RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 USP48Q86UV5 1035 aa16■□□□□ 0.15
GTF3A-209ENST00000640289 CNTROBQ8N137 903 aa16■□□□□ 0.15
GTF3A-209ENST00000640289 ZNF532Q9HCE3 1301 aa15.99■□□□□ 0.15
GTF3A-209ENST00000640289 TCRBV5S4A2TA0A5A2 114 aa15.99■□□□□ 0.15
GTF3A-209ENST00000640289 IGSF3O75054 1194 aa15.99■□□□□ 0.15
GTF3A-209ENST00000640289 ADD2P35612 726 aa15.99■□□□□ 0.15
GTF3A-209ENST00000640289 KRT26Q7Z3Y9 468 aa15.99■□□□□ 0.15
GTF3A-209ENST00000640289 MIGA1Q8NAN2 632 aa15.99■□□□□ 0.15
GTF3A-209ENST00000640289 USP40Q9NVE5 1235 aa15.99■□□□□ 0.15
GTF3A-209ENST00000640289 AATFQ9NY61 560 aaKnown RBP eCLIP15.99■□□□□ 0.15
GTF3A-209ENST00000640289 MAST2Q6P0Q8 1798 aa15.99■□□□□ 0.15
GTF3A-209ENST00000640289 DOCK2Q92608 1830 aa15.98■□□□□ 0.15
GTF3A-209ENST00000640289 PITPNM2Q9BZ72 1349 aa15.98■□□□□ 0.15
GTF3A-209ENST00000640289 TRIM6-TRIM34B2RNG4 842 aa15.98■□□□□ 0.15
GTF3A-209ENST00000640289 TCP10L2B9ZVM9 353 aa15.98■□□□□ 0.15
GTF3A-209ENST00000640289 TRAF5O00463 557 aa15.98■□□□□ 0.15
GTF3A-209ENST00000640289 ITGBL1O95965 494 aaPredicted RBP15.98■□□□□ 0.15
GTF3A-209ENST00000640289 GSPT1P15170 499 aaKnown RBP15.98■□□□□ 0.15
GTF3A-209ENST00000640289 RGS3P49796 1198 aa15.98■□□□□ 0.15
GTF3A-209ENST00000640289 DYNLL1P63167 89 aaKnown RBP15.98■□□□□ 0.15
GTF3A-209ENST00000640289 TTC22Q5TAA0 569 aa15.98■□□□□ 0.15
GTF3A-209ENST00000640289 CDC37L1Q7L3B6 337 aa15.98■□□□□ 0.15
GTF3A-209ENST00000640289 RILPL2Q969X0 211 aa15.98■□□□□ 0.15
GTF3A-209ENST00000640289 EVI5LQ96CN4 794 aa15.98■□□□□ 0.15
GTF3A-209ENST00000640289 FSD1Q9BTV5 496 aa15.98■□□□□ 0.15
GTF3A-209ENST00000640289 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.98■□□□□ 0.15
GTF3A-209ENST00000640289 MYO5AQ9Y4I1 1855 aaKnown RBP15.98■□□□□ 0.15
GTF3A-209ENST00000640289 RHBDL3P58872 404 aa15.97■□□□□ 0.15
GTF3A-209ENST00000640289 NFIAQ12857 509 aa15.97■□□□□ 0.15
GTF3A-209ENST00000640289 PRAMEF18Q5VWM3 479 aa15.97■□□□□ 0.15
GTF3A-209ENST00000640289 APOBEC3FQ8IUX4 373 aaKnown RBP15.97■□□□□ 0.15
GTF3A-209ENST00000640289 SULF1Q8IWU6 871 aa15.97■□□□□ 0.15
GTF3A-209ENST00000640289 RNF113AO15541 343 aaKnown RBP15.96■□□□□ 0.15
GTF3A-209ENST00000640289 FSTL1Q12841 308 aa15.96■□□□□ 0.15
GTF3A-209ENST00000640289 UBE3CQ15386 1083 aa15.96■□□□□ 0.15
GTF3A-209ENST00000640289 ZSCAN25Q6NSZ9 544 aa15.96■□□□□ 0.15
GTF3A-209ENST00000640289 SH3RF3Q8TEJ3 882 aaPredicted RBP15.96■□□□□ 0.15
GTF3A-209ENST00000640289 NOL10Q9BSC4 688 aaKnown RBP15.96■□□□□ 0.15
GTF3A-209ENST00000640289 TMOD2Q9NZR1 351 aa15.96■□□□□ 0.15
GTF3A-209ENST00000640289 MYH2Q9UKX2 1941 aa15.96■□□□□ 0.14
GTF3A-209ENST00000640289 WDHD1O75717 1129 aaPredicted RBP15.95■□□□□ 0.14
GTF3A-209ENST00000640289 BAG3O95817 575 aa15.95■□□□□ 0.14
GTF3A-209ENST00000640289 PPP4CP60510 307 aa15.95■□□□□ 0.14
GTF3A-209ENST00000640289 RIOK1Q9BRS2 568 aaKnown RBP15.95■□□□□ 0.14
GTF3A-209ENST00000640289 PUS7LQ9H0K6 701 aaKnown RBP15.95■□□□□ 0.14
GTF3A-209ENST00000640289 DEFB129Q9H1M3 183 aa15.95■□□□□ 0.14
GTF3A-209ENST00000640289 DDX4Q9NQI0 724 aaKnown RBP15.95■□□□□ 0.14
GTF3A-209ENST00000640289 CNTNAP1P78357 1384 aa15.95■□□□□ 0.14
GTF3A-209ENST00000640289 PASKQ96RG2 1323 aa15.94■□□□□ 0.14
GTF3A-209ENST00000640289 MAGEB6P1A0A0J9YX57 407 aa15.94■□□□□ 0.14
GTF3A-209ENST00000640289 TCP10Q12799 353 aa15.94■□□□□ 0.14
GTF3A-209ENST00000640289 PICALMQ13492 652 aa15.94■□□□□ 0.14
GTF3A-209ENST00000640289 RASA3Q14644 834 aa15.94■□□□□ 0.14
GTF3A-209ENST00000640289 TMED8Q6PL24 325 aaPredicted RBP15.94■□□□□ 0.14
GTF3A-209ENST00000640289 CDAN1Q8IWY9 1227 aa15.94■□□□□ 0.14
GTF3A-209ENST00000640289 TEX11Q8IYF3 940 aa15.94■□□□□ 0.14
GTF3A-209ENST00000640289 LCORLQ8N3X6 602 aa15.94■□□□□ 0.14
GTF3A-209ENST00000640289 OSBP2Q969R2 916 aa15.94■□□□□ 0.14
GTF3A-209ENST00000640289 CDCA5Q96FF9 252 aa15.94■□□□□ 0.14
GTF3A-209ENST00000640289 TMEM39BQ9GZU3 492 aa15.94■□□□□ 0.14
GTF3A-209ENST00000640289 FAM198AQ9UFP1 575 aa15.94■□□□□ 0.14
GTF3A-209ENST00000640289 RFX7Q2KHR2 1363 aa15.94■□□□□ 0.14
GTF3A-209ENST00000640289 MBD4O95243 580 aa15.93■□□□□ 0.14
GTF3A-209ENST00000640289 ZFYP08048 801 aaPredicted RBP15.93■□□□□ 0.14
GTF3A-209ENST00000640289 SDSP20132 328 aa15.93■□□□□ 0.14
GTF3A-209ENST00000640289 TNNI2P48788 182 aa15.93■□□□□ 0.14
GTF3A-209ENST00000640289 TNFAIP1Q13829 316 aa15.93■□□□□ 0.14
GTF3A-209ENST00000640289 ZFPM1Q8IX07 1006 aa15.93■□□□□ 0.14
GTF3A-209ENST00000640289 APPBP2Q92624 585 aa15.93■□□□□ 0.14
GTF3A-209ENST00000640289 SEC62Q99442 399 aaKnown RBP15.93■□□□□ 0.14
GTF3A-209ENST00000640289 IDI2Q9BXS1 227 aa15.93■□□□□ 0.14
GTF3A-209ENST00000640289 ARMT1Q9H993 441 aa15.93■□□□□ 0.14
GTF3A-209ENST00000640289 ZNF408Q9H9D4 720 aa15.93■□□□□ 0.14
GTF3A-209ENST00000640289 M0R2C6 588 aa15.92■□□□□ 0.14
GTF3A-209ENST00000640289 PLCG2P16885 1265 aa15.92■□□□□ 0.14
GTF3A-209ENST00000640289 C1QTNF8P60827 252 aa15.92■□□□□ 0.14
GTF3A-209ENST00000640289 LRRFIP1Q32MZ4 808 aaKnown RBP15.92■□□□□ 0.14
GTF3A-209ENST00000640289 ZMYM1Q5SVZ6 1142 aa15.92■□□□□ 0.14
GTF3A-209ENST00000640289 FKBP1CQ5VVH2 108 aa15.92■□□□□ 0.14
GTF3A-209ENST00000640289 TGFBRAP1Q8WUH2 860 aa15.92■□□□□ 0.14
GTF3A-209ENST00000640289 GTF3C3Q9Y5Q9 886 aa15.92■□□□□ 0.14
GTF3A-209ENST00000640289 ECM29Q5VYK3 1845 aa15.91■□□□□ 0.14
GTF3A-209ENST00000640289 CELF2O95319 508 aaKnown RBP15.91■□□□□ 0.14
GTF3A-209ENST00000640289 NBPF12Q5TAG4 269 aaPredicted RBP15.91■□□□□ 0.14
GTF3A-209ENST00000640289 FAM83AQ86UY5 434 aa15.91■□□□□ 0.14
GTF3A-209ENST00000640289 MAPKAPK5Q8IW41 473 aa15.91■□□□□ 0.14
GTF3A-209ENST00000640289 FAM151AQ8WW52 585 aa15.91■□□□□ 0.14
GTF3A-209ENST00000640289 AIDAQ96BJ3 306 aa15.91■□□□□ 0.14
GTF3A-209ENST00000640289 FAM227BQ96M60 508 aa15.91■□□□□ 0.14
GTF3A-209ENST00000640289 TEPSINQ96N21 525 aa15.91■□□□□ 0.14
GTF3A-209ENST00000640289 PPP2R3BQ9Y5P8 575 aa15.91■□□□□ 0.14
GTF3A-209ENST00000640289 A0A0D9SFI3 127 aa15.9■□□□□ 0.14
GTF3A-209ENST00000640289 PRKAB2O43741 272 aa15.9■□□□□ 0.14
GTF3A-209ENST00000640289 ENTPD3O75355 529 aa15.9■□□□□ 0.14
GTF3A-209ENST00000640289 NMIQ13287 307 aaPredicted RBP15.9■□□□□ 0.14
GTF3A-209ENST00000640289 CST9Q5W186 159 aa15.9■□□□□ 0.14
GTF3A-209ENST00000640289 SH3BP5LQ7L8J4 393 aa15.9■□□□□ 0.14
GTF3A-209ENST00000640289 CERS3Q8IU89 383 aa15.9■□□□□ 0.14
GTF3A-209ENST00000640289 SDR42E1Q8WUS8 393 aa15.9■□□□□ 0.14
GTF3A-209ENST00000640289 FZD1Q9UP38 647 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms