RNA–Protein interactions for RNA: ENST00000585953.5

RPRD1A-204, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 3

Gene RPRD1A, Length 2,357 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-204ENST00000585953 TMEM87AQ8NBN3 555 aa4.17□□□□□ -1.74
RPRD1A-204ENST00000585953 NOC4LQ9BVI4 516 aaKnown RBP4.17□□□□□ -1.74
RPRD1A-204ENST00000585953 KRTAP4-2Q9BYR5 136 aa4.17□□□□□ -1.74
RPRD1A-204ENST00000585953 CTSBP07858 339 aa4.17□□□□□ -1.74
RPRD1A-204ENST00000585953 NME2P22392 152 aa4.17□□□□□ -1.74
RPRD1A-204ENST00000585953 MAOBP27338 520 aa4.17□□□□□ -1.74
RPRD1A-204ENST00000585953 MBTPS1Q14703 1052 aa4.17□□□□□ -1.74
RPRD1A-204ENST00000585953 POU4F3Q15319 338 aa4.17□□□□□ -1.74
RPRD1A-204ENST00000585953 KIAA1211Q6ZU35 1233 aa4.17□□□□□ -1.74
RPRD1A-204ENST00000585953 ACAD11Q709F0 780 aa4.17□□□□□ -1.74
RPRD1A-204ENST00000585953 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.17□□□□□ -1.74
RPRD1A-204ENST00000585953 PDZD3Q86UT5 571 aa4.17□□□□□ -1.74
RPRD1A-204ENST00000585953 DLGAP3O95886 979 aa4.16□□□□□ -1.74
RPRD1A-204ENST00000585953 BMP6P22004 513 aa4.16□□□□□ -1.74
RPRD1A-204ENST00000585953 RASIP1Q5U651 963 aa4.16□□□□□ -1.74
RPRD1A-204ENST00000585953 PCNX4Q63HM2 1172 aa4.16□□□□□ -1.74
RPRD1A-204ENST00000585953 CORO1BQ9BR76 489 aa4.16□□□□□ -1.74
RPRD1A-204ENST00000585953 USP21Q9UK80 565 aa4.16□□□□□ -1.74
RPRD1A-204ENST00000585953 F8W735 103 aaPredicted RBP4.16□□□□□ -1.74
RPRD1A-204ENST00000585953 GSTP1P09211 210 aaKnown RBP4.16□□□□□ -1.74
RPRD1A-204ENST00000585953 ARNTP27540 789 aa4.16□□□□□ -1.74
RPRD1A-204ENST00000585953 FANCCQ00597 558 aa4.16□□□□□ -1.74
RPRD1A-204ENST00000585953 MAP3K11Q16584 847 aa4.16□□□□□ -1.74
RPRD1A-204ENST00000585953 AGGF1Q8N302 714 aaeCLIP4.16□□□□□ -1.74
RPRD1A-204ENST00000585953 TMEM130Q8N3G9 435 aa4.16□□□□□ -1.74
RPRD1A-204ENST00000585953 KRTAP9-8Q9BYQ0 159 aa4.16□□□□□ -1.74
RPRD1A-204ENST00000585953 SAMM50Q9Y512 469 aa4.16□□□□□ -1.74
RPRD1A-204ENST00000585953 SCAMP3O14828 347 aaKnown RBP4.15□□□□□ -1.75
RPRD1A-204ENST00000585953 LIG3P49916 1009 aa4.15□□□□□ -1.75
RPRD1A-204ENST00000585953 IRAK1P51617 712 aa4.15□□□□□ -1.75
RPRD1A-204ENST00000585953 ZNF252P-AS1Q0IIN9 211 aa4.15□□□□□ -1.75
RPRD1A-204ENST00000585953 TTBK2Q6IQ55 1244 aa4.15□□□□□ -1.75
RPRD1A-204ENST00000585953 SLC51AQ86UW1 340 aa4.15□□□□□ -1.75
RPRD1A-204ENST00000585953 RUSC1Q9BVN2 902 aa4.15□□□□□ -1.75
RPRD1A-204ENST00000585953 EMILIN2Q9BXX0 1053 aa4.15□□□□□ -1.75
RPRD1A-204ENST00000585953 AKTIPQ9H8T0 292 aa4.15□□□□□ -1.75
RPRD1A-204ENST00000585953 METTL5Q9NRN9 209 aaKnown RBP4.15□□□□□ -1.75
RPRD1A-204ENST00000585953 ALX3O95076 343 aa4.14□□□□□ -1.75
RPRD1A-204ENST00000585953 NOS3P29474 1203 aa4.14□□□□□ -1.75
RPRD1A-204ENST00000585953 ZNF76P36508 570 aa4.14□□□□□ -1.75
RPRD1A-204ENST00000585953 KRTAP5-3Q6L8H2 238 aa4.14□□□□□ -1.75
RPRD1A-204ENST00000585953 Q6ZS46 218 aa4.14□□□□□ -1.75
RPRD1A-204ENST00000585953 ERMP1Q7Z2K6 904 aa4.14□□□□□ -1.75
RPRD1A-204ENST00000585953 GRIN3AQ8TCU5 1115 aa4.14□□□□□ -1.75
RPRD1A-204ENST00000585953 TP53INP1Q96A56 240 aa4.14□□□□□ -1.75
RPRD1A-204ENST00000585953 TMPRSS13Q9BYE2 586 aa4.14□□□□□ -1.75
RPRD1A-204ENST00000585953 ZC3H12CQ9C0D7 883 aaKnown RBP4.14□□□□□ -1.75
RPRD1A-204ENST00000585953 RNF208Q9H0X6 261 aa4.14□□□□□ -1.75
RPRD1A-204ENST00000585953 CCDC86Q9H6F5 360 aaKnown RBP4.14□□□□□ -1.75
RPRD1A-204ENST00000585953 CBX8Q9HC52 389 aa4.14□□□□□ -1.75
RPRD1A-204ENST00000585953 E9PSI1 815 aa4.14□□□□□ -1.75
RPRD1A-204ENST00000585953 F6X3S4 739 aa4.14□□□□□ -1.75
RPRD1A-204ENST00000585953 RLBP1P12271 317 aa4.14□□□□□ -1.75
RPRD1A-204ENST00000585953 RPS26P62854 115 aaKnown RBP4.14□□□□□ -1.75
RPRD1A-204ENST00000585953 PDE3AQ14432 1141 aa4.14□□□□□ -1.75
RPRD1A-204ENST00000585953 HP1BP3Q5SSJ5 553 aaPredicted RBP4.14□□□□□ -1.75
RPRD1A-204ENST00000585953 LLGL2Q6P1M3 1020 aa4.14□□□□□ -1.75
RPRD1A-204ENST00000585953 AGMOQ6ZNB7 445 aa4.14□□□□□ -1.75
RPRD1A-204ENST00000585953 HS2ST1Q7LGA3 356 aa4.14□□□□□ -1.75
RPRD1A-204ENST00000585953 WFDC12Q8WWY7 111 aa4.14□□□□□ -1.75
RPRD1A-204ENST00000585953 KCNB2Q92953 911 aa4.14□□□□□ -1.75
RPRD1A-204ENST00000585953 KRT82Q9NSB4 513 aa4.14□□□□□ -1.75
RPRD1A-204ENST00000585953 PCMTD2Q9NV79 361 aa4.14□□□□□ -1.75
RPRD1A-204ENST00000585953 CYP8B1Q9UNU6 501 aa4.14□□□□□ -1.75
RPRD1A-204ENST00000585953 MEGF11A6BM72 1044 aa4.13□□□□□ -1.75
RPRD1A-204ENST00000585953 IREB2P48200 963 aaKnown RBP4.13□□□□□ -1.75
RPRD1A-204ENST00000585953 LRRC14Q15048 493 aa4.13□□□□□ -1.75
RPRD1A-204ENST00000585953 EXOSC6Q5RKV6 272 aaKnown RBP4.13□□□□□ -1.75
RPRD1A-204ENST00000585953 MAP1SQ66K74 1059 aaPredicted RBP4.13□□□□□ -1.75
RPRD1A-204ENST00000585953 MPRIPQ6WCQ1 1025 aa4.13□□□□□ -1.75
RPRD1A-204ENST00000585953 PHC3Q8NDX5 983 aa4.13□□□□□ -1.75
RPRD1A-204ENST00000585953 RSRP1Q9BUV0 290 aa4.13□□□□□ -1.75
RPRD1A-204ENST00000585953 SSBP4Q9BWG4 385 aaPredicted RBP4.13□□□□□ -1.75
RPRD1A-204ENST00000585953 COPRSQ9NQ92 184 aa4.13□□□□□ -1.75
RPRD1A-204ENST00000585953 CACNA2D2Q9NY47 1150 aa4.13□□□□□ -1.75
RPRD1A-204ENST00000585953 GGT7Q9UJ14 662 aa4.13□□□□□ -1.75
RPRD1A-204ENST00000585953 TLR6Q9Y2C9 796 aa4.13□□□□□ -1.75
RPRD1A-204ENST00000585953 ZNF862O60290 1169 aa4.13□□□□□ -1.75
RPRD1A-204ENST00000585953 TFE3P19532 575 aaPredicted RBP4.13□□□□□ -1.75
RPRD1A-204ENST00000585953 HDLBPQ00341 1268 aaKnown RBP4.13□□□□□ -1.75
RPRD1A-204ENST00000585953 METTL16Q86W50 562 aaKnown RBP4.13□□□□□ -1.75
RPRD1A-204ENST00000585953 RNF34Q969K3 372 aa4.13□□□□□ -1.75
RPRD1A-204ENST00000585953 GAL3ST3Q96A11 431 aa4.13□□□□□ -1.75
RPRD1A-204ENST00000585953 WDR89Q96FK6 387 aaPredicted RBP4.13□□□□□ -1.75
RPRD1A-204ENST00000585953 RHOVQ96L33 236 aa4.13□□□□□ -1.75
RPRD1A-204ENST00000585953 WDR18Q9BV38 432 aa4.13□□□□□ -1.75
RPRD1A-204ENST00000585953 SUGCTQ9HAC7 445 aa4.13□□□□□ -1.75
RPRD1A-204ENST00000585953 KBTBD4Q9NVX7 518 aa4.13□□□□□ -1.75
RPRD1A-204ENST00000585953 RNF114Q9Y508 228 aa4.13□□□□□ -1.75
RPRD1A-204ENST00000585953 TRIM37O94972 964 aa4.12□□□□□ -1.75
RPRD1A-204ENST00000585953 LIG1P18858 919 aa4.12□□□□□ -1.75
RPRD1A-204ENST00000585953 PWP1Q13610 501 aa4.12□□□□□ -1.75
RPRD1A-204ENST00000585953 NUTM2GQ5VZR2 741 aa4.12□□□□□ -1.75
RPRD1A-204ENST00000585953 SCARA3Q6AZY7 606 aa4.12□□□□□ -1.75
RPRD1A-204ENST00000585953 SMG8Q8ND04 991 aaKnown RBP4.12□□□□□ -1.75
RPRD1A-204ENST00000585953 GPBAR1Q8TDU6 330 aa4.12□□□□□ -1.75
RPRD1A-204ENST00000585953 TMEM74Q96NL1 305 aa4.12□□□□□ -1.75
RPRD1A-204ENST00000585953 PCDHB5Q9Y5E4 795 aa4.12□□□□□ -1.75
RPRD1A-204ENST00000585953 AOC2O75106 756 aa4.12□□□□□ -1.75
RPRD1A-204ENST00000585953 TIAF1O95411 115 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms