RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 MYH13Q9UKX3 1938 aa6.39□□□□□ -1.39
SHMT1-211ENST00000618902 SPDYE2BA6NHP3 402 aa6.39□□□□□ -1.39
SHMT1-211ENST00000618902 CELF2O95319 508 aaKnown RBP6.39□□□□□ -1.39
SHMT1-211ENST00000618902 IFIT2P09913 472 aaKnown RBP6.39□□□□□ -1.39
SHMT1-211ENST00000618902 UQCRFS1P1P0C7P4 283 aa6.39□□□□□ -1.39
SHMT1-211ENST00000618902 SPDYE6P0CI01 402 aa6.39□□□□□ -1.39
SHMT1-211ENST00000618902 ATP5JP18859 108 aa6.39□□□□□ -1.39
SHMT1-211ENST00000618902 MAP3K11Q16584 847 aa6.39□□□□□ -1.39
SHMT1-211ENST00000618902 CFAP100Q494V2 611 aa6.39□□□□□ -1.39
SHMT1-211ENST00000618902 SLFNL1Q499Z3 407 aa6.39□□□□□ -1.39
SHMT1-211ENST00000618902 NOM1Q5C9Z4 860 aaKnown RBP6.39□□□□□ -1.39
SHMT1-211ENST00000618902 CST9Q5W186 159 aa6.39□□□□□ -1.39
SHMT1-211ENST00000618902 APOBEC3HQ6NTF7 200 aaKnown RBP6.39□□□□□ -1.39
SHMT1-211ENST00000618902 FAM83AQ86UY5 434 aa6.39□□□□□ -1.39
SHMT1-211ENST00000618902 PI4K2BQ8TCG2 481 aa6.39□□□□□ -1.39
SHMT1-211ENST00000618902 TEKT1Q969V4 418 aa6.39□□□□□ -1.39
SHMT1-211ENST00000618902 AIDAQ96BJ3 306 aa6.39□□□□□ -1.39
SHMT1-211ENST00000618902 GCC1Q96CN9 775 aa6.39□□□□□ -1.39
SHMT1-211ENST00000618902 FAM163AQ96GL9 167 aaPredicted RBP6.39□□□□□ -1.39
SHMT1-211ENST00000618902 PRMT6Q96LA8 375 aaPredicted RBP6.39□□□□□ -1.39
SHMT1-211ENST00000618902 ZDHHC15Q96MV8 337 aa6.39□□□□□ -1.39
SHMT1-211ENST00000618902 BACH2Q9BYV9 841 aa6.39□□□□□ -1.39
SHMT1-211ENST00000618902 BOLA2Q9H3K6 86 aa6.39□□□□□ -1.39
SHMT1-211ENST00000618902 PRDM10Q9NQV6 1147 aa6.39□□□□□ -1.39
SHMT1-211ENST00000618902 SAGE1Q9NXZ1 904 aa6.39□□□□□ -1.39
SHMT1-211ENST00000618902 ABT1Q9ULW3 272 aaKnown RBP6.39□□□□□ -1.39
SHMT1-211ENST00000618902 TTF2Q9UNY4 1162 aaKnown RBP6.39□□□□□ -1.39
SHMT1-211ENST00000618902 DAGLAQ9Y4D2 1042 aa6.39□□□□□ -1.39
SHMT1-211ENST00000618902 CENPFP49454 3210 aa6.38□□□□□ -1.39
SHMT1-211ENST00000618902 TRAF5O00463 557 aa6.38□□□□□ -1.39
SHMT1-211ENST00000618902 CRKP46108 304 aa6.38□□□□□ -1.39
SHMT1-211ENST00000618902 MECOMQ03112 1051 aa6.38□□□□□ -1.39
SHMT1-211ENST00000618902 CCDC158Q5M9N0 1113 aa6.38□□□□□ -1.39
SHMT1-211ENST00000618902 ARMC9Q7Z3E5 817 aa6.38□□□□□ -1.39
SHMT1-211ENST00000618902 ADGRA1Q86SQ6 560 aa6.38□□□□□ -1.39
SHMT1-211ENST00000618902 CHD1LQ86WJ1 897 aa6.38□□□□□ -1.39
SHMT1-211ENST00000618902 PLEKHM2Q8IWE5 1019 aa6.38□□□□□ -1.39
SHMT1-211ENST00000618902 CDAN1Q8IWY9 1227 aa6.38□□□□□ -1.39
SHMT1-211ENST00000618902 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.38□□□□□ -1.39
SHMT1-211ENST00000618902 NSUN4Q96CB9 384 aaKnown RBP6.38□□□□□ -1.39
SHMT1-211ENST00000618902 HAUS7Q99871 368 aa6.38□□□□□ -1.39
SHMT1-211ENST00000618902 GLIS2Q9BZE0 524 aaPredicted RBP6.38□□□□□ -1.39
SHMT1-211ENST00000618902 GBA2Q9HCG7 927 aaPredicted RBP6.38□□□□□ -1.39
SHMT1-211ENST00000618902 ECHDC1Q9NTX5 307 aa6.38□□□□□ -1.39
SHMT1-211ENST00000618902 WBP1LQ9NX94 342 aa6.38□□□□□ -1.39
SHMT1-211ENST00000618902 GGA3Q9NZ52 723 aa6.38□□□□□ -1.39
SHMT1-211ENST00000618902 TMOD2Q9NZR1 351 aa6.38□□□□□ -1.39
SHMT1-211ENST00000618902 STAP2Q9UGK3 403 aa6.38□□□□□ -1.39
SHMT1-211ENST00000618902 GAKO14976 1311 aa6.38□□□□□ -1.39
SHMT1-211ENST00000618902 WDR33Q9C0J8 1336 aaKnown RBP6.38□□□□□ -1.39
SHMT1-211ENST00000618902 CLRN2A0PK11 232 aa6.37□□□□□ -1.39
SHMT1-211ENST00000618902 ADM5C9JUS6 153 aa6.37□□□□□ -1.39
SHMT1-211ENST00000618902 GOLIM4O00461 696 aa6.37□□□□□ -1.39
SHMT1-211ENST00000618902 ALDH1A1P00352 501 aa6.37□□□□□ -1.39
SHMT1-211ENST00000618902 LDHBP07195 334 aaKnown RBP6.37□□□□□ -1.39
SHMT1-211ENST00000618902 ZBTB48P10074 688 aaPredicted RBP6.37□□□□□ -1.39
SHMT1-211ENST00000618902 CTCFP49711 727 aaPredicted RBP6.37□□□□□ -1.39
SHMT1-211ENST00000618902 VEGFBP49765 207 aa6.37□□□□□ -1.39
SHMT1-211ENST00000618902 CACNB3P54284 484 aa6.37□□□□□ -1.39
SHMT1-211ENST00000618902 PDE1AP54750 535 aa6.37□□□□□ -1.39
SHMT1-211ENST00000618902 HUNKP57058 714 aa6.37□□□□□ -1.39
SHMT1-211ENST00000618902 GSTO1P78417 241 aa6.37□□□□□ -1.39
SHMT1-211ENST00000618902 ANGEL2Q5VTE6 544 aaKnown RBP6.37□□□□□ -1.39
SHMT1-211ENST00000618902 RGMBQ6NW40 437 aa6.37□□□□□ -1.39
SHMT1-211ENST00000618902 USP48Q86UV5 1035 aa6.37□□□□□ -1.39
SHMT1-211ENST00000618902 TICAM2Q86XR7 235 aa6.37□□□□□ -1.39
SHMT1-211ENST00000618902 CAPNS2Q96L46 248 aa6.37□□□□□ -1.39
SHMT1-211ENST00000618902 DNAJC2Q99543 621 aaKnown RBP6.37□□□□□ -1.39
SHMT1-211ENST00000618902 CFHR5Q9BXR6 569 aa6.37□□□□□ -1.39
SHMT1-211ENST00000618902 DEFB129Q9H1M3 183 aa6.37□□□□□ -1.39
SHMT1-211ENST00000618902 TDRD3Q9H7E2 651 aaKnown RBP6.37□□□□□ -1.39
SHMT1-211ENST00000618902 ABCF2Q9UG63 623 aa6.37□□□□□ -1.39
SHMT1-211ENST00000618902 MYH2Q9UKX2 1941 aa6.37□□□□□ -1.39
SHMT1-211ENST00000618902 RFX7Q2KHR2 1363 aa6.36□□□□□ -1.39
SHMT1-211ENST00000618902 RPAP1Q9BWH6 1393 aaPredicted RBP6.36□□□□□ -1.39
SHMT1-211ENST00000618902 TCRBV5S4A2TA0A5A2 114 aa6.36□□□□□ -1.39
SHMT1-211ENST00000618902 EIF5BO60841 1220 aaKnown RBP6.36□□□□□ -1.39
SHMT1-211ENST00000618902 LDHCP07864 332 aa6.36□□□□□ -1.39
SHMT1-211ENST00000618902 SLURP2P0DP57 97 aa6.36□□□□□ -1.39
SHMT1-211ENST00000618902 PDE6AP16499 860 aa6.36□□□□□ -1.39
SHMT1-211ENST00000618902 PLCG2P16885 1265 aa6.36□□□□□ -1.39
SHMT1-211ENST00000618902 MX1P20591 662 aa6.36□□□□□ -1.39
SHMT1-211ENST00000618902 IREB2P48200 963 aaKnown RBP6.36□□□□□ -1.39
SHMT1-211ENST00000618902 RHBDL3P58872 404 aa6.36□□□□□ -1.39
SHMT1-211ENST00000618902 DYNLL1P63167 89 aaKnown RBP6.36□□□□□ -1.39
SHMT1-211ENST00000618902 SREBF2Q12772 1141 aa6.36□□□□□ -1.39
SHMT1-211ENST00000618902 NFIAQ12857 509 aa6.36□□□□□ -1.39
SHMT1-211ENST00000618902 SPDYE2Q495Y8 402 aa6.36□□□□□ -1.39
SHMT1-211ENST00000618902 PRAMEF18Q5VWM3 479 aa6.36□□□□□ -1.39
SHMT1-211ENST00000618902 OTUD7BQ6GQQ9 843 aa6.36□□□□□ -1.39
SHMT1-211ENST00000618902 CDC42EP5Q6NZY7 148 aa6.36□□□□□ -1.39
SHMT1-211ENST00000618902 ZFPM1Q8IX07 1006 aa6.36□□□□□ -1.39
SHMT1-211ENST00000618902 CDCA5Q96FF9 252 aa6.36□□□□□ -1.39
SHMT1-211ENST00000618902 ZCCHC17Q9NP64 241 aaKnown RBP6.36□□□□□ -1.39
SHMT1-211ENST00000618902 PAG1Q9NWQ8 432 aa6.36□□□□□ -1.39
SHMT1-211ENST00000618902 RAI14Q9P0K7 980 aa6.36□□□□□ -1.39
SHMT1-211ENST00000618902 ZNF70Q9UC06 446 aaPredicted RBP6.36□□□□□ -1.39
SHMT1-211ENST00000618902 DAXXQ9UER7 740 aaPredicted RBP6.36□□□□□ -1.39
SHMT1-211ENST00000618902 DOCK2Q92608 1830 aa6.36□□□□□ -1.39
SHMT1-211ENST00000618902 PAPPA2Q9BXP8 1791 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms