RNA–Protein interactions for RNA: ENST00000635856.1

CHD2-221, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-221ENST00000635856 PLB1Q6P1J6 1458 aa6.88□□□□□ -1.31
CHD2-221ENST00000635856 N4BP1O75113 896 aaKnown RBP6.87□□□□□ -1.31
CHD2-221ENST00000635856 ATP2C2O75185 946 aa6.87□□□□□ -1.31
CHD2-221ENST00000635856 RNF8O76064 485 aa6.87□□□□□ -1.31
CHD2-221ENST00000635856 CEBPZQ03701 1054 aaKnown RBP6.87□□□□□ -1.31
CHD2-221ENST00000635856 CCDC73Q6ZRK6 1079 aa6.87□□□□□ -1.31
CHD2-221ENST00000635856 BZW1Q7L1Q6 419 aaKnown RBP6.87□□□□□ -1.31
CHD2-221ENST00000635856 SRGAP1Q7Z6B7 1085 aa6.87□□□□□ -1.31
CHD2-221ENST00000635856 IGSF22Q8N9C0 903 aa6.87□□□□□ -1.31
CHD2-221ENST00000635856 NAP1L3Q99457 506 aaPredicted RBP6.87□□□□□ -1.31
CHD2-221ENST00000635856 ZFATQ9P243 1243 aa6.87□□□□□ -1.31
CHD2-221ENST00000635856 GOLGA8KD6RF30 607 aa6.87□□□□□ -1.31
CHD2-221ENST00000635856 EIF3HO15372 352 aaKnown RBP eCLIP6.87□□□□□ -1.313e-6■■□□□ 12.8
CHD2-221ENST00000635856 SYT1P21579 422 aa6.87□□□□□ -1.31
CHD2-221ENST00000635856 NEK2P51955 445 aa6.87□□□□□ -1.31
CHD2-221ENST00000635856 SREK1Q8WXA9 508 aaKnown RBP6.87□□□□□ -1.31
CHD2-221ENST00000635856 NECTIN2Q92692 538 aa6.87□□□□□ -1.31
CHD2-221ENST00000635856 OPTNQ96CV9 577 aa6.87□□□□□ -1.31
CHD2-221ENST00000635856 OSBPL1AQ9BXW6 950 aa6.87□□□□□ -1.31
CHD2-221ENST00000635856 SCAND2PQ9GZW5 306 aaPredicted RBP6.87□□□□□ -1.31
CHD2-221ENST00000635856 DNAJC5Q9H3Z4 198 aa6.87□□□□□ -1.31
CHD2-221ENST00000635856 PCDHGC5Q9Y5F6 944 aa6.87□□□□□ -1.31
CHD2-221ENST00000635856 FAM163BP0C2L3 166 aa6.87□□□□□ -1.31
CHD2-221ENST00000635856 ALDH3A1P30838 453 aa6.87□□□□□ -1.31
CHD2-221ENST00000635856 KCNJ6P48051 423 aa6.87□□□□□ -1.31
CHD2-221ENST00000635856 MAP7Q14244 749 aa6.87□□□□□ -1.31
CHD2-221ENST00000635856 KRT72Q14CN4 511 aa6.87□□□□□ -1.31
CHD2-221ENST00000635856 GALNT15Q8N3T1 639 aa6.87□□□□□ -1.31
CHD2-221ENST00000635856 MAIP1Q8WWC4 291 aa6.87□□□□□ -1.31
CHD2-221ENST00000635856 ZNF653Q96CK0 615 aa6.87□□□□□ -1.31
CHD2-221ENST00000635856 TSPYL2Q9H2G4 693 aaPredicted RBP6.87□□□□□ -1.31
CHD2-221ENST00000635856 VIPAS39Q9H9C1 493 aa6.87□□□□□ -1.31
CHD2-221ENST00000635856 SLC39A2Q9NP94 309 aa6.87□□□□□ -1.31
CHD2-221ENST00000635856 KCND1Q9NSA2 647 aa6.87□□□□□ -1.31
CHD2-221ENST00000635856 FBXO9Q9UK97 447 aaPredicted RBP6.87□□□□□ -1.31
CHD2-221ENST00000635856 SYNRGQ9UMZ2 1314 aa6.87□□□□□ -1.31
CHD2-221ENST00000635856 F13A1P00488 732 aa6.87□□□□□ -1.31
CHD2-221ENST00000635856 PDHBP11177 359 aa6.87□□□□□ -1.31
CHD2-221ENST00000635856 EIF4BP23588 611 aaKnown RBP6.87□□□□□ -1.31
CHD2-221ENST00000635856 PSME1Q06323 249 aa6.87□□□□□ -1.31
CHD2-221ENST00000635856 RCN1Q15293 331 aa6.87□□□□□ -1.31
CHD2-221ENST00000635856 PPP1R7Q15435 360 aa6.87□□□□□ -1.31
CHD2-221ENST00000635856 SARM1Q6SZW1 724 aa6.87□□□□□ -1.31
CHD2-221ENST00000635856 PNMA8AQ86V59 439 aaPredicted RBP6.87□□□□□ -1.31
CHD2-221ENST00000635856 WDR75Q8IWA0 830 aaKnown RBP6.87□□□□□ -1.31
CHD2-221ENST00000635856 CCDC13Q8IYE1 715 aa6.87□□□□□ -1.31
CHD2-221ENST00000635856 PDILTQ8N807 584 aa6.87□□□□□ -1.31
CHD2-221ENST00000635856 EHBP1Q8NDI1 1231 aa6.87□□□□□ -1.31
CHD2-221ENST00000635856 ZFAND2BQ8WV99 257 aa6.87□□□□□ -1.31
CHD2-221ENST00000635856 AGAP3Q96P47 875 aa6.87□□□□□ -1.31
CHD2-221ENST00000635856 IWS1Q96ST2 819 aa6.87□□□□□ -1.31
CHD2-221ENST00000635856 DACT1Q9NYF0 836 aa6.87□□□□□ -1.31
CHD2-221ENST00000635856 UGGT2Q9NYU1 1516 aa6.87□□□□□ -1.31
CHD2-221ENST00000635856 PBRM1Q86U86 1689 aa6.86□□□□□ -1.31
CHD2-221ENST00000635856 SCAF11Q99590 1463 aaKnown RBP6.86□□□□□ -1.31
CHD2-221ENST00000635856 EHBP1L1Q8N3D4 1523 aa6.86□□□□□ -1.31
CHD2-221ENST00000635856 F8VZ95 297 aa6.86□□□□□ -1.31
CHD2-221ENST00000635856 ATP5JP18859 108 aa6.86□□□□□ -1.31
CHD2-221ENST00000635856 PSMC4P43686 418 aa6.86□□□□□ -1.31
CHD2-221ENST00000635856 CCZ1BP86790 482 aa6.86□□□□□ -1.31
CHD2-221ENST00000635856 CCZ1P86791 482 aaPredicted RBP6.86□□□□□ -1.31
CHD2-221ENST00000635856 TSR1Q2NL82 804 aaKnown RBP6.86□□□□□ -1.31
CHD2-221ENST00000635856 MTHFD1LQ6UB35 978 aa6.86□□□□□ -1.31
CHD2-221ENST00000635856 LRRN4CLQ8ND94 238 aa6.86□□□□□ -1.31
CHD2-221ENST00000635856 SPATA32Q96LK8 384 aa6.86□□□□□ -1.31
CHD2-221ENST00000635856 SH3GL1Q99961 368 aa6.86□□□□□ -1.31
CHD2-221ENST00000635856 KAT14Q9H8E8 782 aa6.86□□□□□ -1.31
CHD2-221ENST00000635856 MTMR7Q9Y216 660 aa6.86□□□□□ -1.31
CHD2-221ENST00000635856 H7C1W4 665 aa6.86□□□□□ -1.31
CHD2-221ENST00000635856 LSM1O15116 133 aaKnown RBP6.86□□□□□ -1.31
CHD2-221ENST00000635856 EIF2S2P20042 333 aaKnown RBP6.86□□□□□ -1.31
CHD2-221ENST00000635856 ABL2P42684 1182 aa6.86□□□□□ -1.31
CHD2-221ENST00000635856 ARID5BQ14865 1188 aa6.86□□□□□ -1.31
CHD2-221ENST00000635856 ZNF394Q53GI3 561 aa6.86□□□□□ -1.31
CHD2-221ENST00000635856 BEND6Q5SZJ8 279 aaPredicted RBP6.86□□□□□ -1.31
CHD2-221ENST00000635856 DHRS1Q96LJ7 313 aa6.86□□□□□ -1.31
CHD2-221ENST00000635856 NAIPQ13075 1403 aa6.86□□□□□ -1.31
CHD2-221ENST00000635856 LRRIQ3A6PVS8 624 aaPredicted RBP6.86□□□□□ -1.31
CHD2-221ENST00000635856 FLOT1O75955 427 aa6.86□□□□□ -1.31
CHD2-221ENST00000635856 PPP2R1AP30153 589 aa6.86□□□□□ -1.31
CHD2-221ENST00000635856 DMPKQ09013 629 aa6.86□□□□□ -1.31
CHD2-221ENST00000635856 ZBTB17Q13105 803 aa6.86□□□□□ -1.31
CHD2-221ENST00000635856 INAQ16352 499 aa6.86□□□□□ -1.31
CHD2-221ENST00000635856 YTHDF3Q7Z739 585 aaKnown RBP6.86□□□□□ -1.31
CHD2-221ENST00000635856 ELOA2Q8IYF1 753 aaPredicted RBP6.86□□□□□ -1.31
CHD2-221ENST00000635856 TRMT2AQ8IZ69 625 aaKnown RBP6.86□□□□□ -1.31
CHD2-221ENST00000635856 SNRNP27Q8WVK2 155 aaKnown RBP6.86□□□□□ -1.31
CHD2-221ENST00000635856 FGD4Q96M96 766 aa6.86□□□□□ -1.31
CHD2-221ENST00000635856 RHBDL2Q9NX52 303 aa6.86□□□□□ -1.31
CHD2-221ENST00000635856 GALNT8Q9NY28 637 aa6.86□□□□□ -1.31
CHD2-221ENST00000635856 FAM184BQ9ULE4 1060 aa6.86□□□□□ -1.31
CHD2-221ENST00000635856 HSF2BPO75031 334 aa6.85□□□□□ -1.31
CHD2-221ENST00000635856 ATP4AP20648 1035 aa6.85□□□□□ -1.31
CHD2-221ENST00000635856 PDCP20941 246 aa6.85□□□□□ -1.31
CHD2-221ENST00000635856 TAF11Q15544 211 aa6.85□□□□□ -1.31
CHD2-221ENST00000635856 SLC44A4Q53GD3 710 aa6.85□□□□□ -1.31
CHD2-221ENST00000635856 IQCEQ6IPM2 695 aa6.85□□□□□ -1.31
CHD2-221ENST00000635856 RASSF8Q8NHQ8 419 aa6.85□□□□□ -1.31
CHD2-221ENST00000635856 FBF1Q8TES7 1133 aa6.85□□□□□ -1.31
CHD2-221ENST00000635856 GBP5Q96PP8 586 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms