RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 GNG5P63218 68 aa11.12□□□□□ -0.63
RTFDC1-201ENST00000023939 FAM231DQ6ZW35 169 aa11.12□□□□□ -0.63
RTFDC1-201ENST00000023939 BAGE2Q86Y30 109 aa11.12□□□□□ -0.63
RTFDC1-201ENST00000023939 BCL6BQ8N143 479 aaPredicted RBP11.12□□□□□ -0.63
RTFDC1-201ENST00000023939 FMC1Q96HJ9 113 aa11.12□□□□□ -0.63
RTFDC1-201ENST00000023939 SAV1Q9H4B6 383 aaPredicted RBP11.12□□□□□ -0.63
RTFDC1-201ENST00000023939 ZFAND3Q9H8U3 227 aa11.12□□□□□ -0.63
RTFDC1-201ENST00000023939 RABAC1Q9UI14 185 aa11.12□□□□□ -0.63
RTFDC1-201ENST00000023939 HELZ2Q9BYK8 2649 aaKnown RBP11.11□□□□□ -0.63
RTFDC1-201ENST00000023939 TRGC2P03986 189 aa11.11□□□□□ -0.63
RTFDC1-201ENST00000023939 SNRPCP09234 159 aaKnown RBP11.11□□□□□ -0.63
RTFDC1-201ENST00000023939 RPL7P18124 248 aaKnown RBP11.11□□□□□ -0.63
RTFDC1-201ENST00000023939 RAB9AP51151 201 aa11.11□□□□□ -0.63
RTFDC1-201ENST00000023939 ERVFC1-1P60608 527 aa11.11□□□□□ -0.63
RTFDC1-201ENST00000023939 OR5I1Q13606 314 aa11.11□□□□□ -0.63
RTFDC1-201ENST00000023939 DEFB112Q30KQ8 113 aa11.11□□□□□ -0.63
RTFDC1-201ENST00000023939 TOMM20LQ6UXN7 152 aa11.11□□□□□ -0.63
RTFDC1-201ENST00000023939 SIGLEC15Q6ZMC9 328 aa11.11□□□□□ -0.63
RTFDC1-201ENST00000023939 ARL6IP6Q8N6S5 226 aa11.11□□□□□ -0.63
RTFDC1-201ENST00000023939 OR5R1Q8NH85 324 aa11.11□□□□□ -0.63
RTFDC1-201ENST00000023939 AP4M1O00189 453 aa11.1□□□□□ -0.63
RTFDC1-201ENST00000023939 UBE2CO00762 179 aa11.1□□□□□ -0.63
RTFDC1-201ENST00000023939 IER3P46695 156 aa11.1□□□□□ -0.63
RTFDC1-201ENST00000023939 UBE2G1P62253 170 aa11.1□□□□□ -0.63
RTFDC1-201ENST00000023939 C9orf152Q5JTZ5 239 aa11.1□□□□□ -0.63
RTFDC1-201ENST00000023939 USMG5Q96IX5 58 aa11.1□□□□□ -0.63
RTFDC1-201ENST00000023939 GPR82Q96P67 336 aa11.1□□□□□ -0.63
RTFDC1-201ENST00000023939 MS4A10Q96PG2 267 aa11.1□□□□□ -0.63
RTFDC1-201ENST00000023939 TRAV34A0A0B4J273 112 aa11.09□□□□□ -0.63
RTFDC1-201ENST00000023939 H3BTX0 84 aa11.09□□□□□ -0.63
RTFDC1-201ENST00000023939 ZNF253O75346 499 aa11.09□□□□□ -0.63
RTFDC1-201ENST00000023939 LTAP01374 205 aa11.09□□□□□ -0.63
RTFDC1-201ENST00000023939 SNRPEP62304 92 aaKnown RBP11.09□□□□□ -0.63
RTFDC1-201ENST00000023939 RELQ04864 619 aaPredicted RBP11.09□□□□□ -0.63
RTFDC1-201ENST00000023939 CLEC19AQ6UXS0 136 aa11.09□□□□□ -0.63
RTFDC1-201ENST00000023939 MAPK1IP1LQ8NDC0 245 aa11.09□□□□□ -0.63
RTFDC1-201ENST00000023939 Q96MF0 132 aa11.09□□□□□ -0.63
RTFDC1-201ENST00000023939 MLST8Q9BVC4 326 aa11.09□□□□□ -0.63
RTFDC1-201ENST00000023939 PRDM13Q9H4Q3 707 aa11.09□□□□□ -0.63
RTFDC1-201ENST00000023939 FBN2P35556 2912 aa11.09□□□□□ -0.63
RTFDC1-201ENST00000023939 HIST1H2BKO60814 126 aa11.09□□□□□ -0.63
RTFDC1-201ENST00000023939 TRGV3P03979 118 aa11.09□□□□□ -0.63
RTFDC1-201ENST00000023939 HIST1H2BJP06899 126 aa11.09□□□□□ -0.63
RTFDC1-201ENST00000023939 HIST1H2BOP23527 126 aa11.09□□□□□ -0.63
RTFDC1-201ENST00000023939 HIST1H2BBP33778 126 aa11.09□□□□□ -0.63
RTFDC1-201ENST00000023939 HIST1H2BDP58876 126 aa11.09□□□□□ -0.63
RTFDC1-201ENST00000023939 HIST1H2BCP62807 126 aa11.09□□□□□ -0.63
RTFDC1-201ENST00000023939 BLCAPP62952 87 aa11.09□□□□□ -0.63
RTFDC1-201ENST00000023939 CFHR3Q02985 330 aa11.09□□□□□ -0.63
RTFDC1-201ENST00000023939 HIST2H2BEQ16778 126 aa11.09□□□□□ -0.63
RTFDC1-201ENST00000023939 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.09□□□□□ -0.63
RTFDC1-201ENST00000023939 CMTM2Q8TAZ6 248 aa11.09□□□□□ -0.63
RTFDC1-201ENST00000023939 HIST1H2BHQ93079 126 aa11.09□□□□□ -0.63
RTFDC1-201ENST00000023939 HIST1H2BNQ99877 126 aa11.09□□□□□ -0.63
RTFDC1-201ENST00000023939 HIST1H2BMQ99879 126 aa11.09□□□□□ -0.63
RTFDC1-201ENST00000023939 PTPN13Q12923 2485 aa11.08□□□□□ -0.64
RTFDC1-201ENST00000023939 SLC17A3O00476 420 aa11.08□□□□□ -0.64
RTFDC1-201ENST00000023939 IGLV1-40P01703 118 aa11.08□□□□□ -0.64
RTFDC1-201ENST00000023939 MGST1P10620 155 aaKnown RBP11.08□□□□□ -0.64
RTFDC1-201ENST00000023939 PSG9Q00887 426 aa11.08□□□□□ -0.64
RTFDC1-201ENST00000023939 RPEL1Q2QD12 228 aa11.08□□□□□ -0.64
RTFDC1-201ENST00000023939 IBA57Q5T440 356 aaKnown RBP11.08□□□□□ -0.64
RTFDC1-201ENST00000023939 C1orf194Q5T5A4 169 aa11.08□□□□□ -0.64
RTFDC1-201ENST00000023939 CYB5R2Q6BCY4 276 aa11.08□□□□□ -0.64
RTFDC1-201ENST00000023939 EXOC3-AS1Q8N2X6 119 aa11.08□□□□□ -0.64
RTFDC1-201ENST00000023939 FRZBQ92765 325 aa11.08□□□□□ -0.64
RTFDC1-201ENST00000023939 C17orf77Q96MU5 243 aa11.08□□□□□ -0.64
RTFDC1-201ENST00000023939 RNASE7Q9H1E1 156 aaKnown RBP11.08□□□□□ -0.64
RTFDC1-201ENST00000023939 USP9YO00507 2555 aaPredicted RBP11.08□□□□□ -0.64
RTFDC1-201ENST00000023939 CR1P17927 2039 aa11.08□□□□□ -0.64
RTFDC1-201ENST00000023939 PRRC2AP48634 2157 aaKnown RBP11.07□□□□□ -0.64
RTFDC1-201ENST00000023939 IGHV4-59P01825 116 aa11.07□□□□□ -0.64
RTFDC1-201ENST00000023939 ACTL10Q5JWF8 245 aa11.07□□□□□ -0.64
RTFDC1-201ENST00000023939 LINC00527Q9UJ94 153 aa11.07□□□□□ -0.64
RTFDC1-201ENST00000023939 ANKRD17O75179 2603 aaKnown RBP11.07□□□□□ -0.64
RTFDC1-201ENST00000023939 A0A087X0K7 114 aa11.06□□□□□ -0.64
RTFDC1-201ENST00000023939 SERTM2A0A1B0GWG4 89 aa11.06□□□□□ -0.64
RTFDC1-201ENST00000023939 ZNF320A2RRD8 509 aa11.06□□□□□ -0.64
RTFDC1-201ENST00000023939 CLPSL1A2RUU4 121 aa11.06□□□□□ -0.64
RTFDC1-201ENST00000023939 BUB3O43684 328 aa11.06□□□□□ -0.64
RTFDC1-201ENST00000023939 IGLV2-11P01706 119 aa11.06□□□□□ -0.64
RTFDC1-201ENST00000023939 TRGC1P0CF51 173 aa11.06□□□□□ -0.64
RTFDC1-201ENST00000023939 RPL15P61313 204 aaKnown RBP11.06□□□□□ -0.64
RTFDC1-201ENST00000023939 Q6YL49 198 aa11.06□□□□□ -0.64
RTFDC1-201ENST00000023939 OR8I2Q8N0Y5 310 aa11.06□□□□□ -0.64
RTFDC1-201ENST00000023939 TMEM75Q8N9X5 138 aa11.06□□□□□ -0.64
RTFDC1-201ENST00000023939 ZNF492Q9P255 531 aa11.06□□□□□ -0.64
RTFDC1-201ENST00000023939 U3KQE9 123 aa11.06□□□□□ -0.64
RTFDC1-201ENST00000023939 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.06□□□□□ -0.64
RTFDC1-201ENST00000023939 SMIM27A0A1W2PRY6 76 aa11.06□□□□□ -0.64
RTFDC1-201ENST00000023939 TPPP2P59282 170 aa11.06□□□□□ -0.64
RTFDC1-201ENST00000023939 FABP9Q0Z7S8 132 aa11.06□□□□□ -0.64
RTFDC1-201ENST00000023939 SMUG1Q53HV7 270 aa11.06□□□□□ -0.64
RTFDC1-201ENST00000023939 Q6ZS46 218 aa11.06□□□□□ -0.64
RTFDC1-201ENST00000023939 Q86TA4 180 aa11.06□□□□□ -0.64
RTFDC1-201ENST00000023939 TMEM183AQ8IXX5 376 aa11.06□□□□□ -0.64
RTFDC1-201ENST00000023939 NOL4LQ96MY1 436 aaPredicted RBP11.06□□□□□ -0.64
RTFDC1-201ENST00000023939 AAMDCQ9H7C9 122 aa11.06□□□□□ -0.64
RTFDC1-201ENST00000023939 SMAD5-AS1Q9Y6J3 95 aa11.06□□□□□ -0.64
RTFDC1-201ENST00000023939 ASH1LQ9NR48 2969 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms