RNA–Protein interactions for RNA: ENST00000639667.1

HNRNPU-220, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 2

Gene HNRNPU, Length 3,940 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-220ENST00000639667 MROH7-TTC4A0A0A0MT08 1334 aa6.95□□□□□ -1.3
HNRNPU-220ENST00000639667 MCM9Q9NXL9 1143 aa6.95□□□□□ -1.3
HNRNPU-220ENST00000639667 ZNF70Q9UC06 446 aaPredicted RBP6.95□□□□□ -1.3
HNRNPU-220ENST00000639667 GPAA1O43292 621 aa6.95□□□□□ -1.3
HNRNPU-220ENST00000639667 PRKAB2O43741 272 aa6.95□□□□□ -1.3
HNRNPU-220ENST00000639667 EGFRP00533 1210 aa6.95□□□□□ -1.3
HNRNPU-220ENST00000639667 TNFAIP1Q13829 316 aa6.95□□□□□ -1.3
HNRNPU-220ENST00000639667 RRP12Q5JTH9 1297 aaKnown RBP6.95□□□□□ -1.3
HNRNPU-220ENST00000639667 LCORLQ8N3X6 602 aa6.95□□□□□ -1.3
HNRNPU-220ENST00000639667 SDR42E1Q8WUS8 393 aa6.95□□□□□ -1.3
HNRNPU-220ENST00000639667 NAPBQ9H115 298 aa6.95□□□□□ -1.3
HNRNPU-220ENST00000639667 SERPINA10Q9UK55 444 aa6.95□□□□□ -1.3
HNRNPU-220ENST00000639667 ASTN2O75129 1339 aaPredicted RBP6.94□□□□□ -1.3
HNRNPU-220ENST00000639667 ZC3H4Q9UPT8 1303 aaKnown RBP6.94□□□□□ -1.3
HNRNPU-220ENST00000639667 WNT10BO00744 389 aa6.94□□□□□ -1.3
HNRNPU-220ENST00000639667 RAD21O60216 631 aa6.94□□□□□ -1.3
HNRNPU-220ENST00000639667 MCMDC2Q4G0Z9 681 aa6.94□□□□□ -1.3
HNRNPU-220ENST00000639667 HHIPL2Q6UWX4 724 aa6.94□□□□□ -1.3
HNRNPU-220ENST00000639667 OSBP2Q969R2 916 aa6.94□□□□□ -1.3
HNRNPU-220ENST00000639667 GLIS2Q9BZE0 524 aaPredicted RBP6.94□□□□□ -1.3
HNRNPU-220ENST00000639667 PUS7LQ9H0K6 701 aaKnown RBP6.94□□□□□ -1.3
HNRNPU-220ENST00000639667 OSBPL3Q9H4L5 887 aa6.94□□□□□ -1.3
HNRNPU-220ENST00000639667 IRS2Q9Y4H2 1338 aa6.94□□□□□ -1.3
HNRNPU-220ENST00000639667 SPDYE2BA6NHP3 402 aa6.94□□□□□ -1.3
HNRNPU-220ENST00000639667 HLA-DOAP06340 250 aa6.94□□□□□ -1.3
HNRNPU-220ENST00000639667 POTEIP0CG38 1075 aa6.94□□□□□ -1.3
HNRNPU-220ENST00000639667 POTEJP0CG39 1038 aa6.94□□□□□ -1.3
HNRNPU-220ENST00000639667 SPDYE6P0CI01 402 aa6.94□□□□□ -1.3
HNRNPU-220ENST00000639667 FKBP1AP62942 108 aaKnown RBP6.94□□□□□ -1.3
HNRNPU-220ENST00000639667 UBE3CQ15386 1083 aa6.94□□□□□ -1.3
HNRNPU-220ENST00000639667 BMP2KLQ5H9B9 411 aa6.94□□□□□ -1.3
HNRNPU-220ENST00000639667 CDC42EP5Q6NZY7 148 aa6.94□□□□□ -1.3
HNRNPU-220ENST00000639667 UPF2Q9HAU5 1272 aaKnown RBP6.94□□□□□ -1.3
HNRNPU-220ENST00000639667 A0A0D9SFI3 127 aa6.94□□□□□ -1.3
HNRNPU-220ENST00000639667 USP50Q70EL3 339 aaPredicted RBP6.94□□□□□ -1.3
HNRNPU-220ENST00000639667 ADM5C9JUS6 153 aa6.93□□□□□ -1.3
HNRNPU-220ENST00000639667 M0R2C6 588 aa6.93□□□□□ -1.3
HNRNPU-220ENST00000639667 MPHOSPH10O00566 681 aaKnown RBP6.93□□□□□ -1.3
HNRNPU-220ENST00000639667 CHMLP26374 656 aa6.93□□□□□ -1.3
HNRNPU-220ENST00000639667 HAND2P61296 217 aa6.93□□□□□ -1.3
HNRNPU-220ENST00000639667 RASA3Q14644 834 aa6.93□□□□□ -1.3
HNRNPU-220ENST00000639667 MIGA2Q7L4E1 593 aa6.93□□□□□ -1.3
HNRNPU-220ENST00000639667 ZNF784Q8NCA9 323 aaPredicted RBP6.93□□□□□ -1.3
HNRNPU-220ENST00000639667 SALL1Q9NSC2 1324 aa6.93□□□□□ -1.3
HNRNPU-220ENST00000639667 HDLBPQ00341 1268 aaKnown RBP6.93□□□□□ -1.3
HNRNPU-220ENST00000639667 ATP2B2Q01814 1243 aa6.93□□□□□ -1.3
HNRNPU-220ENST00000639667 DLK2Q6UY11 383 aa6.93□□□□□ -1.3
HNRNPU-220ENST00000639667 ADGRA1Q86SQ6 560 aa6.93□□□□□ -1.3
HNRNPU-220ENST00000639667 GMLQ99445 158 aa6.93□□□□□ -1.3
HNRNPU-220ENST00000639667 KIF13BQ9NQT8 1826 aa6.93□□□□□ -1.3
HNRNPU-220ENST00000639667 ZMYM1Q5SVZ6 1142 aa6.93□□□□□ -1.3
HNRNPU-220ENST00000639667 APOBEC3FQ8IUX4 373 aaKnown RBP6.93□□□□□ -1.3
HNRNPU-220ENST00000639667 ZDHHC15Q96MV8 337 aa6.93□□□□□ -1.3
HNRNPU-220ENST00000639667 TMEM39BQ9GZU3 492 aa6.93□□□□□ -1.3
HNRNPU-220ENST00000639667 HELLSQ9NRZ9 838 aa6.93□□□□□ -1.3
HNRNPU-220ENST00000639667 PALD1Q9ULE6 856 aa6.93□□□□□ -1.3
HNRNPU-220ENST00000639667 NAP1L2Q9ULW6 460 aaPredicted RBP6.93□□□□□ -1.3
HNRNPU-220ENST00000639667 COL1A1P02452 1464 aaPredicted RBP6.92□□□□□ -1.3
HNRNPU-220ENST00000639667 DUOX1Q9NRD9 1551 aa6.92□□□□□ -1.3
HNRNPU-220ENST00000639667 PDS5AQ29RF7 1337 aaKnown RBP6.92□□□□□ -1.3
HNRNPU-220ENST00000639667 SALL3Q9BXA9 1300 aa6.92□□□□□ -1.3
HNRNPU-220ENST00000639667 SLC3A2P08195 630 aaKnown RBP6.92□□□□□ -1.3
HNRNPU-220ENST00000639667 NFIAQ12857 509 aa6.92□□□□□ -1.3
HNRNPU-220ENST00000639667 APOBEC3HQ6NTF7 200 aaKnown RBP6.92□□□□□ -1.3
HNRNPU-220ENST00000639667 CDC37L1Q7L3B6 337 aa6.92□□□□□ -1.3
HNRNPU-220ENST00000639667 CHMP4CQ96CF2 233 aa6.92□□□□□ -1.3
HNRNPU-220ENST00000639667 DEFB129Q9H1M3 183 aa6.92□□□□□ -1.3
HNRNPU-220ENST00000639667 MKNK2Q9HBH9 465 aa6.92□□□□□ -1.3
HNRNPU-220ENST00000639667 MTMR7Q9Y216 660 aa6.92□□□□□ -1.3
HNRNPU-220ENST00000639667 MCCP23508 829 aa6.92□□□□□ -1.3
HNRNPU-220ENST00000639667 HIRAP54198 1017 aaPredicted RBP6.92□□□□□ -1.3
HNRNPU-220ENST00000639667 ZNF280AP59817 542 aaPredicted RBP6.92□□□□□ -1.3
HNRNPU-220ENST00000639667 FGD1P98174 961 aa6.92□□□□□ -1.3
HNRNPU-220ENST00000639667 SAMD1Q6SPF0 538 aaPredicted RBP6.92□□□□□ -1.3
HNRNPU-220ENST00000639667 CSRNP1Q96S65 589 aa6.92□□□□□ -1.3
HNRNPU-220ENST00000639667 CCDC171Q6TFL3 1326 aa6.92□□□□□ -1.3
HNRNPU-220ENST00000639667 COL4A5P29400 1685 aa6.92□□□□□ -1.3
HNRNPU-220ENST00000639667 GPR75-ASB3A0A0A6YYF3 556 aa6.92□□□□□ -1.3
HNRNPU-220ENST00000639667 FAM196BA6NMK8 535 aa6.92□□□□□ -1.3
HNRNPU-220ENST00000639667 USP17L12C9JPN9 530 aa6.92□□□□□ -1.3
HNRNPU-220ENST00000639667 USP17L21D6R901 530 aa6.92□□□□□ -1.3
HNRNPU-220ENST00000639667 TRAF5O00463 557 aa6.92□□□□□ -1.3
HNRNPU-220ENST00000639667 GNAT2P19087 354 aa6.92□□□□□ -1.3
HNRNPU-220ENST00000639667 CHADLQ6NUI6 762 aa6.92□□□□□ -1.3
HNRNPU-220ENST00000639667 TTC6Q86TZ1 520 aa6.92□□□□□ -1.3
HNRNPU-220ENST00000639667 LDHDQ86WU2 507 aa6.92□□□□□ -1.3
HNRNPU-220ENST00000639667 L3MBTL3Q96JM7 780 aaPredicted RBP6.92□□□□□ -1.3
HNRNPU-220ENST00000639667 ABT1Q9ULW3 272 aaKnown RBP6.92□□□□□ -1.3
HNRNPU-220ENST00000639667 CYP2D7A0A087X1C5 515 aa6.91□□□□□ -1.3
HNRNPU-220ENST00000639667 REC8O95072 547 aa6.91□□□□□ -1.3
HNRNPU-220ENST00000639667 CELF2O95319 508 aaKnown RBP6.91□□□□□ -1.3
HNRNPU-220ENST00000639667 SUPT20HL1Q3ZLR7 823 aa6.91□□□□□ -1.3
HNRNPU-220ENST00000639667 ZNF589Q86UQ0 364 aaPredicted RBP6.91□□□□□ -1.3
HNRNPU-220ENST00000639667 SNED1Q8TER0 1413 aa6.91□□□□□ -1.3
HNRNPU-220ENST00000639667 PPP1R12BO60237 982 aaPredicted RBP6.91□□□□□ -1.3
HNRNPU-220ENST00000639667 FMR1Q06787 632 aaKnown RBP eCLIP6.91□□□□□ -1.34e-16■□□□□ 10.2
HNRNPU-220ENST00000639667 SPDYE2Q495Y8 402 aa6.91□□□□□ -1.3
HNRNPU-220ENST00000639667 CERS3Q8IU89 383 aa6.91□□□□□ -1.3
HNRNPU-220ENST00000639667 STRBPQ96SI9 672 aaKnown RBP6.91□□□□□ -1.3
HNRNPU-220ENST00000639667 ESYT1Q9BSJ8 1104 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms