RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 MBD4O95243 580 aa9.26□□□□□ -0.93
MSH6-211ENST00000606499 LDHCP07864 332 aa9.26□□□□□ -0.93
MSH6-211ENST00000606499 HDLBPQ00341 1268 aaKnown RBP9.26□□□□□ -0.93
MSH6-211ENST00000606499 DLGAP5Q15398 846 aa9.26□□□□□ -0.93
MSH6-211ENST00000606499 KIF4BQ2VIQ3 1234 aa9.26□□□□□ -0.93
MSH6-211ENST00000606499 LRRFIP1Q32MZ4 808 aaKnown RBP9.26□□□□□ -0.93
MSH6-211ENST00000606499 NBPF9Q3BBW0 867 aa9.26□□□□□ -0.93
MSH6-211ENST00000606499 APOBEC3HQ6NTF7 200 aaKnown RBP9.26□□□□□ -0.93
MSH6-211ENST00000606499 HHIPL2Q6UWX4 724 aa9.26□□□□□ -0.93
MSH6-211ENST00000606499 CWC27Q6UX04 472 aaKnown RBP9.26□□□□□ -0.93
MSH6-211ENST00000606499 CCDC129Q6ZRS4 1044 aa9.26□□□□□ -0.93
MSH6-211ENST00000606499 SLF2Q8IX21 1173 aa9.26□□□□□ -0.93
MSH6-211ENST00000606499 LCORLQ8N3X6 602 aa9.26□□□□□ -0.93
MSH6-211ENST00000606499 SH3RF3Q8TEJ3 882 aaPredicted RBP9.26□□□□□ -0.93
MSH6-211ENST00000606499 FAM163AQ96GL9 167 aaPredicted RBP9.26□□□□□ -0.93
MSH6-211ENST00000606499 PRMT6Q96LA8 375 aaPredicted RBP9.26□□□□□ -0.93
MSH6-211ENST00000606499 RIOK1Q9BRS2 568 aaKnown RBP9.26□□□□□ -0.93
MSH6-211ENST00000606499 ARMT1Q9H993 441 aa9.26□□□□□ -0.93
MSH6-211ENST00000606499 NMRK2Q9NPI5 230 aa9.26□□□□□ -0.93
MSH6-211ENST00000606499 ADARB2Q9NS39 739 aaKnown RBP9.26□□□□□ -0.93
MSH6-211ENST00000606499 HACL1Q9UJ83 578 aa9.26□□□□□ -0.93
MSH6-211ENST00000606499 BAZ2AQ9UIF9 1905 aaKnown RBP9.26□□□□□ -0.93
MSH6-211ENST00000606499 MYH1P12882 1939 aa9.25□□□□□ -0.93
MSH6-211ENST00000606499 GPR75-ASB3A0A0A6YYF3 556 aa9.25□□□□□ -0.93
MSH6-211ENST00000606499 CLRN2A0PK11 232 aa9.25□□□□□ -0.93
MSH6-211ENST00000606499 IQCA1LA6NCM1 817 aa9.25□□□□□ -0.93
MSH6-211ENST00000606499 HIP1O00291 1037 aa9.25□□□□□ -0.93
MSH6-211ENST00000606499 WNT10BO00744 389 aa9.25□□□□□ -0.93
MSH6-211ENST00000606499 IGSF3O75054 1194 aa9.25□□□□□ -0.93
MSH6-211ENST00000606499 EPHX2P34913 555 aa9.25□□□□□ -0.93
MSH6-211ENST00000606499 HIRAP54198 1017 aaPredicted RBP9.25□□□□□ -0.93
MSH6-211ENST00000606499 CACNB3P54284 484 aa9.25□□□□□ -0.93
MSH6-211ENST00000606499 RHBDL3P58872 404 aa9.25□□□□□ -0.93
MSH6-211ENST00000606499 CDC42EP5Q6NZY7 148 aa9.25□□□□□ -0.93
MSH6-211ENST00000606499 TMED8Q6PL24 325 aaPredicted RBP9.25□□□□□ -0.93
MSH6-211ENST00000606499 ZNF589Q86UQ0 364 aaPredicted RBP9.25□□□□□ -0.93
MSH6-211ENST00000606499 MTMR14Q8NCE2 650 aa9.25□□□□□ -0.93
MSH6-211ENST00000606499 AIDAQ96BJ3 306 aa9.25□□□□□ -0.93
MSH6-211ENST00000606499 ZBED3Q96IU2 234 aaPredicted RBP9.25□□□□□ -0.93
MSH6-211ENST00000606499 NOL10Q9BSC4 688 aaKnown RBP9.25□□□□□ -0.93
MSH6-211ENST00000606499 MRIQ9BWK5 157 aa9.25□□□□□ -0.93
MSH6-211ENST00000606499 TAF1DQ9H5J8 278 aaPredicted RBP9.25□□□□□ -0.93
MSH6-211ENST00000606499 TDRD3Q9H7E2 651 aaKnown RBP9.25□□□□□ -0.93
MSH6-211ENST00000606499 RRAGCQ9HB90 399 aa9.25□□□□□ -0.93
MSH6-211ENST00000606499 SIPA1L1O43166 1804 aa9.25□□□□□ -0.93
MSH6-211ENST00000606499 GPAA1O43292 621 aa9.24□□□□□ -0.93
MSH6-211ENST00000606499 POTEIP0CG38 1075 aa9.24□□□□□ -0.93
MSH6-211ENST00000606499 POTEJP0CG39 1038 aa9.24□□□□□ -0.93
MSH6-211ENST00000606499 MMP14P50281 582 aa9.24□□□□□ -0.93
MSH6-211ENST00000606499 MCMDC2Q4G0Z9 681 aa9.24□□□□□ -0.93
MSH6-211ENST00000606499 TICAM2Q86XR7 235 aa9.24□□□□□ -0.93
MSH6-211ENST00000606499 TEX11Q8IYF3 940 aa9.24□□□□□ -0.93
MSH6-211ENST00000606499 ESYT1Q9BSJ8 1104 aa9.24□□□□□ -0.93
MSH6-211ENST00000606499 HELLSQ9NRZ9 838 aa9.24□□□□□ -0.93
MSH6-211ENST00000606499 USP40Q9NVE5 1235 aa9.24□□□□□ -0.93
MSH6-211ENST00000606499 GGA3Q9NZ52 723 aa9.24□□□□□ -0.93
MSH6-211ENST00000606499 SCAF8Q9UPN6 1271 aaKnown RBP9.24□□□□□ -0.93
MSH6-211ENST00000606499 CCDC171Q6TFL3 1326 aa9.24□□□□□ -0.93
MSH6-211ENST00000606499 FOXP2O15409 715 aa9.23□□□□□ -0.93
MSH6-211ENST00000606499 SGSM2O43147 1006 aa9.23□□□□□ -0.93
MSH6-211ENST00000606499 PRKAB2O43741 272 aa9.23□□□□□ -0.93
MSH6-211ENST00000606499 BAG3O95817 575 aa9.23□□□□□ -0.93
MSH6-211ENST00000606499 VEGFAP15692 232 aaPredicted RBP9.23□□□□□ -0.93
MSH6-211ENST00000606499 PPP4CP60510 307 aa9.23□□□□□ -0.93
MSH6-211ENST00000606499 NFIAQ12857 509 aa9.23□□□□□ -0.93
MSH6-211ENST00000606499 PICALMQ13492 652 aa9.23□□□□□ -0.93
MSH6-211ENST00000606499 SPDYE2Q495Y8 402 aa9.23□□□□□ -0.93
MSH6-211ENST00000606499 EAPPQ56P03 285 aaPredicted RBP9.23□□□□□ -0.93
MSH6-211ENST00000606499 VPS53Q5VIR6 699 aa9.23□□□□□ -0.93
MSH6-211ENST00000606499 ANGEL2Q5VTE6 544 aaKnown RBP9.23□□□□□ -0.93
MSH6-211ENST00000606499 CASC1Q6TDU7 716 aa9.23□□□□□ -0.93
MSH6-211ENST00000606499 USP50Q70EL3 339 aaPredicted RBP9.23□□□□□ -0.93
MSH6-211ENST00000606499 SDR42E1Q8WUS8 393 aa9.23□□□□□ -0.93
MSH6-211ENST00000606499 STRBPQ96SI9 672 aaKnown RBP9.23□□□□□ -0.93
MSH6-211ENST00000606499 VEZTQ9HBM0 779 aa9.23□□□□□ -0.93
MSH6-211ENST00000606499 DDX4Q9NQI0 724 aaKnown RBP9.23□□□□□ -0.93
MSH6-211ENST00000606499 ZNF70Q9UC06 446 aaPredicted RBP9.23□□□□□ -0.93
MSH6-211ENST00000606499 RAD50Q92878 1312 aa9.23□□□□□ -0.93
MSH6-211ENST00000606499 CNTNAP1P78357 1384 aa9.23□□□□□ -0.93
MSH6-211ENST00000606499 POLR2AP24928 1970 aaKnown RBP9.23□□□□□ -0.93
MSH6-211ENST00000606499 TCP10L2B9ZVM9 353 aa9.22□□□□□ -0.93
MSH6-211ENST00000606499 MYO1BO43795 1136 aa9.22□□□□□ -0.93
MSH6-211ENST00000606499 WDHD1O75717 1129 aaPredicted RBP9.22□□□□□ -0.93
MSH6-211ENST00000606499 PLCG2P16885 1265 aa9.22□□□□□ -0.93
MSH6-211ENST00000606499 YY1P25490 414 aa9.22□□□□□ -0.93
MSH6-211ENST00000606499 C8orf34Q49A92 452 aa9.22□□□□□ -0.93
MSH6-211ENST00000606499 MAPKAPK5Q8IW41 473 aa9.22□□□□□ -0.93
MSH6-211ENST00000606499 TGFBRAP1Q8WUH2 860 aa9.22□□□□□ -0.93
MSH6-211ENST00000606499 RUFY2Q8WXA3 655 aa9.22□□□□□ -0.93
MSH6-211ENST00000606499 CRNKL1Q9BZJ0 848 aaKnown RBP9.22□□□□□ -0.93
MSH6-211ENST00000606499 GPBP1L1Q9HC44 474 aaPredicted RBP9.22□□□□□ -0.93
MSH6-211ENST00000606499 EPB41L4AQ9HCS5 686 aaPredicted RBP9.22□□□□□ -0.93
MSH6-211ENST00000606499 FAM198AQ9UFP1 575 aa9.22□□□□□ -0.93
MSH6-211ENST00000606499 SLC4A4Q9Y6R1 1079 aa9.22□□□□□ -0.93
MSH6-211ENST00000606499 FLT1P17948 1338 aa9.22□□□□□ -0.93
MSH6-211ENST00000606499 MYH8P13535 1937 aa9.21□□□□□ -0.93
MSH6-211ENST00000606499 GSG1L2A8MUP6 293 aa9.21□□□□□ -0.94
MSH6-211ENST00000606499 USP5P45974 858 aa9.21□□□□□ -0.94
MSH6-211ENST00000606499 MFAP1P55081 439 aaKnown RBP9.21□□□□□ -0.94
MSH6-211ENST00000606499 TCP10Q12799 353 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms