RNA–Protein interactions for RNA: ENST00000589538.5

DNMT1-221, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-221ENST00000589538 MAP2K1Q02750 393 aaPredicted RBP20.06■□□□□ 0.8
DNMT1-221ENST00000589538 GRM1Q13255 1194 aa20.06■□□□□ 0.8
DNMT1-221ENST00000589538 CDC42EP5Q6NZY7 148 aa20.06■□□□□ 0.8
DNMT1-221ENST00000589538 TMED8Q6PL24 325 aaPredicted RBP20.06■□□□□ 0.8
DNMT1-221ENST00000589538 USP40Q9NVE5 1235 aa20.06■□□□□ 0.8
DNMT1-221ENST00000589538 MAP3K11Q16584 847 aa20.05■□□□□ 0.8
DNMT1-221ENST00000589538 TBC1D9Q6ZT07 1266 aa20.05■□□□□ 0.8
DNMT1-221ENST00000589538 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.05■□□□□ 0.8
DNMT1-221ENST00000589538 NSUN4Q96CB9 384 aaKnown RBP20.05■□□□□ 0.8
DNMT1-221ENST00000589538 SNRKQ9NRH2 765 aa20.05■□□□□ 0.8
DNMT1-221ENST00000589538 RPAP1Q9BWH6 1393 aaPredicted RBP20.05■□□□□ 0.8
DNMT1-221ENST00000589538 MAST2Q6P0Q8 1798 aa20.04■□□□□ 0.8
DNMT1-221ENST00000589538 UBE2Q2LH0YL09 131 aa20.04■□□□□ 0.8
DNMT1-221ENST00000589538 CYP2E1P05181 493 aaPredicted RBP20.04■□□□□ 0.8
DNMT1-221ENST00000589538 ZAP70P43403 619 aa20.04■□□□□ 0.8
DNMT1-221ENST00000589538 IREB2P48200 963 aaKnown RBP20.04■□□□□ 0.8
DNMT1-221ENST00000589538 NBPF12Q5TAG4 269 aaPredicted RBP20.04■□□□□ 0.8
DNMT1-221ENST00000589538 AIDAQ96BJ3 306 aa20.04■□□□□ 0.8
DNMT1-221ENST00000589538 TEPSINQ96N21 525 aa20.04■□□□□ 0.8
DNMT1-221ENST00000589538 NOL10Q9BSC4 688 aaKnown RBP20.04■□□□□ 0.8
DNMT1-221ENST00000589538 ANGEL1Q9UNK9 670 aaKnown RBP20.04■□□□□ 0.8
DNMT1-221ENST00000589538 PCDHB15Q9Y5E8 787 aa20.04■□□□□ 0.8
DNMT1-221ENST00000589538 GPR75-ASB3A0A0A6YYF3 556 aa20.03■□□□□ 0.8
DNMT1-221ENST00000589538 SLC10A3P09131 477 aa20.03■□□□□ 0.8
DNMT1-221ENST00000589538 HSPA1AP0DMV8 641 aaKnown RBP20.03■□□□□ 0.8
DNMT1-221ENST00000589538 HSPA1BP0DMV9 641 aaKnown RBP20.03■□□□□ 0.8
DNMT1-221ENST00000589538 CACNB3P54284 484 aa20.03■□□□□ 0.8
DNMT1-221ENST00000589538 TTF1Q15361 905 aaPredicted RBP20.03■□□□□ 0.8
DNMT1-221ENST00000589538 NAA16Q6N069 864 aaPredicted RBP20.03■□□□□ 0.8
DNMT1-221ENST00000589538 MOB2Q70IA6 237 aa20.03■□□□□ 0.8
DNMT1-221ENST00000589538 REM2Q8IYK8 340 aaPredicted RBP20.03■□□□□ 0.8
DNMT1-221ENST00000589538 FAM151AQ8WW52 585 aa20.03■□□□□ 0.8
DNMT1-221ENST00000589538 TMEM39BQ9GZU3 492 aa20.03■□□□□ 0.8
DNMT1-221ENST00000589538 BTDP43251 543 aa20.02■□□□□ 0.8
DNMT1-221ENST00000589538 PRKG1Q13976 671 aa20.02■□□□□ 0.8
DNMT1-221ENST00000589538 LDLRAD1Q5T700 205 aa20.02■□□□□ 0.8
DNMT1-221ENST00000589538 BEGAINQ9BUH8 593 aa20.02■□□□□ 0.8
DNMT1-221ENST00000589538 IDI2Q9BXS1 227 aa20.02■□□□□ 0.8
DNMT1-221ENST00000589538 WBP1LQ9NX94 342 aa20.02■□□□□ 0.8
DNMT1-221ENST00000589538 SSC5DA1L4H1 1573 aa20.02■□□□□ 0.8
DNMT1-221ENST00000589538 FAM155AB1AL88 458 aaPredicted RBP20.01■□□□□ 0.79
DNMT1-221ENST00000589538 AOC2O75106 756 aa20.01■□□□□ 0.79
DNMT1-221ENST00000589538 PLCG2P16885 1265 aa20.01■□□□□ 0.79
DNMT1-221ENST00000589538 SUPT16HQ9Y5B9 1047 aaKnown RBP20.01■□□□□ 0.79
DNMT1-221ENST00000589538 ENTPD3O75355 529 aa20■□□□□ 0.79
DNMT1-221ENST00000589538 BAG3O95817 575 aa20■□□□□ 0.79
DNMT1-221ENST00000589538 MAP3K12Q12852 859 aa20■□□□□ 0.79
DNMT1-221ENST00000589538 DCAF15Q66K64 600 aa20■□□□□ 0.79
DNMT1-221ENST00000589538 RASAL3Q86YV0 1011 aa20■□□□□ 0.79
DNMT1-221ENST00000589538 ANKRD13AQ8IZ07 590 aa20■□□□□ 0.79
DNMT1-221ENST00000589538 ZNF384Q8TF68 577 aa20■□□□□ 0.79
DNMT1-221ENST00000589538 CA12O43570 354 aa19.99■□□□□ 0.79
DNMT1-221ENST00000589538 USP2O75604 605 aaPredicted RBP19.99■□□□□ 0.79
DNMT1-221ENST00000589538 NPM3O75607 178 aaKnown RBP19.99■□□□□ 0.79
DNMT1-221ENST00000589538 ATP5JP18859 108 aa19.99■□□□□ 0.79
DNMT1-221ENST00000589538 CERS3Q8IU89 383 aa19.99■□□□□ 0.79
DNMT1-221ENST00000589538 SLC10A4Q96EP9 437 aa19.99■□□□□ 0.79
DNMT1-221ENST00000589538 GPATCH3Q96I76 525 aa19.99■□□□□ 0.79
DNMT1-221ENST00000589538 BCL11AQ9H165 835 aa19.99■□□□□ 0.79
DNMT1-221ENST00000589538 PIH1D3Q9NQM4 214 aaKnown RBP19.99■□□□□ 0.79
DNMT1-221ENST00000589538 FAM198AQ9UFP1 575 aa19.99■□□□□ 0.79
DNMT1-221ENST00000589538 AK9Q5TCS8 1911 aa19.98■□□□□ 0.79
DNMT1-221ENST00000589538 DOCK2Q92608 1830 aa19.98■□□□□ 0.79
DNMT1-221ENST00000589538 IDH1O75874 414 aaKnown RBP19.98■□□□□ 0.79
DNMT1-221ENST00000589538 TCP10Q12799 353 aa19.98■□□□□ 0.79
DNMT1-221ENST00000589538 NFIAQ12857 509 aa19.98■□□□□ 0.79
DNMT1-221ENST00000589538 HDAC1Q13547 482 aaPredicted RBP19.98■□□□□ 0.79
DNMT1-221ENST00000589538 ZBTB47Q9UFB7 747 aaPredicted RBP19.98■□□□□ 0.79
DNMT1-221ENST00000589538 MYO5AQ9Y4I1 1855 aaKnown RBP19.98■□□□□ 0.79
DNMT1-221ENST00000589538 PCNTO95613 3336 aa19.97■□□□□ 0.79
DNMT1-221ENST00000589538 RFX7Q2KHR2 1363 aa19.97■□□□□ 0.79
DNMT1-221ENST00000589538 SMARCA5O60264 1052 aaPredicted RBP19.97■□□□□ 0.79
DNMT1-221ENST00000589538 RGS3P49796 1198 aa19.97■□□□□ 0.79
DNMT1-221ENST00000589538 RHBDL3P58872 404 aa19.97■□□□□ 0.79
DNMT1-221ENST00000589538 GCC1Q96CN9 775 aa19.97■□□□□ 0.79
DNMT1-221ENST00000589538 WDHD1O75717 1129 aaPredicted RBP19.96■□□□□ 0.79
DNMT1-221ENST00000589538 CTCFP49711 727 aaPredicted RBP19.96■□□□□ 0.79
DNMT1-221ENST00000589538 PPP4CP60510 307 aa19.96■□□□□ 0.79
DNMT1-221ENST00000589538 KIF23Q02241 960 aaPredicted RBP19.96■□□□□ 0.79
DNMT1-221ENST00000589538 CDAN1Q8IWY9 1227 aa19.96■□□□□ 0.79
DNMT1-221ENST00000589538 ZBTB48P10074 688 aaPredicted RBP19.95■□□□□ 0.78
DNMT1-221ENST00000589538 CYP7A1P22680 504 aa19.95■□□□□ 0.78
DNMT1-221ENST00000589538 MAP3K9P80192 1104 aa19.95■□□□□ 0.78
DNMT1-221ENST00000589538 ZSCAN29Q8IWY8 852 aaPredicted RBP19.95■□□□□ 0.78
DNMT1-221ENST00000589538 TEX11Q8IYF3 940 aa19.95■□□□□ 0.78
DNMT1-221ENST00000589538 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.95■□□□□ 0.78
DNMT1-221ENST00000589538 DNAJC2Q99543 621 aaKnown RBP19.95■□□□□ 0.78
DNMT1-221ENST00000589538 HAUS7Q99871 368 aa19.95■□□□□ 0.78
DNMT1-221ENST00000589538 ZNF341Q9BYN7 854 aa19.95■□□□□ 0.78
DNMT1-221ENST00000589538 RWDD1Q9H446 243 aaPredicted RBP19.95■□□□□ 0.78
DNMT1-221ENST00000589538 ANTXR1Q9H6X2 564 aa19.95■□□□□ 0.78
DNMT1-221ENST00000589538 ECHDC1Q9NTX5 307 aa19.95■□□□□ 0.78
DNMT1-221ENST00000589538 FZD1Q9UP38 647 aa19.95■□□□□ 0.78
DNMT1-221ENST00000589538 CSADQ9Y600 493 aa19.95■□□□□ 0.78
DNMT1-221ENST00000589538 MAGEB6Q8N7X4 407 aa19.94■□□□□ 0.78
DNMT1-221ENST00000589538 BOLA2Q9H3K6 86 aa19.94■□□□□ 0.78
DNMT1-221ENST00000589538 PAG1Q9NWQ8 432 aa19.94■□□□□ 0.78
DNMT1-221ENST00000589538 AATFQ9NY61 560 aaKnown RBP eCLIP19.94■□□□□ 0.78
DNMT1-221ENST00000589538 NDUFB9Q9Y6M9 179 aa19.94■□□□□ 0.78
DNMT1-221ENST00000589538 OTOFQ9HC10 1997 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms