RNA–Protein interactions for RNA: ENST00000640554.1

SDHD-209, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 5

Gene SDHD, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-209ENST00000640554 AOX1Q06278 1338 aa17.42■□□□□ 0.38
SDHD-209ENST00000640554 POLR2AP24928 1970 aaKnown RBP17.41■□□□□ 0.38
SDHD-209ENST00000640554 GPR75-ASB3A0A0A6YYF3 556 aa17.41■□□□□ 0.38
SDHD-209ENST00000640554 UBE2Q2LH0YL09 131 aa17.41■□□□□ 0.38
SDHD-209ENST00000640554 NBPF12Q5TAG4 269 aaPredicted RBP17.41■□□□□ 0.38
SDHD-209ENST00000640554 FAM151AQ8WW52 585 aa17.41■□□□□ 0.38
SDHD-209ENST00000640554 TEPSINQ96N21 525 aa17.41■□□□□ 0.38
SDHD-209ENST00000640554 MROH7-TTC4A0A0A0MT08 1334 aa17.41■□□□□ 0.38
SDHD-209ENST00000640554 APBB1O00213 710 aa17.4■□□□□ 0.38
SDHD-209ENST00000640554 CA12O43570 354 aa17.4■□□□□ 0.38
SDHD-209ENST00000640554 NPM3O75607 178 aaKnown RBP17.4■□□□□ 0.38
SDHD-209ENST00000640554 CYP2E1P05181 493 aaPredicted RBP17.4■□□□□ 0.38
SDHD-209ENST00000640554 SLC10A3P09131 477 aa17.4■□□□□ 0.38
SDHD-209ENST00000640554 HSPA1AP0DMV8 641 aaKnown RBP17.4■□□□□ 0.38
SDHD-209ENST00000640554 HSPA1BP0DMV9 641 aaKnown RBP17.4■□□□□ 0.38
SDHD-209ENST00000640554 GRM1Q13255 1194 aa17.4■□□□□ 0.38
SDHD-209ENST00000640554 TTF1Q15361 905 aaPredicted RBP17.4■□□□□ 0.38
SDHD-209ENST00000640554 PI16Q6UXB8 463 aa17.4■□□□□ 0.38
SDHD-209ENST00000640554 TBC1D9Q6ZT07 1266 aa17.4■□□□□ 0.38
SDHD-209ENST00000640554 CERS3Q8IU89 383 aa17.4■□□□□ 0.38
SDHD-209ENST00000640554 NOL10Q9BSC4 688 aaKnown RBP17.4■□□□□ 0.38
SDHD-209ENST00000640554 IDI2Q9BXS1 227 aa17.4■□□□□ 0.38
SDHD-209ENST00000640554 SNRKQ9NRH2 765 aa17.4■□□□□ 0.38
SDHD-209ENST00000640554 TLR7Q9NYK1 1049 aaKnown RBP17.4■□□□□ 0.38
SDHD-209ENST00000640554 ANGEL1Q9UNK9 670 aaKnown RBP17.4■□□□□ 0.38
SDHD-209ENST00000640554 PAPPA2Q9BXP8 1791 aa17.4■□□□□ 0.38
SDHD-209ENST00000640554 FAM155AB1AL88 458 aaPredicted RBP17.39■□□□□ 0.37
SDHD-209ENST00000640554 ENTPD3O75355 529 aa17.39■□□□□ 0.37
SDHD-209ENST00000640554 BAG3O95817 575 aa17.39■□□□□ 0.37
SDHD-209ENST00000640554 PLCG2P16885 1265 aa17.39■□□□□ 0.37
SDHD-209ENST00000640554 ZAP70P43403 619 aa17.39■□□□□ 0.37
SDHD-209ENST00000640554 DCAF15Q66K64 600 aa17.39■□□□□ 0.37
SDHD-209ENST00000640554 SLC10A4Q96EP9 437 aa17.39■□□□□ 0.37
SDHD-209ENST00000640554 CRBNQ96SW2 442 aa17.39■□□□□ 0.37
SDHD-209ENST00000640554 TMEM39BQ9GZU3 492 aa17.39■□□□□ 0.37
SDHD-209ENST00000640554 PCDHB15Q9Y5E8 787 aa17.39■□□□□ 0.37
SDHD-209ENST00000640554 RPAP1Q9BWH6 1393 aaPredicted RBP17.39■□□□□ 0.37
SDHD-209ENST00000640554 USP2O75604 605 aaPredicted RBP17.38■□□□□ 0.37
SDHD-209ENST00000640554 NAA16Q6N069 864 aaPredicted RBP17.38■□□□□ 0.37
SDHD-209ENST00000640554 ANKRD13AQ8IZ07 590 aa17.38■□□□□ 0.37
SDHD-209ENST00000640554 AOC2O75106 756 aa17.37■□□□□ 0.37
SDHD-209ENST00000640554 ATP5JP18859 108 aa17.37■□□□□ 0.37
SDHD-209ENST00000640554 BTDP43251 543 aa17.37■□□□□ 0.37
SDHD-209ENST00000640554 CTCFP49711 727 aaPredicted RBP17.37■□□□□ 0.37
SDHD-209ENST00000640554 CACNB3P54284 484 aa17.37■□□□□ 0.37
SDHD-209ENST00000640554 PPP4CP60510 307 aa17.37■□□□□ 0.37
SDHD-209ENST00000640554 MAP3K12Q12852 859 aa17.37■□□□□ 0.37
SDHD-209ENST00000640554 PRKG1Q13976 671 aa17.37■□□□□ 0.37
SDHD-209ENST00000640554 MOB2Q70IA6 237 aa17.37■□□□□ 0.37
SDHD-209ENST00000640554 RASAL3Q86YV0 1011 aa17.37■□□□□ 0.37
SDHD-209ENST00000640554 INHBEP58166 350 aa17.36■□□□□ 0.37
SDHD-209ENST00000640554 MAP3K9P80192 1104 aa17.36■□□□□ 0.37
SDHD-209ENST00000640554 ZNF384Q8TF68 577 aa17.36■□□□□ 0.37
SDHD-209ENST00000640554 ECM29Q5VYK3 1845 aa17.35■□□□□ 0.37
SDHD-209ENST00000640554 MYH13Q9UKX3 1938 aa17.35■□□□□ 0.37
SDHD-209ENST00000640554 RHBDL3P58872 404 aa17.35■□□□□ 0.37
SDHD-209ENST00000640554 KIF23Q02241 960 aaPredicted RBP17.35■□□□□ 0.37
SDHD-209ENST00000640554 HDAC1Q13547 482 aaPredicted RBP17.35■□□□□ 0.37
SDHD-209ENST00000640554 GPATCH3Q96I76 525 aa17.35■□□□□ 0.37
SDHD-209ENST00000640554 PIH1D3Q9NQM4 214 aaKnown RBP17.35■□□□□ 0.37
SDHD-209ENST00000640554 ZBTB47Q9UFB7 747 aaPredicted RBP17.35■□□□□ 0.37
SDHD-209ENST00000640554 FAM198AQ9UFP1 575 aa17.35■□□□□ 0.37
SDHD-209ENST00000640554 WDHD1O75717 1129 aaPredicted RBP17.34■□□□□ 0.37
SDHD-209ENST00000640554 IDH1O75874 414 aaKnown RBP17.34■□□□□ 0.37
SDHD-209ENST00000640554 ZBTB48P10074 688 aaPredicted RBP17.34■□□□□ 0.37
SDHD-209ENST00000640554 RGS3P49796 1198 aa17.34■□□□□ 0.37
SDHD-209ENST00000640554 TCP10Q12799 353 aa17.34■□□□□ 0.37
SDHD-209ENST00000640554 NFIAQ12857 509 aa17.34■□□□□ 0.37
SDHD-209ENST00000640554 GCC1Q96CN9 775 aa17.34■□□□□ 0.37
SDHD-209ENST00000640554 ZNF341Q9BYN7 854 aa17.34■□□□□ 0.37
SDHD-209ENST00000640554 SUPT16HQ9Y5B9 1047 aaKnown RBP17.34■□□□□ 0.37
SDHD-209ENST00000640554 CSADQ9Y600 493 aa17.34■□□□□ 0.37
SDHD-209ENST00000640554 SSC5DA1L4H1 1573 aa17.33■□□□□ 0.37
SDHD-209ENST00000640554 SREBF2Q12772 1141 aa17.33■□□□□ 0.36
SDHD-209ENST00000640554 SPRYD7Q5W111 196 aa17.33■□□□□ 0.36
SDHD-209ENST00000640554 RWDD1Q9H446 243 aaPredicted RBP17.33■□□□□ 0.36
SDHD-209ENST00000640554 ECHDC1Q9NTX5 307 aa17.33■□□□□ 0.36
SDHD-209ENST00000640554 SAGE1Q9NXZ1 904 aa17.33■□□□□ 0.36
SDHD-209ENST00000640554 CYP7A1P22680 504 aa17.32■□□□□ 0.36
SDHD-209ENST00000640554 TM4SF4P48230 202 aa17.32■□□□□ 0.36
SDHD-209ENST00000640554 ZSCAN29Q8IWY8 852 aaPredicted RBP17.32■□□□□ 0.36
SDHD-209ENST00000640554 TEX11Q8IYF3 940 aa17.32■□□□□ 0.36
SDHD-209ENST00000640554 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.32■□□□□ 0.36
SDHD-209ENST00000640554 CSRNP1Q96S65 589 aa17.32■□□□□ 0.36
SDHD-209ENST00000640554 HAUS7Q99871 368 aa17.32■□□□□ 0.36
SDHD-209ENST00000640554 PRDM10Q9NQV6 1147 aa17.32■□□□□ 0.36
SDHD-209ENST00000640554 MANSC4A6NHS7 340 aaPredicted RBP17.31■□□□□ 0.36
SDHD-209ENST00000640554 FOXN1O15353 648 aa17.31■□□□□ 0.36
SDHD-209ENST00000640554 MAP3K10Q02779 954 aa17.31■□□□□ 0.36
SDHD-209ENST00000640554 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.31■□□□□ 0.36
SDHD-209ENST00000640554 DHX36Q9H2U1 1008 aaKnown RBP17.31■□□□□ 0.36
SDHD-209ENST00000640554 PAG1Q9NWQ8 432 aa17.31■□□□□ 0.36
SDHD-209ENST00000640554 ZNF112Q9UJU3 913 aa17.31■□□□□ 0.36
SDHD-209ENST00000640554 THSD7BQ9C0I4 1608 aa17.31■□□□□ 0.36
SDHD-209ENST00000640554 RFX7Q2KHR2 1363 aa17.3■□□□□ 0.36
SDHD-209ENST00000640554 GOLIM4O00461 696 aa17.3■□□□□ 0.36
SDHD-209ENST00000640554 SMARCA5O60264 1052 aaPredicted RBP17.3■□□□□ 0.36
SDHD-209ENST00000640554 TBC1D12O60347 775 aa17.3■□□□□ 0.36
SDHD-209ENST00000640554 ZSCAN25Q6NSZ9 544 aa17.3■□□□□ 0.36
SDHD-209ENST00000640554 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms