311550 DLEU1O43261 78 aa13.89□□□□□ -0.19
GABRB3-202ENST00000311550 SRRM4A7MD48 611 aaKnown RBP13.89□□□□□ -0.19
GABRB3-202ENST00000311550 IGKCP01834 107 aa13.89□□□□□ -0.19
GABRB3-202ENST00000311550 ARMS2P0C7Q2 107 aa13.89□□□□□ -0.19
GABRB3-202ENST00000311550 Q0VG73 95 aa13.89□□□□□ -0.19
GABRB3-202ENST00000311550 ZNF833PQ6ZTB9 187 aa13.89□□□□□ -0.19
GABRB3-202ENST00000311550 C11orf53Q8IXP5 236 aa13.88□□□□□ -0.19
GABRB3-202ENST00000311550 OR4X2Q8NGF9 303 aa13.88□□□□□ -0.19
GABRB3-202ENST00000311550 H7C1H1 209 aa13.88□□□□□ -0.19
GABRB3-202ENST00000311550 LDLRAD2Q5SZI1 272 aa13.88□□□□□ -0.19
GABRB3-202ENST00000311550 C18orf32Q8TCD1 76 aa13.88□□□□□ -0.19
GABRB3-202ENST00000311550 NPFFR1Q9GZQ6 430 aa13.88□□□□□ -0.19
GABRB3-202ENST00000311550 V9GYV3 84 aa13.88□□□□□ -0.19
GABRB3-202ENST00000311550 ZFHX2Q9C0A1 2572 aaPredicted RBP13.88□□□□□ -0.19
GABRB3-202ENST00000311550 GTSCR1Q86UQ5 136 aa13.88□□□□□ -0.19
GABRB3-202ENST00000311550 GUSBP1Q15486 140 aa13.88□□□□□ -0.19
GABRB3-202ENST00000311550 CIRBPQ14011 172 aaKnown RBP13.88□□□□□ -0.19
GABRB3-202ENST00000311550 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.87□□□□□ -0.19
GABRB3-202ENST00000311550 EFNA4P52798 201 aa13.87□□□□□ -0.19
GABRB3-202ENST00000311550 FAM215AQ9Y5M1 114 aa13.87□□□□□ -0.19
GABRB3-202ENST00000311550 PLA2G2CQ5R387 149 aa13.87□□□□□ -0.19
GABRB3-202ENST00000311550 CDPF1Q6NVV7 123 aa13.87□□□□□ -0.19
GABRB3-202ENST00000311550 Q8TCH9 128 aa13.87□□□□□ -0.19
GABRB3-202ENST00000311550 MALRD1Q5VYJ5 2156 aa13.87□□□□□ -0.19
GABRB3-202ENST00000311550 SHANK2-AS3Q9BTD1 123 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms