RNA–Protein interactions for RNA: ENST00000306324.3

HOXD4-201, Transcript of homeobox D4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD4, Length 1,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4-201ENST00000306324 BORCS7-ASMTA0A0B4J1R7 106 aa16.67■□□□□ 0.26
HOXD4-201ENST00000306324 OR11H12B2RN74 326 aa16.67■□□□□ 0.26
HOXD4-201ENST00000306324 ZNF345Q14585 488 aa16.67■□□□□ 0.26
HOXD4-201ENST00000306324 FFAR4Q5NUL3 377 aa16.67■□□□□ 0.26
HOXD4-201ENST00000306324 MORN5Q5VZ52 161 aa16.67■□□□□ 0.26
HOXD4-201ENST00000306324 RPL7L1Q6DKI1 246 aaKnown RBP16.67■□□□□ 0.26
HOXD4-201ENST00000306324 GATAD1Q8WUU5 269 aa16.67■□□□□ 0.26
HOXD4-201ENST00000306324 GPR82Q96P67 336 aa16.67■□□□□ 0.26
HOXD4-201ENST00000306324 RNF24Q9Y225 148 aa16.67■□□□□ 0.26
HOXD4-201ENST00000306324 TRAV2A0A0B4J234 112 aa16.67■□□□□ 0.26
HOXD4-201ENST00000306324 K7EQG2 157 aa16.67■□□□□ 0.26
HOXD4-201ENST00000306324 TAAR5O14804 337 aa16.67■□□□□ 0.26
HOXD4-201ENST00000306324 KCNRGQ8N5I3 272 aa16.67■□□□□ 0.26
HOXD4-201ENST00000306324 DEFB125Q8N687 156 aa16.67■□□□□ 0.26
HOXD4-201ENST00000306324 DCANP1Q8TF63 244 aa16.67■□□□□ 0.26
HOXD4-201ENST00000306324 RPL7P18124 248 aaKnown RBP16.66■□□□□ 0.26
HOXD4-201ENST00000306324 CD300CQ08708 224 aa16.66■□□□□ 0.26
HOXD4-201ENST00000306324 ODF3L2Q3SX64 289 aa16.66■□□□□ 0.26
HOXD4-201ENST00000306324 FAM24BQ8N5W8 94 aa16.66■□□□□ 0.26
HOXD4-201ENST00000306324 A0A0D9SG52 128 aa16.65■□□□□ 0.26
HOXD4-201ENST00000306324 C1QBP02746 253 aa16.65■□□□□ 0.26
HOXD4-201ENST00000306324 IGHV4-30-4P0DP06 118 aa16.65■□□□□ 0.26
HOXD4-201ENST00000306324 CXCL2P19875 107 aa16.65■□□□□ 0.26
HOXD4-201ENST00000306324 ATP6V0CP27449 155 aa16.65■□□□□ 0.26
HOXD4-201ENST00000306324 FAM78BQ5VT40 261 aa16.65■□□□□ 0.26
HOXD4-201ENST00000306324 ARPC5LQ9BPX5 153 aa16.65■□□□□ 0.26
HOXD4-201ENST00000306324 TUBA4BQ9H853 241 aa16.65■□□□□ 0.26
HOXD4-201ENST00000306324 C19orf73Q9NVV2 129 aa16.65■□□□□ 0.26
HOXD4-201ENST00000306324 TIMM9Q9Y5J7 89 aa16.65■□□□□ 0.26
HOXD4-201ENST00000306324 TRAV5A0A0B4J249 113 aa16.64■□□□□ 0.25
HOXD4-201ENST00000306324 ATF4P18848 351 aaPredicted RBP16.64■□□□□ 0.25
HOXD4-201ENST00000306324 MAP6D1Q9H9H5 199 aa16.64■□□□□ 0.25
HOXD4-201ENST00000306324 JTBO76095 146 aa16.63■□□□□ 0.25
HOXD4-201ENST00000306324 ZNF688P0C7X2 276 aa16.63■□□□□ 0.25
HOXD4-201ENST00000306324 BPIFA4PQ86YQ2 179 aa16.63■□□□□ 0.25
HOXD4-201ENST00000306324 SEPSECSQ9HD40 501 aaKnown RBP16.63■□□□□ 0.25
HOXD4-201ENST00000306324 KANTRA0A1W2PQU2 76 aa16.62■□□□□ 0.25
HOXD4-201ENST00000306324 CMC4P56277 68 aaPredicted RBP16.62■□□□□ 0.25
HOXD4-201ENST00000306324 APRG1Q8IVJ8 170 aa16.62■□□□□ 0.25
HOXD4-201ENST00000306324 SH3BGRL3Q9H299 93 aa16.62■□□□□ 0.25
HOXD4-201ENST00000306324 SRD5A3Q9H8P0 318 aa16.62■□□□□ 0.25
HOXD4-201ENST00000306324 CYTL1Q9NRR1 136 aa16.62■□□□□ 0.25
HOXD4-201ENST00000306324 AGRNO00468 2067 aa16.61■□□□□ 0.25
HOXD4-201ENST00000306324 PFDN1O60925 122 aa16.61■□□□□ 0.25
HOXD4-201ENST00000306324 DEFB131AP59861 70 aa16.61■□□□□ 0.25
HOXD4-201ENST00000306324 SPATA31B1PQ5VZV4 182 aa16.61■□□□□ 0.25
HOXD4-201ENST00000306324 MIR17HGQ75NE6 70 aa16.61■□□□□ 0.25
HOXD4-201ENST00000306324 GNPNAT1Q96EK6 184 aaPredicted RBP16.61■□□□□ 0.25
HOXD4-201ENST00000306324 HYLS1Q96M11 299 aa16.61■□□□□ 0.25
HOXD4-201ENST00000306324 FAM110AQ9BQ89 295 aa16.61■□□□□ 0.25
HOXD4-201ENST00000306324 PSMG3Q9BT73 122 aaPredicted RBP16.61■□□□□ 0.25
HOXD4-201ENST00000306324 SNRPCP09234 159 aaKnown RBP16.61■□□□□ 0.25
HOXD4-201ENST00000306324 MEOX2P50222 304 aa16.61■□□□□ 0.25
HOXD4-201ENST00000306324 SNRPD3P62318 126 aaKnown RBP16.61■□□□□ 0.25
HOXD4-201ENST00000306324 ZNF124Q15973 351 aa16.61■□□□□ 0.25
HOXD4-201ENST00000306324 ACOT6Q3I5F7 207 aaPredicted RBP16.61■□□□□ 0.25
HOXD4-201ENST00000306324 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.61■□□□□ 0.25
HOXD4-201ENST00000306324 TMUB2Q71RG4 321 aa16.61■□□□□ 0.25
HOXD4-201ENST00000306324 MRPL32Q9BYC8 188 aaKnown RBP16.61■□□□□ 0.25
HOXD4-201ENST00000306324 MRPS12O15235 138 aaKnown RBP16.6■□□□□ 0.25
HOXD4-201ENST00000306324 BCL2L11O43521 198 aa16.6■□□□□ 0.25
HOXD4-201ENST00000306324 FRMD6-AS1P0C7T7 363 aa16.6■□□□□ 0.25
HOXD4-201ENST00000306324 M6PRP20645 277 aa16.6■□□□□ 0.25
HOXD4-201ENST00000306324 ID1P41134 155 aa16.6■□□□□ 0.25
HOXD4-201ENST00000306324 PSMG4Q5JS54 123 aa16.6■□□□□ 0.25
HOXD4-201ENST00000306324 C16orf92Q96LL3 132 aa16.6■□□□□ 0.25
HOXD4-201ENST00000306324 C17orf77Q96MU5 243 aa16.6■□□□□ 0.25
HOXD4-201ENST00000306324 FUT9Q9Y231 359 aa16.6■□□□□ 0.25
HOXD4-201ENST00000306324 RAB2AP61019 212 aa16.59■□□□□ 0.25
HOXD4-201ENST00000306324 RHOBP62745 196 aa16.59■□□□□ 0.25
HOXD4-201ENST00000306324 ZFP69Q49AA0 526 aa16.59■□□□□ 0.25
HOXD4-201ENST00000306324 OR2G3Q8NGZ4 309 aa16.59■□□□□ 0.25
HOXD4-201ENST00000306324 LINC00052Q96N35 136 aa16.59■□□□□ 0.25
HOXD4-201ENST00000306324 CITED4Q96RK1 184 aa16.59■□□□□ 0.25
HOXD4-201ENST00000306324 ZNF471Q9BX82 626 aaPredicted RBP16.59■□□□□ 0.25
HOXD4-201ENST00000306324 A8MZ25 164 aa16.58■□□□□ 0.24
HOXD4-201ENST00000306324 SOCS3O14543 225 aa16.58■□□□□ 0.24
HOXD4-201ENST00000306324 SERF2P84101 59 aa16.58■□□□□ 0.24
HOXD4-201ENST00000306324 LGALSLQ3ZCW2 172 aaPredicted RBP16.58■□□□□ 0.24
HOXD4-201ENST00000306324 SAMD13Q5VXD3 122 aa16.58■□□□□ 0.24
HOXD4-201ENST00000306324 LRRC20Q8TCA0 184 aa16.58■□□□□ 0.24
HOXD4-201ENST00000306324 SLC25A2Q9BXI2 301 aa16.58■□□□□ 0.24
HOXD4-201ENST00000306324 A0A087X0K7 114 aa16.57■□□□□ 0.24
HOXD4-201ENST00000306324 ISLRO14498 428 aa16.57■□□□□ 0.24
HOXD4-201ENST00000306324 PSMB3P49720 205 aa16.57■□□□□ 0.24
HOXD4-201ENST00000306324 OR10G4Q8NGN3 311 aa16.57■□□□□ 0.24
HOXD4-201ENST00000306324 OR10G9Q8NGN4 311 aa16.57■□□□□ 0.24
HOXD4-201ENST00000306324 OR10G7Q8NGN6 311 aa16.57■□□□□ 0.24
HOXD4-201ENST00000306324 A0A1W2PPV4 95 aa16.56■□□□□ 0.24
HOXD4-201ENST00000306324 H3BTX0 84 aa16.56■□□□□ 0.24
HOXD4-201ENST00000306324 PYYP10082 97 aa16.56■□□□□ 0.24
HOXD4-201ENST00000306324 FAM122CQ6P4D5 195 aa16.56■□□□□ 0.24
HOXD4-201ENST00000306324 MBP02144 154 aa16.55■□□□□ 0.24
HOXD4-201ENST00000306324 IGLC2P0DOY2 106 aa16.55■□□□□ 0.24
HOXD4-201ENST00000306324 IGFL4Q6B9Z1 124 aa16.55■□□□□ 0.24
HOXD4-201ENST00000306324 FAM167A-AS1Q96KT0 104 aa16.55■□□□□ 0.24
HOXD4-201ENST00000306324 HRH4Q9H3N8 390 aa16.55■□□□□ 0.24
HOXD4-201ENST00000306324 TMEM14CQ9P0S9 112 aa16.55■□□□□ 0.24
HOXD4-201ENST00000306324 DNAH9Q9NYC9 4486 aa16.55■□□□□ 0.24
HOXD4-201ENST00000306324 RBMY1BA6NDE4 496 aaKnown RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms