RNA–Protein interactions for RNA: ENST00000607632.1

PRDM16-210, Transcript of PR/SET domain 16, humanhuman

TSL 2

Gene PRDM16, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-210ENST00000607632 KIF1BPQ96EK5 621 aa17.6■□□□□ 0.41
PRDM16-210ENST00000607632 YTHDC1Q96MU7 727 aaKnown RBP17.6■□□□□ 0.41
PRDM16-210ENST00000607632 TLR7Q9NYK1 1049 aaKnown RBP17.6■□□□□ 0.41
PRDM16-210ENST00000607632 PPP1R12BO60237 982 aaPredicted RBP17.59■□□□□ 0.41
PRDM16-210ENST00000607632 RAB11FIP3O75154 756 aa17.59■□□□□ 0.41
PRDM16-210ENST00000607632 USP2O75604 605 aaPredicted RBP17.59■□□□□ 0.41
PRDM16-210ENST00000607632 GRM1Q13255 1194 aa17.59■□□□□ 0.41
PRDM16-210ENST00000607632 ERICH6Q7L0X2 663 aa17.59■□□□□ 0.41
PRDM16-210ENST00000607632 SLF2Q8IX21 1173 aa17.59■□□□□ 0.41
PRDM16-210ENST00000607632 NSUN4Q96CB9 384 aaKnown RBP17.59■□□□□ 0.41
PRDM16-210ENST00000607632 TMEM39BQ9GZU3 492 aa17.59■□□□□ 0.41
PRDM16-210ENST00000607632 TMOD2Q9NZR1 351 aa17.59■□□□□ 0.41
PRDM16-210ENST00000607632 ABCF2Q9UG63 623 aa17.59■□□□□ 0.41
PRDM16-210ENST00000607632 ANGEL1Q9UNK9 670 aaKnown RBP17.59■□□□□ 0.41
PRDM16-210ENST00000607632 MYO5AQ9Y4I1 1855 aaKnown RBP17.58■□□□□ 0.41
PRDM16-210ENST00000607632 DOCK2Q92608 1830 aa17.58■□□□□ 0.41
PRDM16-210ENST00000607632 MROH7-TTC4A0A0A0MT08 1334 aa17.58■□□□□ 0.4
PRDM16-210ENST00000607632 CTCFP49711 727 aaPredicted RBP17.58■□□□□ 0.4
PRDM16-210ENST00000607632 CACNB3P54284 484 aa17.58■□□□□ 0.4
PRDM16-210ENST00000607632 MECOMQ03112 1051 aa17.58■□□□□ 0.4
PRDM16-210ENST00000607632 TTC39AQ5SRH9 613 aa17.58■□□□□ 0.4
PRDM16-210ENST00000607632 DZIP1Q86YF9 867 aaKnown RBP17.58■□□□□ 0.4
PRDM16-210ENST00000607632 REM2Q8IYK8 340 aaPredicted RBP17.58■□□□□ 0.4
PRDM16-210ENST00000607632 AIDAQ96BJ3 306 aa17.58■□□□□ 0.4
PRDM16-210ENST00000607632 IDI2Q9BXS1 227 aa17.58■□□□□ 0.4
PRDM16-210ENST00000607632 CCDC8Q9H0W5 538 aaPredicted RBP17.58■□□□□ 0.4
PRDM16-210ENST00000607632 PRDM10Q9NQV6 1147 aa17.58■□□□□ 0.4
PRDM16-210ENST00000607632 GPR75-ASB3A0A0A6YYF3 556 aa17.57■□□□□ 0.4
PRDM16-210ENST00000607632 CA12O43570 354 aa17.57■□□□□ 0.4
PRDM16-210ENST00000607632 CYP2E1P05181 493 aaPredicted RBP17.57■□□□□ 0.4
PRDM16-210ENST00000607632 HSPA8P11142 646 aaKnown RBP17.57■□□□□ 0.4
PRDM16-210ENST00000607632 KIF23Q02241 960 aaPredicted RBP17.57■□□□□ 0.4
PRDM16-210ENST00000607632 TTLL12Q14166 644 aaPredicted RBP17.57■□□□□ 0.4
PRDM16-210ENST00000607632 TBC1D9Q6ZT07 1266 aa17.57■□□□□ 0.4
PRDM16-210ENST00000607632 FAM151AQ8WW52 585 aa17.57■□□□□ 0.4
PRDM16-210ENST00000607632 FAM198AQ9UFP1 575 aa17.57■□□□□ 0.4
PRDM16-210ENST00000607632 FZD1Q9UP38 647 aa17.57■□□□□ 0.4
PRDM16-210ENST00000607632 MAP4K4O95819 1239 aaPredicted RBP17.56■□□□□ 0.4
PRDM16-210ENST00000607632 RHBDL3P58872 404 aa17.56■□□□□ 0.4
PRDM16-210ENST00000607632 NFIAQ12857 509 aa17.56■□□□□ 0.4
PRDM16-210ENST00000607632 PRKG1Q13976 671 aa17.56■□□□□ 0.4
PRDM16-210ENST00000607632 NPM3O75607 178 aaKnown RBP17.55■□□□□ 0.4
PRDM16-210ENST00000607632 ZAP70P43403 619 aa17.55■□□□□ 0.4
PRDM16-210ENST00000607632 IREB2P48200 963 aaKnown RBP17.55■□□□□ 0.4
PRDM16-210ENST00000607632 GSTO1P78417 241 aa17.55■□□□□ 0.4
PRDM16-210ENST00000607632 AACSQ86V21 672 aa17.55■□□□□ 0.4
PRDM16-210ENST00000607632 ANKRD13AQ8IZ07 590 aa17.55■□□□□ 0.4
PRDM16-210ENST00000607632 CLASRPQ8N2M8 674 aaKnown RBP17.55■□□□□ 0.4
PRDM16-210ENST00000607632 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.55■□□□□ 0.4
PRDM16-210ENST00000607632 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.55■□□□□ 0.4
PRDM16-210ENST00000607632 CSRNP1Q96S65 589 aa17.55■□□□□ 0.4
PRDM16-210ENST00000607632 IL1RAPL2Q9NP60 686 aa17.55■□□□□ 0.4
PRDM16-210ENST00000607632 USP40Q9NVE5 1235 aa17.55■□□□□ 0.4
PRDM16-210ENST00000607632 SAGE1Q9NXZ1 904 aa17.55■□□□□ 0.4
PRDM16-210ENST00000607632 ATRNL1Q5VV63 1379 aa17.54■□□□□ 0.4
PRDM16-210ENST00000607632 ENTPD3O75355 529 aa17.54■□□□□ 0.4
PRDM16-210ENST00000607632 WDHD1O75717 1129 aaPredicted RBP17.54■□□□□ 0.4
PRDM16-210ENST00000607632 LDHCP07864 332 aa17.54■□□□□ 0.4
PRDM16-210ENST00000607632 BTDP43251 543 aa17.54■□□□□ 0.4
PRDM16-210ENST00000607632 SPRYD7Q5W111 196 aa17.54■□□□□ 0.4
PRDM16-210ENST00000607632 HOOK2Q96ED9 719 aa17.54■□□□□ 0.4
PRDM16-210ENST00000607632 SNRKQ9NRH2 765 aa17.54■□□□□ 0.4
PRDM16-210ENST00000607632 COL2A1P02458 1487 aaPredicted RBP17.53■□□□□ 0.4
PRDM16-210ENST00000607632 ZBTB48P10074 688 aaPredicted RBP17.53■□□□□ 0.4
PRDM16-210ENST00000607632 TM4SF4P48230 202 aa17.53■□□□□ 0.4
PRDM16-210ENST00000607632 TMED8Q6PL24 325 aaPredicted RBP17.53■□□□□ 0.4
PRDM16-210ENST00000607632 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.53■□□□□ 0.4
PRDM16-210ENST00000607632 CLMNQ96JQ2 1002 aa17.53■□□□□ 0.4
PRDM16-210ENST00000607632 BEGAINQ9BUH8 593 aa17.53■□□□□ 0.4
PRDM16-210ENST00000607632 DCTPP1Q9H773 170 aa17.53■□□□□ 0.4
PRDM16-210ENST00000607632 LRP2BPQ9P2M1 347 aa17.53■□□□□ 0.4
PRDM16-210ENST00000607632 FOCADQ5VW36 1801 aa17.53■□□□□ 0.4
PRDM16-210ENST00000607632 LBX1P52954 281 aa17.52■□□□□ 0.4
PRDM16-210ENST00000607632 WNK4Q96J92 1243 aa17.52■□□□□ 0.4
PRDM16-210ENST00000607632 PIH1D3Q9NQM4 214 aaKnown RBP17.52■□□□□ 0.4
PRDM16-210ENST00000607632 RAI14Q9P0K7 980 aa17.52■□□□□ 0.4
PRDM16-210ENST00000607632 PCDHB15Q9Y5E8 787 aa17.52■□□□□ 0.4
PRDM16-210ENST00000607632 CDK5RAP2Q96SN8 1893 aa17.52■□□□□ 0.39
PRDM16-210ENST00000607632 RGS3P49796 1198 aa17.51■□□□□ 0.39
PRDM16-210ENST00000607632 PPP4CP60510 307 aa17.51■□□□□ 0.39
PRDM16-210ENST00000607632 MAP3K10Q02779 954 aa17.51■□□□□ 0.39
PRDM16-210ENST00000607632 ZFPM1Q8IX07 1006 aa17.51■□□□□ 0.39
PRDM16-210ENST00000607632 SLC10A4Q96EP9 437 aa17.51■□□□□ 0.39
PRDM16-210ENST00000607632 DDX4Q9NQI0 724 aaKnown RBP17.51■□□□□ 0.39
PRDM16-210ENST00000607632 ZNF112Q9UJU3 913 aa17.51■□□□□ 0.39
PRDM16-210ENST00000607632 GJA5P36382 358 aa17.5■□□□□ 0.39
PRDM16-210ENST00000607632 MAP3K9P80192 1104 aa17.5■□□□□ 0.39
PRDM16-210ENST00000607632 TCP10Q12799 353 aa17.5■□□□□ 0.39
PRDM16-210ENST00000607632 DCAF15Q66K64 600 aa17.5■□□□□ 0.39
PRDM16-210ENST00000607632 NAA16Q6N069 864 aaPredicted RBP17.5■□□□□ 0.39
PRDM16-210ENST00000607632 SH3BP5LQ7L8J4 393 aa17.5■□□□□ 0.39
PRDM16-210ENST00000607632 CFHR5Q9BXR6 569 aa17.5■□□□□ 0.39
PRDM16-210ENST00000607632 LRRCC1Q9C099 1032 aa17.5■□□□□ 0.39
PRDM16-210ENST00000607632 RNF186Q9NXI6 227 aa17.5■□□□□ 0.39
PRDM16-210ENST00000607632 IFIT2P09913 472 aaKnown RBP17.49■□□□□ 0.39
PRDM16-210ENST00000607632 VGLL4Q14135 290 aa17.49■□□□□ 0.39
PRDM16-210ENST00000607632 ADGRA1Q86SQ6 560 aa17.49■□□□□ 0.39
PRDM16-210ENST00000607632 CRBNQ96SW2 442 aa17.49■□□□□ 0.39
PRDM16-210ENST00000607632 ANTXR1Q9H6X2 564 aa17.49■□□□□ 0.39
PRDM16-210ENST00000607632 AK9Q5TCS8 1911 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms