RNA–Protein interactions for RNA: ENST00000610535.4

TNIP1-220, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 5 BASIC

Gene TNIP1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-220ENST00000610535 TMEM139Q8IV31 216 aa19.52■□□□□ 0.71
TNIP1-220ENST00000610535 ZNF142P52746 1687 aaPredicted RBP19.51■□□□□ 0.71
TNIP1-220ENST00000610535 FOXN1O15353 648 aa19.51■□□□□ 0.71
TNIP1-220ENST00000610535 HNRNPH2P55795 449 aaKnown RBP19.51■□□□□ 0.71
TNIP1-220ENST00000610535 PHKBQ93100 1093 aa19.51■□□□□ 0.71
TNIP1-220ENST00000610535 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.51■□□□□ 0.71
TNIP1-220ENST00000610535 RGPD5Q99666 1765 aa19.51■□□□□ 0.71
TNIP1-220ENST00000610535 EFCAB8A8MWE9 144 aa19.51■□□□□ 0.71
TNIP1-220ENST00000610535 ZNF213O14771 459 aa19.51■□□□□ 0.71
TNIP1-220ENST00000610535 BMP6P22004 513 aa19.51■□□□□ 0.71
TNIP1-220ENST00000610535 PTPAQ15257 358 aa19.51■□□□□ 0.71
TNIP1-220ENST00000610535 SPECC1Q5M775 1068 aa19.51■□□□□ 0.71
TNIP1-220ENST00000610535 KRT40Q6A162 431 aa19.51■□□□□ 0.71
TNIP1-220ENST00000610535 PDILTQ8N807 584 aa19.51■□□□□ 0.71
TNIP1-220ENST00000610535 CCDC85AQ96PX6 553 aaPredicted RBP19.51■□□□□ 0.71
TNIP1-220ENST00000610535 ZBTB3Q9H5J0 574 aa19.51■□□□□ 0.71
TNIP1-220ENST00000610535 CEP126Q9P2H0 1117 aa19.51■□□□□ 0.71
TNIP1-220ENST00000610535 PCDHA5Q9Y5H7 936 aa19.51■□□□□ 0.71
TNIP1-220ENST00000610535 SASH3O75995 380 aa19.5■□□□□ 0.71
TNIP1-220ENST00000610535 MAPK8IP2Q13387 824 aaPredicted RBP19.5■□□□□ 0.71
TNIP1-220ENST00000610535 TTC39AQ5SRH9 613 aa19.5■□□□□ 0.71
TNIP1-220ENST00000610535 CALCOCO1Q9P1Z2 691 aa19.5■□□□□ 0.71
TNIP1-220ENST00000610535 NWD2Q9ULI1 1742 aa19.5■□□□□ 0.71
TNIP1-220ENST00000610535 VGLL3A8MV65 326 aa19.5■□□□□ 0.71
TNIP1-220ENST00000610535 UBE2Q2LH0YL09 131 aa19.5■□□□□ 0.71
TNIP1-220ENST00000610535 ZAP70P43403 619 aa19.5■□□□□ 0.71
TNIP1-220ENST00000610535 GNG11P61952 73 aa19.5■□□□□ 0.71
TNIP1-220ENST00000610535 GNL2Q13823 731 aaKnown RBP19.5■□□□□ 0.71
TNIP1-220ENST00000610535 SRRTQ9BXP5 876 aaKnown RBP19.5■□□□□ 0.71
TNIP1-220ENST00000610535 SENP2Q9HC62 589 aa19.5■□□□□ 0.71
TNIP1-220ENST00000610535 ARFGEF2Q9Y6D5 1785 aa19.5■□□□□ 0.71
TNIP1-220ENST00000610535 CABP4P57796 275 aa19.49■□□□□ 0.71
TNIP1-220ENST00000610535 FAM193AP78312 1265 aa19.49■□□□□ 0.71
TNIP1-220ENST00000610535 CCDC158Q5M9N0 1113 aa19.49■□□□□ 0.71
TNIP1-220ENST00000610535 OLFM4Q6UX06 510 aa19.49■□□□□ 0.71
TNIP1-220ENST00000610535 XAGE2Q96GT9 111 aa19.49■□□□□ 0.71
TNIP1-220ENST00000610535 SLIT3O75094 1523 aa19.49■□□□□ 0.71
TNIP1-220ENST00000610535 ZSCAN12O43309 604 aa19.49■□□□□ 0.71
TNIP1-220ENST00000610535 ADKP55263 362 aaKnown RBP19.49■□□□□ 0.71
TNIP1-220ENST00000610535 NEK11Q8NG66 645 aa19.49■□□□□ 0.71
TNIP1-220ENST00000610535 DCAF5Q96JK2 942 aa19.49■□□□□ 0.71
TNIP1-220ENST00000610535 MAP3K14Q99558 947 aa19.49■□□□□ 0.71
TNIP1-220ENST00000610535 SCN11AQ9UI33 1791 aa19.48■□□□□ 0.71
TNIP1-220ENST00000610535 TOGARAM2Q6ZUX3 1019 aa19.48■□□□□ 0.71
TNIP1-220ENST00000610535 TICAM2Q86XR7 235 aa19.48■□□□□ 0.71
TNIP1-220ENST00000610535 ARHGAP6O43182 974 aa19.48■□□□□ 0.71
TNIP1-220ENST00000610535 GPAA1O43292 621 aa19.48■□□□□ 0.71
TNIP1-220ENST00000610535 PPP6R2O75170 966 aa19.48■□□□□ 0.71
TNIP1-220ENST00000610535 TBC1D8O95759 1140 aa19.48■□□□□ 0.71
TNIP1-220ENST00000610535 A1BGP04217 495 aa19.48■□□□□ 0.71
TNIP1-220ENST00000610535 ST5P78524 1137 aa19.48■□□□□ 0.71
TNIP1-220ENST00000610535 TEX35Q5T0J7 233 aa19.48■□□□□ 0.71
TNIP1-220ENST00000610535 RESP18Q5W5W9 173 aa19.48■□□□□ 0.71
TNIP1-220ENST00000610535 CYB5R4Q7L1T6 521 aa19.48■□□□□ 0.71
TNIP1-220ENST00000610535 CNNM3Q8NE01 707 aa19.48■□□□□ 0.71
TNIP1-220ENST00000610535 ZBTB9Q96C00 473 aa19.48■□□□□ 0.71
TNIP1-220ENST00000610535 BAG1Q99933 345 aaPredicted RBP19.48■□□□□ 0.71
TNIP1-220ENST00000610535 NBPF3Q9H094 633 aa19.48■□□□□ 0.71
TNIP1-220ENST00000610535 MEGF6O75095 1541 aa19.48■□□□□ 0.71
TNIP1-220ENST00000610535 CDK11BP21127 795 aaKnown RBP19.47■□□□□ 0.71
TNIP1-220ENST00000610535 CASQ1P31415 396 aa19.47■□□□□ 0.71
TNIP1-220ENST00000610535 CCDC102BQ68D86 513 aa19.47■□□□□ 0.71
TNIP1-220ENST00000610535 CCDC34Q96HJ3 373 aa19.47■□□□□ 0.71
TNIP1-220ENST00000610535 KCNH3Q9ULD8 1083 aa19.47■□□□□ 0.71
TNIP1-220ENST00000610535 METAP2P50579 478 aaKnown RBP eCLIP19.47■□□□□ 0.712e-9■■□□□ 11.5
TNIP1-220ENST00000610535 KRBA2Q6ZNG9 492 aa19.47■□□□□ 0.71
TNIP1-220ENST00000610535 CREBRFQ8IUR6 639 aa19.47■□□□□ 0.71
TNIP1-220ENST00000610535 APPBP2Q92624 585 aa19.47■□□□□ 0.71
TNIP1-220ENST00000610535 MAP3K9P80192 1104 aa19.46■□□□□ 0.71
TNIP1-220ENST00000610535 CC2D1AQ6P1N0 951 aaPredicted RBP19.46■□□□□ 0.71
TNIP1-220ENST00000610535 JMYQ8N9B5 988 aa19.46■□□□□ 0.71
TNIP1-220ENST00000610535 MICU3Q86XE3 530 aa19.46■□□□□ 0.71
TNIP1-220ENST00000610535 MPHOSPH8Q99549 860 aa19.46■□□□□ 0.71
TNIP1-220ENST00000610535 DESI2Q9BSY9 194 aa19.46■□□□□ 0.71
TNIP1-220ENST00000610535 MYL10Q9BUA6 226 aa19.46■□□□□ 0.71
TNIP1-220ENST00000610535 CAMTA1Q9Y6Y1 1673 aa19.46■□□□□ 0.71
TNIP1-220ENST00000610535 CIAO1O76071 339 aa19.45■□□□□ 0.7
TNIP1-220ENST00000610535 ZFYP08048 801 aaPredicted RBP19.45■□□□□ 0.7
TNIP1-220ENST00000610535 TBX2Q13207 712 aaPredicted RBP19.45■□□□□ 0.7
TNIP1-220ENST00000610535 FCHSD1Q86WN1 690 aa19.45■□□□□ 0.7
TNIP1-220ENST00000610535 TBC1D10CQ8IV04 446 aa19.45■□□□□ 0.7
TNIP1-220ENST00000610535 TC2NQ8N9U0 490 aa19.45■□□□□ 0.7
TNIP1-220ENST00000610535 ANGEL1Q9UNK9 670 aaKnown RBP19.45■□□□□ 0.7
TNIP1-220ENST00000610535 ZMYM6O95789 1325 aa19.45■□□□□ 0.7
TNIP1-220ENST00000610535 PPP2R3AQ06190 1150 aa19.45■□□□□ 0.7
TNIP1-220ENST00000610535 FMR1Q06787 632 aaKnown RBP eCLIP19.45■□□□□ 0.7
TNIP1-220ENST00000610535 ZNF827Q17R98 1081 aa19.45■□□□□ 0.7
TNIP1-220ENST00000610535 TRMT44Q8IYL2 757 aaKnown RBP19.45■□□□□ 0.7
TNIP1-220ENST00000610535 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.45■□□□□ 0.7
TNIP1-220ENST00000610535 OAS2P29728 719 aaKnown RBP19.45■□□□□ 0.7
TNIP1-220ENST00000610535 TRDNQ13061 729 aa19.45■□□□□ 0.7
TNIP1-220ENST00000610535 SMARCE1Q969G3 411 aa19.45■□□□□ 0.7
TNIP1-220ENST00000610535 PARD6BQ9BYG5 372 aa19.45■□□□□ 0.7
TNIP1-220ENST00000610535 IRX2Q9BZI1 471 aaPredicted RBP19.45■□□□□ 0.7
TNIP1-220ENST00000610535 UBXN6Q9BZV1 441 aa19.45■□□□□ 0.7
TNIP1-220ENST00000610535 INCENPQ9NQS7 918 aa19.45■□□□□ 0.7
TNIP1-220ENST00000610535 FAM237AA0A1B0GTK4 181 aa19.44■□□□□ 0.7
TNIP1-220ENST00000610535 TPM1P09493 284 aa19.44■□□□□ 0.7
TNIP1-220ENST00000610535 CAPN2P17655 700 aa19.44■□□□□ 0.7
TNIP1-220ENST00000610535 GRIN1Q05586 938 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms