RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 OTUD7BQ6GQQ9 843 aa20.76■□□□□ 0.91
SCARB2-213ENST00000638680 TTC16Q8NEE8 873 aa20.76■□□□□ 0.91
SCARB2-213ENST00000638680 MAPK8IP1Q9UQF2 711 aa20.76■□□□□ 0.91
SCARB2-213ENST00000638680 DUOX2Q9NRD8 1548 aa20.76■□□□□ 0.91
SCARB2-213ENST00000638680 POLR2DO15514 142 aaKnown RBP20.76■□□□□ 0.91
SCARB2-213ENST00000638680 LONRF3Q496Y0 759 aa20.76■□□□□ 0.91
SCARB2-213ENST00000638680 IMPG2Q9BZV3 1241 aa20.75■□□□□ 0.91
SCARB2-213ENST00000638680 SGSM2O43147 1006 aa20.75■□□□□ 0.91
SCARB2-213ENST00000638680 OAS2P29728 719 aaKnown RBP20.75■□□□□ 0.91
SCARB2-213ENST00000638680 TTLL12Q14166 644 aaPredicted RBP20.75■□□□□ 0.91
SCARB2-213ENST00000638680 TRAF5O00463 557 aa20.75■□□□□ 0.91
SCARB2-213ENST00000638680 PDE4DQ08499 809 aa20.75■□□□□ 0.91
SCARB2-213ENST00000638680 TRAF1Q13077 416 aa20.75■□□□□ 0.91
SCARB2-213ENST00000638680 A0A1W2PP64 1363 aa20.75■□□□□ 0.91
SCARB2-213ENST00000638680 ZNF202O95125 648 aa20.75■□□□□ 0.91
SCARB2-213ENST00000638680 MBD4O95243 580 aa20.75■□□□□ 0.91
SCARB2-213ENST00000638680 AKNAD1Q5T1N1 836 aa20.75■□□□□ 0.91
SCARB2-213ENST00000638680 NIP7Q9Y221 180 aaKnown RBP eCLIP20.75■□□□□ 0.91
SCARB2-213ENST00000638680 INPP5BP32019 993 aa20.74■□□□□ 0.91
SCARB2-213ENST00000638680 INTS8Q75QN2 995 aaKnown RBP20.74■□□□□ 0.91
SCARB2-213ENST00000638680 AOX1Q06278 1338 aa20.74■□□□□ 0.91
SCARB2-213ENST00000638680 ST5P78524 1137 aa20.74■□□□□ 0.91
SCARB2-213ENST00000638680 AEBP2Q6ZN18 517 aaPredicted RBP20.74■□□□□ 0.91
SCARB2-213ENST00000638680 STIM2Q9P246 746 aa20.74■□□□□ 0.91
SCARB2-213ENST00000638680 LETM2Q2VYF4 491 aa20.74■□□□□ 0.91
SCARB2-213ENST00000638680 BCL2L12Q9HB09 334 aa20.74■□□□□ 0.91
SCARB2-213ENST00000638680 NKIRAS1Q9NYS0 192 aa20.74■□□□□ 0.91
SCARB2-213ENST00000638680 DENND4BO75064 1496 aaPredicted RBP20.74■□□□□ 0.91
SCARB2-213ENST00000638680 IRS4O14654 1257 aaPredicted RBP20.73■□□□□ 0.91
SCARB2-213ENST00000638680 DEXIO95424 95 aa20.73■□□□□ 0.91
SCARB2-213ENST00000638680 ATP6V1AP38606 617 aa20.73■□□□□ 0.91
SCARB2-213ENST00000638680 PLCD1P51178 756 aa20.73■□□□□ 0.91
SCARB2-213ENST00000638680 EYA1Q99502 592 aa20.73■□□□□ 0.91
SCARB2-213ENST00000638680 CUTAO60888 179 aa20.73■□□□□ 0.91
SCARB2-213ENST00000638680 TNNI3KQ59H18 835 aa20.73■□□□□ 0.91
SCARB2-213ENST00000638680 SECISBP2LQ93073 1101 aaKnown RBP20.73■□□□□ 0.91
SCARB2-213ENST00000638680 ZNF622Q969S3 477 aaKnown RBP eCLIP20.73■□□□□ 0.91
SCARB2-213ENST00000638680 FPGT-TNNI3KV9GXZ4 949 aa20.73■□□□□ 0.91
SCARB2-213ENST00000638680 ABCC1P33527 1531 aa20.73■□□□□ 0.91
SCARB2-213ENST00000638680 ARHGAP6O43182 974 aa20.73■□□□□ 0.91
SCARB2-213ENST00000638680 MYCNP04198 464 aaPredicted RBP20.72■□□□□ 0.91
SCARB2-213ENST00000638680 ATP2A2P16615 1042 aaKnown RBP20.72■□□□□ 0.91
SCARB2-213ENST00000638680 MTX1Q13505 466 aa20.72■□□□□ 0.91
SCARB2-213ENST00000638680 PIK3AP1Q6ZUJ8 805 aa20.72■□□□□ 0.91
SCARB2-213ENST00000638680 DPH6Q7L8W6 267 aa20.72■□□□□ 0.91
SCARB2-213ENST00000638680 TSC1Q92574 1164 aa20.72■□□□□ 0.91
SCARB2-213ENST00000638680 SETDB2Q96T68 719 aa20.72■□□□□ 0.91
SCARB2-213ENST00000638680 NPATQ14207 1427 aa20.72■□□□□ 0.91
SCARB2-213ENST00000638680 ZNF804AQ7Z570 1209 aa20.72■□□□□ 0.91
SCARB2-213ENST00000638680 CCDC65Q8IXS2 484 aa20.72■□□□□ 0.91
SCARB2-213ENST00000638680 NLRP3Q96P20 1036 aa20.72■□□□□ 0.91
SCARB2-213ENST00000638680 PAK1Q13153 545 aa20.72■□□□□ 0.91
SCARB2-213ENST00000638680 MLKLQ8NB16 471 aa20.72■□□□□ 0.91
SCARB2-213ENST00000638680 POTEDQ86YR6 584 aa20.72■□□□□ 0.91
SCARB2-213ENST00000638680 IFT20Q8IY31 132 aa20.72■□□□□ 0.91
SCARB2-213ENST00000638680 RIMS2Q9UQ26 1411 aa20.72■□□□□ 0.91
SCARB2-213ENST00000638680 RPL13P26373 211 aaKnown RBP20.72■□□□□ 0.91
SCARB2-213ENST00000638680 ARL1P40616 181 aaPredicted RBP20.72■□□□□ 0.91
SCARB2-213ENST00000638680 DMRT2Q9Y5R5 561 aa20.71■□□□□ 0.91
SCARB2-213ENST00000638680 GOLGA6BA6NDN3 693 aa20.71■□□□□ 0.91
SCARB2-213ENST00000638680 PABPN1LA6NDY0 278 aaKnown RBP20.71■□□□□ 0.91
SCARB2-213ENST00000638680 PPP1R2P41236 205 aa20.71■□□□□ 0.91
SCARB2-213ENST00000638680 TIMM10P62072 90 aa20.71■□□□□ 0.91
SCARB2-213ENST00000638680 CSGALNACT2Q8N6G5 542 aa20.71■□□□□ 0.91
SCARB2-213ENST00000638680 TMEM87BQ96K49 555 aa20.71■□□□□ 0.91
SCARB2-213ENST00000638680 TCHPQ9BT92 498 aa20.71■□□□□ 0.91
SCARB2-213ENST00000638680 TRIM7Q9C029 511 aa20.71■□□□□ 0.91
SCARB2-213ENST00000638680 SWAP70Q9UH65 585 aa20.71■□□□□ 0.91
SCARB2-213ENST00000638680 ATP11AP98196 1134 aa20.71■□□□□ 0.91
SCARB2-213ENST00000638680 DZIP3Q86Y13 1208 aaKnown RBP20.71■□□□□ 0.91
SCARB2-213ENST00000638680 ITSN2Q9NZM3 1697 aa20.71■□□□□ 0.91
SCARB2-213ENST00000638680 ATP5DP30049 168 aa20.7■□□□□ 0.9
SCARB2-213ENST00000638680 PPFIBP2Q8ND30 876 aa20.7■□□□□ 0.9
SCARB2-213ENST00000638680 FAM212AQ96EL1 285 aa20.7■□□□□ 0.9
SCARB2-213ENST00000638680 PSMC4P43686 418 aa20.7■□□□□ 0.9
SCARB2-213ENST00000638680 MAP3K9P80192 1104 aa20.7■□□□□ 0.9
SCARB2-213ENST00000638680 PLCD3Q8N3E9 789 aa20.7■□□□□ 0.9
SCARB2-213ENST00000638680 IFT74Q96LB3 600 aa20.7■□□□□ 0.9
SCARB2-213ENST00000638680 NFE2L3Q9Y4A8 694 aa20.7■□□□□ 0.9
SCARB2-213ENST00000638680 PPARDQ03181 441 aa20.7■□□□□ 0.9
SCARB2-213ENST00000638680 CNNM4Q6P4Q7 775 aa20.7■□□□□ 0.9
SCARB2-213ENST00000638680 TMTC1Q8IUR5 882 aa20.7■□□□□ 0.9
SCARB2-213ENST00000638680 KLHDC4Q8TBB5 520 aa20.7■□□□□ 0.9
SCARB2-213ENST00000638680 NOX5Q96PH1 765 aa20.7■□□□□ 0.9
SCARB2-213ENST00000638680 NAP1L3Q99457 506 aaPredicted RBP20.7■□□□□ 0.9
SCARB2-213ENST00000638680 UTP11Q9Y3A2 253 aaKnown RBP20.7■□□□□ 0.9
SCARB2-213ENST00000638680 URB2Q14146 1524 aaKnown RBP20.7■□□□□ 0.9
SCARB2-213ENST00000638680 EPB41P11171 864 aaKnown RBP20.7■□□□□ 0.9
SCARB2-213ENST00000638680 TAB2Q9NYJ8 693 aa20.7■□□□□ 0.9
SCARB2-213ENST00000638680 ZBTB21Q9ULJ3 1066 aa20.7■□□□□ 0.9
SCARB2-213ENST00000638680 COL17A1Q9UMD9 1497 aaPredicted RBP20.7■□□□□ 0.9
SCARB2-213ENST00000638680 BRD1O95696 1058 aa20.7■□□□□ 0.9
SCARB2-213ENST00000638680 PARP1P09874 1014 aaKnown RBP20.7■□□□□ 0.9
SCARB2-213ENST00000638680 VWA3BQ502W6 1294 aa20.7■□□□□ 0.9
SCARB2-213ENST00000638680 DBNDD2Q9BQY9 259 aa20.7■□□□□ 0.9
SCARB2-213ENST00000638680 ZNF354CQ86Y25 554 aa20.69■□□□□ 0.9
SCARB2-213ENST00000638680 STMN2Q93045 179 aa20.69■□□□□ 0.9
SCARB2-213ENST00000638680 JAK2O60674 1132 aa20.69■□□□□ 0.9
SCARB2-213ENST00000638680 DIS3L2Q8IYB7 885 aaKnown RBP20.69■□□□□ 0.9
SCARB2-213ENST00000638680 ASIC2Q16515 512 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms