RNA–Protein interactions for RNA: ENST00000598607.1

GTF2F1-206, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 4

Gene GTF2F1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-206ENST00000598607 ZNF70Q9UC06 446 aaPredicted RBP18.3■□□□□ 0.52
GTF2F1-206ENST00000598607 GPR75-ASB3A0A0A6YYF3 556 aa18.29■□□□□ 0.52
GTF2F1-206ENST00000598607 CLRN2A0PK11 232 aa18.29■□□□□ 0.52
GTF2F1-206ENST00000598607 BAG3O95817 575 aa18.29■□□□□ 0.52
GTF2F1-206ENST00000598607 MAP4K4O95819 1239 aaPredicted RBP18.29■□□□□ 0.52
GTF2F1-206ENST00000598607 TNNI2P48788 182 aa18.29■□□□□ 0.52
GTF2F1-206ENST00000598607 LRRFIP1Q32MZ4 808 aaKnown RBP18.29■□□□□ 0.52
GTF2F1-206ENST00000598607 MAGEB6Q8N7X4 407 aa18.29■□□□□ 0.52
GTF2F1-206ENST00000598607 ZNF384Q8TF68 577 aa18.29■□□□□ 0.52
GTF2F1-206ENST00000598607 EDC3Q96F86 508 aaKnown RBP18.29■□□□□ 0.52
GTF2F1-206ENST00000598607 VEZTQ9HBM0 779 aa18.29■□□□□ 0.52
GTF2F1-206ENST00000598607 MYH1P12882 1939 aa18.28■□□□□ 0.52
GTF2F1-206ENST00000598607 ITGBL1O95965 494 aaPredicted RBP18.28■□□□□ 0.52
GTF2F1-206ENST00000598607 CYP7A1P22680 504 aa18.28■□□□□ 0.52
GTF2F1-206ENST00000598607 BTDP43251 543 aa18.28■□□□□ 0.52
GTF2F1-206ENST00000598607 SLC9C2Q5TAH2 1124 aa18.28■□□□□ 0.52
GTF2F1-206ENST00000598607 CERS3Q8IU89 383 aa18.28■□□□□ 0.52
GTF2F1-206ENST00000598607 KBTBD3Q8NAB2 608 aa18.28■□□□□ 0.52
GTF2F1-206ENST00000598607 GLIS2Q9BZE0 524 aaPredicted RBP18.28■□□□□ 0.52
GTF2F1-206ENST00000598607 PPP2R3BQ9Y5P8 575 aa18.28■□□□□ 0.52
GTF2F1-206ENST00000598607 PLCG2P16885 1265 aa18.27■□□□□ 0.52
GTF2F1-206ENST00000598607 C1QTNF8P60827 252 aa18.27■□□□□ 0.52
GTF2F1-206ENST00000598607 FKBP1CQ5VVH2 108 aa18.27■□□□□ 0.52
GTF2F1-206ENST00000598607 CDC42EP5Q6NZY7 148 aa18.27■□□□□ 0.52
GTF2F1-206ENST00000598607 USP48Q86UV5 1035 aa18.27■□□□□ 0.52
GTF2F1-206ENST00000598607 USP40Q9NVE5 1235 aa18.27■□□□□ 0.52
GTF2F1-206ENST00000598607 PASKQ96RG2 1323 aa18.26■□□□□ 0.51
GTF2F1-206ENST00000598607 PDE6AP16499 860 aa18.26■□□□□ 0.51
GTF2F1-206ENST00000598607 PDE4AP27815 886 aa18.26■□□□□ 0.51
GTF2F1-206ENST00000598607 EVI5LQ96CN4 794 aa18.26■□□□□ 0.51
GTF2F1-206ENST00000598607 NAV1Q8NEY1 1877 aa18.25■□□□□ 0.51
GTF2F1-206ENST00000598607 ADM5C9JUS6 153 aa18.25■□□□□ 0.51
GTF2F1-206ENST00000598607 ZFYP08048 801 aaPredicted RBP18.25■□□□□ 0.51
GTF2F1-206ENST00000598607 ADD2P35612 726 aa18.25■□□□□ 0.51
GTF2F1-206ENST00000598607 PPP4CP60510 307 aa18.25■□□□□ 0.51
GTF2F1-206ENST00000598607 UBE3CQ15386 1083 aa18.25■□□□□ 0.51
GTF2F1-206ENST00000598607 FAM83AQ86UY5 434 aa18.25■□□□□ 0.51
GTF2F1-206ENST00000598607 FSD1Q9BTV5 496 aa18.25■□□□□ 0.51
GTF2F1-206ENST00000598607 AATFQ9NY61 560 aaKnown RBP eCLIP18.25■□□□□ 0.51
GTF2F1-206ENST00000598607 ZNF532Q9HCE3 1301 aa18.24■□□□□ 0.51
GTF2F1-206ENST00000598607 TCP10L2B9ZVM9 353 aa18.24■□□□□ 0.51
GTF2F1-206ENST00000598607 ADGRA1Q86SQ6 560 aa18.24■□□□□ 0.51
GTF2F1-206ENST00000598607 TICAM2Q86XR7 235 aa18.24■□□□□ 0.51
GTF2F1-206ENST00000598607 DEFB129Q9H1M3 183 aa18.24■□□□□ 0.51
GTF2F1-206ENST00000598607 RPAP1Q9BWH6 1393 aaPredicted RBP18.23■□□□□ 0.51
GTF2F1-206ENST00000598607 TCRBV5S4A2TA0A5A2 114 aa18.23■□□□□ 0.51
GTF2F1-206ENST00000598607 TRIM6-TRIM34B2RNG4 842 aa18.23■□□□□ 0.51
GTF2F1-206ENST00000598607 TRAF5O00463 557 aa18.23■□□□□ 0.51
GTF2F1-206ENST00000598607 NF2P35240 595 aa18.23■□□□□ 0.51
GTF2F1-206ENST00000598607 RHBDL3P58872 404 aa18.23■□□□□ 0.51
GTF2F1-206ENST00000598607 RASA3Q14644 834 aa18.23■□□□□ 0.51
GTF2F1-206ENST00000598607 CDCA5Q96FF9 252 aa18.23■□□□□ 0.51
GTF2F1-206ENST00000598607 IDI2Q9BXS1 227 aa18.23■□□□□ 0.51
GTF2F1-206ENST00000598607 PAPPA2Q9BXP8 1791 aa18.22■□□□□ 0.51
GTF2F1-206ENST00000598607 RFX7Q2KHR2 1363 aa18.22■□□□□ 0.51
GTF2F1-206ENST00000598607 MAGEB6P1A0A0J9YX57 407 aa18.22■□□□□ 0.51
GTF2F1-206ENST00000598607 RNF113AO15541 343 aaKnown RBP18.22■□□□□ 0.51
GTF2F1-206ENST00000598607 ENTPD3O75355 529 aa18.22■□□□□ 0.51
GTF2F1-206ENST00000598607 NPM3O75607 178 aaKnown RBP18.22■□□□□ 0.51
GTF2F1-206ENST00000598607 CACNB3P54284 484 aa18.22■□□□□ 0.51
GTF2F1-206ENST00000598607 TTC22Q5TAA0 569 aa18.22■□□□□ 0.51
GTF2F1-206ENST00000598607 TEX11Q8IYF3 940 aa18.22■□□□□ 0.51
GTF2F1-206ENST00000598607 SCAF8Q9UPN6 1271 aaKnown RBP18.22■□□□□ 0.51
GTF2F1-206ENST00000598607 BAZ2AQ9UIF9 1905 aaKnown RBP18.21■□□□□ 0.51
GTF2F1-206ENST00000598607 APLP1P51693 650 aa18.21■□□□□ 0.51
GTF2F1-206ENST00000598607 MIGA1Q8NAN2 632 aa18.21■□□□□ 0.51
GTF2F1-206ENST00000598607 SH3RF3Q8TEJ3 882 aaPredicted RBP18.21■□□□□ 0.51
GTF2F1-206ENST00000598607 FAM151AQ8WW52 585 aa18.21■□□□□ 0.51
GTF2F1-206ENST00000598607 RILPL2Q969X0 211 aa18.21■□□□□ 0.51
GTF2F1-206ENST00000598607 CNTNAP1P78357 1384 aa18.2■□□□□ 0.5
GTF2F1-206ENST00000598607 MYH8P13535 1937 aa18.2■□□□□ 0.5
GTF2F1-206ENST00000598607 WDHD1O75717 1129 aaPredicted RBP18.2■□□□□ 0.5
GTF2F1-206ENST00000598607 CELF2O95319 508 aaKnown RBP18.2■□□□□ 0.5
GTF2F1-206ENST00000598607 RGS3P49796 1198 aa18.2■□□□□ 0.5
GTF2F1-206ENST00000598607 DYNLL1P63167 89 aaKnown RBP18.2■□□□□ 0.5
GTF2F1-206ENST00000598607 SUPT20HL1Q3ZLR7 823 aa18.2■□□□□ 0.5
GTF2F1-206ENST00000598607 APPBP2Q92624 585 aa18.2■□□□□ 0.5
GTF2F1-206ENST00000598607 HOOK2Q96ED9 719 aa18.2■□□□□ 0.5
GTF2F1-206ENST00000598607 ZNF408Q9H9D4 720 aa18.2■□□□□ 0.5
GTF2F1-206ENST00000598607 COL2A1P02458 1487 aaPredicted RBP18.2■□□□□ 0.5
GTF2F1-206ENST00000598607 TMEM88BA6NKF7 163 aa18.19■□□□□ 0.5
GTF2F1-206ENST00000598607 FMR1Q06787 632 aaKnown RBP eCLIP18.19■□□□□ 0.5
GTF2F1-206ENST00000598607 TCP10Q12799 353 aa18.19■□□□□ 0.5
GTF2F1-206ENST00000598607 NFIAQ12857 509 aa18.19■□□□□ 0.5
GTF2F1-206ENST00000598607 AIDAQ96BJ3 306 aa18.19■□□□□ 0.5
GTF2F1-206ENST00000598607 RIOK1Q9BRS2 568 aaKnown RBP18.19■□□□□ 0.5
GTF2F1-206ENST00000598607 CRNKL1Q9BZJ0 848 aaKnown RBP18.19■□□□□ 0.5
GTF2F1-206ENST00000598607 FAM198AQ9UFP1 575 aa18.19■□□□□ 0.5
GTF2F1-206ENST00000598607 DDX60LQ5H9U9 1706 aaKnown RBP18.18■□□□□ 0.5
GTF2F1-206ENST00000598607 HSPA6P17066 643 aa18.18■□□□□ 0.5
GTF2F1-206ENST00000598607 FKBP1BP68106 108 aa18.18■□□□□ 0.5
GTF2F1-206ENST00000598607 PICALMQ13492 652 aa18.18■□□□□ 0.5
GTF2F1-206ENST00000598607 DLK2Q6UY11 383 aa18.18■□□□□ 0.5
GTF2F1-206ENST00000598607 C2orf69Q8N8R5 385 aa18.18■□□□□ 0.5
GTF2F1-206ENST00000598607 TMEM39BQ9GZU3 492 aa18.18■□□□□ 0.5
GTF2F1-206ENST00000598607 OTOFQ9HC10 1997 aa18.17■□□□□ 0.5
GTF2F1-206ENST00000598607 HIP1O00291 1037 aa18.17■□□□□ 0.5
GTF2F1-206ENST00000598607 MBD4O95243 580 aa18.17■□□□□ 0.5
GTF2F1-206ENST00000598607 USP5P45974 858 aa18.17■□□□□ 0.5
GTF2F1-206ENST00000598607 PRAMEF18Q5VWM3 479 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms