RNA–Protein interactions for RNA: ENST00000585894.5

RETREG3-203, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 1 (best) BASIC

Gene RETREG3, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-203ENST00000585894 CST9Q5W186 159 aa15.36■□□□□ 0.05
RETREG3-203ENST00000585894 NAA16Q6N069 864 aaPredicted RBP15.36■□□□□ 0.05
RETREG3-203ENST00000585894 CDAN1Q8IWY9 1227 aa15.36■□□□□ 0.05
RETREG3-203ENST00000585894 PI4K2BQ8TCG2 481 aa15.36■□□□□ 0.05
RETREG3-203ENST00000585894 GPATCH3Q96I76 525 aa15.36■□□□□ 0.05
RETREG3-203ENST00000585894 AK9Q5TCS8 1911 aa15.35■□□□□ 0.05
RETREG3-203ENST00000585894 CELF2O95319 508 aaKnown RBP15.35■□□□□ 0.05
RETREG3-203ENST00000585894 APOBEC3FQ8IUX4 373 aaKnown RBP15.35■□□□□ 0.05
RETREG3-203ENST00000585894 MAGEB6Q8N7X4 407 aa15.35■□□□□ 0.05
RETREG3-203ENST00000585894 DEFB129Q9H1M3 183 aa15.35■□□□□ 0.05
RETREG3-203ENST00000585894 USP40Q9NVE5 1235 aa15.35■□□□□ 0.05
RETREG3-203ENST00000585894 CNTNAP1P78357 1384 aa15.35■□□□□ 0.05
RETREG3-203ENST00000585894 NFIAQ12857 509 aa15.34■□□□□ 0.05
RETREG3-203ENST00000585894 RASA3Q14644 834 aa15.34■□□□□ 0.05
RETREG3-203ENST00000585894 FZD1Q9UP38 647 aa15.34■□□□□ 0.05
RETREG3-203ENST00000585894 TTC41PQ6P2S7 1318 aa15.34■□□□□ 0.05
RETREG3-203ENST00000585894 CYP7A1P22680 504 aa15.34■□□□□ 0.05
RETREG3-203ENST00000585894 PDE1AP54750 535 aa15.34■□□□□ 0.05
RETREG3-203ENST00000585894 GSTO1P78417 241 aa15.34■□□□□ 0.05
RETREG3-203ENST00000585894 FAM163AQ96GL9 167 aaPredicted RBP15.34■□□□□ 0.05
RETREG3-203ENST00000585894 TMEM39BQ9GZU3 492 aa15.34■□□□□ 0.05
RETREG3-203ENST00000585894 AATFQ9NY61 560 aaKnown RBP eCLIP15.34■□□□□ 0.05
RETREG3-203ENST00000585894 SSC5DA1L4H1 1573 aa15.34■□□□□ 0.05
RETREG3-203ENST00000585894 GPR75-ASB3A0A0A6YYF3 556 aa15.33■□□□□ 0.04
RETREG3-203ENST00000585894 PDE4AP27815 886 aa15.33■□□□□ 0.04
RETREG3-203ENST00000585894 DYNLL1P63167 89 aaKnown RBP15.33■□□□□ 0.04
RETREG3-203ENST00000585894 TCP10Q12799 353 aa15.33■□□□□ 0.04
RETREG3-203ENST00000585894 MAP3K12Q12852 859 aa15.33■□□□□ 0.04
RETREG3-203ENST00000585894 TTF1Q15361 905 aaPredicted RBP15.33■□□□□ 0.04
RETREG3-203ENST00000585894 SLF2Q8IX21 1173 aa15.33■□□□□ 0.04
RETREG3-203ENST00000585894 MIGA1Q8NAN2 632 aa15.33■□□□□ 0.04
RETREG3-203ENST00000585894 TMEM88BA6NKF7 163 aa15.32■□□□□ 0.04
RETREG3-203ENST00000585894 LDHCP07864 332 aa15.32■□□□□ 0.04
RETREG3-203ENST00000585894 PDE6AP16499 860 aa15.32■□□□□ 0.04
RETREG3-203ENST00000585894 RHBDL3P58872 404 aa15.32■□□□□ 0.04
RETREG3-203ENST00000585894 PRKG1Q13976 671 aa15.32■□□□□ 0.04
RETREG3-203ENST00000585894 SLC9C2Q5TAH2 1124 aa15.32■□□□□ 0.04
RETREG3-203ENST00000585894 MOB2Q70IA6 237 aa15.32■□□□□ 0.04
RETREG3-203ENST00000585894 SKAP1Q86WV1 359 aa15.32■□□□□ 0.04
RETREG3-203ENST00000585894 ZFPM1Q8IX07 1006 aa15.32■□□□□ 0.04
RETREG3-203ENST00000585894 SH3RF3Q8TEJ3 882 aaPredicted RBP15.32■□□□□ 0.04
RETREG3-203ENST00000585894 TMOD2Q9NZR1 351 aa15.32■□□□□ 0.04
RETREG3-203ENST00000585894 FOCADQ5VW36 1801 aa15.32■□□□□ 0.04
RETREG3-203ENST00000585894 ERC2O15083 957 aa15.31■□□□□ 0.04
RETREG3-203ENST00000585894 GLRX3O76003 335 aaKnown RBP15.31■□□□□ 0.04
RETREG3-203ENST00000585894 NBPF12Q5TAG4 269 aaPredicted RBP15.31■□□□□ 0.04
RETREG3-203ENST00000585894 PLEKHM2Q8IWE5 1019 aa15.31■□□□□ 0.04
RETREG3-203ENST00000585894 DDX4Q9NQI0 724 aaKnown RBP15.31■□□□□ 0.04
RETREG3-203ENST00000585894 FAM198AQ9UFP1 575 aa15.31■□□□□ 0.04
RETREG3-203ENST00000585894 STAP2Q9UGK3 403 aa15.31■□□□□ 0.04
RETREG3-203ENST00000585894 ZNF532Q9HCE3 1301 aa15.31■□□□□ 0.04
RETREG3-203ENST00000585894 RFX7Q2KHR2 1363 aa15.31■□□□□ 0.04
RETREG3-203ENST00000585894 WDHD1O75717 1129 aaPredicted RBP15.31■□□□□ 0.04
RETREG3-203ENST00000585894 RGS3P49796 1198 aa15.31■□□□□ 0.04
RETREG3-203ENST00000585894 PICALMQ13492 652 aa15.31■□□□□ 0.04
RETREG3-203ENST00000585894 TEPSINQ96N21 525 aa15.31■□□□□ 0.04
RETREG3-203ENST00000585894 ABT1Q9ULW3 272 aaKnown RBP15.31■□□□□ 0.04
RETREG3-203ENST00000585894 TCRBV5S4A2TA0A5A2 114 aa15.3■□□□□ 0.04
RETREG3-203ENST00000585894 TNFAIP1Q13829 316 aa15.3■□□□□ 0.04
RETREG3-203ENST00000585894 CREBZFQ9NS37 354 aa15.3■□□□□ 0.04
RETREG3-203ENST00000585894 OTOFQ9HC10 1997 aa15.29■□□□□ 0.04
RETREG3-203ENST00000585894 TEX11Q8IYF3 940 aa15.29■□□□□ 0.04
RETREG3-203ENST00000585894 CCDC136Q96JN2 1154 aa15.29■□□□□ 0.04
RETREG3-203ENST00000585894 NOL10Q9BSC4 688 aaKnown RBP15.29■□□□□ 0.04
RETREG3-203ENST00000585894 GBA2Q9HCG7 927 aaPredicted RBP15.29■□□□□ 0.04
RETREG3-203ENST00000585894 PAPPA2Q9BXP8 1791 aa15.29■□□□□ 0.04
RETREG3-203ENST00000585894 SLURP2P0DP57 97 aa15.29■□□□□ 0.04
RETREG3-203ENST00000585894 ADD2P35612 726 aa15.29■□□□□ 0.04
RETREG3-203ENST00000585894 TNNI2P48788 182 aa15.29■□□□□ 0.04
RETREG3-203ENST00000585894 KBTBD3Q8NAB2 608 aa15.29■□□□□ 0.04
RETREG3-203ENST00000585894 MKRN1Q9UHC7 482 aaKnown RBP15.29■□□□□ 0.04
RETREG3-203ENST00000585894 BAG3O95817 575 aa15.28■□□□□ 0.04
RETREG3-203ENST00000585894 TTLL12Q14166 644 aaPredicted RBP15.28■□□□□ 0.04
RETREG3-203ENST00000585894 FKBP1CQ5VVH2 108 aa15.28■□□□□ 0.04
RETREG3-203ENST00000585894 IDI2Q9BXS1 227 aa15.28■□□□□ 0.04
RETREG3-203ENST00000585894 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.28■□□□□ 0.04
RETREG3-203ENST00000585894 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.28■□□□□ 0.04
RETREG3-203ENST00000585894 PPP2R3BQ9Y5P8 575 aa15.28■□□□□ 0.04
RETREG3-203ENST00000585894 MYH1P12882 1939 aa15.27■□□□□ 0.04
RETREG3-203ENST00000585894 UBE2Q2LH0YL09 131 aa15.27■□□□□ 0.04
RETREG3-203ENST00000585894 PPP4CP60510 307 aa15.27■□□□□ 0.04
RETREG3-203ENST00000585894 CENPQQ7L2Z9 268 aaPredicted RBP15.27■□□□□ 0.04
RETREG3-203ENST00000585894 SH3BP5LQ7L8J4 393 aa15.27■□□□□ 0.04
RETREG3-203ENST00000585894 SAPCD2Q86UD0 394 aa15.27■□□□□ 0.04
RETREG3-203ENST00000585894 FAM83AQ86UY5 434 aa15.27■□□□□ 0.04
RETREG3-203ENST00000585894 MAPKAPK5Q8IW41 473 aa15.27■□□□□ 0.04
RETREG3-203ENST00000585894 LCORLQ8N3X6 602 aa15.27■□□□□ 0.04
RETREG3-203ENST00000585894 TGFBRAP1Q8WUH2 860 aa15.27■□□□□ 0.04
RETREG3-203ENST00000585894 FAM151AQ8WW52 585 aa15.27■□□□□ 0.04
RETREG3-203ENST00000585894 RIOK1Q9BRS2 568 aaKnown RBP15.27■□□□□ 0.04
RETREG3-203ENST00000585894 FSD1Q9BTV5 496 aa15.27■□□□□ 0.04
RETREG3-203ENST00000585894 TLL2Q9Y6L7 1015 aa15.27■□□□□ 0.04
RETREG3-203ENST00000585894 NAV1Q8NEY1 1877 aa15.27■□□□□ 0.03
RETREG3-203ENST00000585894 SIPA1L1O43166 1804 aa15.26■□□□□ 0.03
RETREG3-203ENST00000585894 MAGEB6P1A0A0J9YX57 407 aa15.26■□□□□ 0.03
RETREG3-203ENST00000585894 HUNKP57058 714 aa15.26■□□□□ 0.03
RETREG3-203ENST00000585894 GRM1Q13255 1194 aa15.26■□□□□ 0.03
RETREG3-203ENST00000585894 C2orf69Q8N8R5 385 aa15.26■□□□□ 0.03
RETREG3-203ENST00000585894 ARMT1Q9H993 441 aa15.26■□□□□ 0.03
RETREG3-203ENST00000585894 BAZ2AQ9UIF9 1905 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms