RNA–Protein interactions for RNA: ENST00000585315.5

CDH8-214, Transcript of cadherin 8, humanhuman

TSL 5

Gene CDH8, Length 9,076 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-214ENST00000585315 FAM83GA6ND36 823 aa8.21□□□□□ -1.1
CDH8-214ENST00000585315 CCDC160A6NGH7 325 aa8.21□□□□□ -1.1
CDH8-214ENST00000585315 ATP5J2-PTCD1G3V325 749 aa8.21□□□□□ -1.1
CDH8-214ENST00000585315 NEDD9Q14511 834 aa8.21□□□□□ -1.1
CDH8-214ENST00000585315 COPS6Q7L5N1 327 aa8.21□□□□□ -1.1
CDH8-214ENST00000585315 PPP1R9BQ96SB3 815 aa8.21□□□□□ -1.1
CDH8-214ENST00000585315 SELENOSQ9BQE4 189 aa8.21□□□□□ -1.1
CDH8-214ENST00000585315 GMNNO75496 209 aa8.21□□□□□ -1.1
CDH8-214ENST00000585315 HEATR3Q7Z4Q2 680 aa8.21□□□□□ -1.1
CDH8-214ENST00000585315 PLCB1Q9NQ66 1216 aa8.21□□□□□ -1.1
CDH8-214ENST00000585315 KCNG1Q9UIX4 513 aa8.21□□□□□ -1.1
CDH8-214ENST00000585315 IBTKQ9P2D0 1353 aaPredicted RBP8.21□□□□□ -1.1
CDH8-214ENST00000585315 TLDC2A0PJX2 215 aa8.2□□□□□ -1.1
CDH8-214ENST00000585315 SGSM2O43147 1006 aa8.2□□□□□ -1.1
CDH8-214ENST00000585315 NAA25Q14CX7 972 aa8.2□□□□□ -1.1
CDH8-214ENST00000585315 SV2BQ7L1I2 683 aa8.2□□□□□ -1.1
CDH8-214ENST00000585315 NLRP3Q96P20 1036 aa8.2□□□□□ -1.1
CDH8-214ENST00000585315 RPS6KB1P23443 525 aa8.2□□□□□ -1.1
CDH8-214ENST00000585315 C8orf58Q8NAV2 365 aa8.2□□□□□ -1.1
CDH8-214ENST00000585315 VAT1LQ9HCJ6 419 aa8.2□□□□□ -1.1
CDH8-214ENST00000585315 DENND4BO75064 1496 aaPredicted RBP8.2□□□□□ -1.1
CDH8-214ENST00000585315 FAM13AO94988 1023 aa8.2□□□□□ -1.1
CDH8-214ENST00000585315 SNX16P57768 344 aa8.2□□□□□ -1.1
CDH8-214ENST00000585315 CCDC38Q502W7 563 aa8.2□□□□□ -1.1
CDH8-214ENST00000585315 ZRANB1Q9UGI0 708 aa8.2□□□□□ -1.1
CDH8-214ENST00000585315 KDM2BQ8NHM5 1336 aa8.2□□□□□ -1.1
CDH8-214ENST00000585315 RIOK3O14730 519 aaKnown RBP8.2□□□□□ -1.1
CDH8-214ENST00000585315 SETSIPP0DME0 302 aa8.2□□□□□ -1.1
CDH8-214ENST00000585315 APBB1IPQ7Z5R6 666 aaPredicted RBP8.2□□□□□ -1.1
CDH8-214ENST00000585315 GTF3C6Q969F1 213 aa8.2□□□□□ -1.1
CDH8-214ENST00000585315 BIVM-ERCC5R4GMW8 1640 aa8.2□□□□□ -1.1
CDH8-214ENST00000585315 ERCC5P28715 1186 aaPredicted RBP8.2□□□□□ -1.1
CDH8-214ENST00000585315 NCBP1Q09161 790 aaKnown RBP8.2□□□□□ -1.1
CDH8-214ENST00000585315 LRRC2Q9BYS8 371 aa8.2□□□□□ -1.1
CDH8-214ENST00000585315 PARP2Q9UGN5 583 aa8.2□□□□□ -1.1
CDH8-214ENST00000585315 UGGT2Q9NYU1 1516 aa8.2□□□□□ -1.1
CDH8-214ENST00000585315 FANCAO15360 1455 aa8.2□□□□□ -1.1
CDH8-214ENST00000585315 ATP8B1O43520 1251 aa8.2□□□□□ -1.1
CDH8-214ENST00000585315 GPTP24298 496 aa8.2□□□□□ -1.1
CDH8-214ENST00000585315 CFAP157Q5JU67 520 aa8.2□□□□□ -1.1
CDH8-214ENST00000585315 LGSNQ5TDP6 509 aa8.2□□□□□ -1.1
CDH8-214ENST00000585315 MRVI1Q9Y6F6 885 aa8.2□□□□□ -1.1
CDH8-214ENST00000585315 CETN3O15182 167 aa8.2□□□□□ -1.1
CDH8-214ENST00000585315 GBP1P32455 592 aa8.2□□□□□ -1.1
CDH8-214ENST00000585315 IRX4P78413 519 aa8.2□□□□□ -1.1
CDH8-214ENST00000585315 FANCCQ00597 558 aa8.2□□□□□ -1.1
CDH8-214ENST00000585315 SH2D4BQ5SQS7 431 aa8.2□□□□□ -1.1
CDH8-214ENST00000585315 RBM26Q5T8P6 1007 aaKnown RBP8.2□□□□□ -1.1
CDH8-214ENST00000585315 KRBA2Q6ZNG9 492 aa8.2□□□□□ -1.1
CDH8-214ENST00000585315 SMARCC2Q8TAQ2 1214 aa8.2□□□□□ -1.1
CDH8-214ENST00000585315 CAPZA3Q96KX2 299 aa8.2□□□□□ -1.1
CDH8-214ENST00000585315 TESK2Q96S53 571 aa8.2□□□□□ -1.1
CDH8-214ENST00000585315 RBSNQ9H1K0 784 aa8.2□□□□□ -1.1
CDH8-214ENST00000585315 ZBTB7BO15156 539 aaPredicted RBP8.2□□□□□ -1.1
CDH8-214ENST00000585315 EPB41P11171 864 aaKnown RBP8.2□□□□□ -1.1
CDH8-214ENST00000585315 KARSQ15046 597 aaKnown RBP8.2□□□□□ -1.1
CDH8-214ENST00000585315 HSP90AA4PQ58FG1 418 aa8.2□□□□□ -1.1
CDH8-214ENST00000585315 ZMYM4Q5VZL5 1548 aa8.19□□□□□ -1.1
CDH8-214ENST00000585315 RLBP1P12271 317 aa8.19□□□□□ -1.1
CDH8-214ENST00000585315 APBA1Q02410 837 aa8.19□□□□□ -1.1
CDH8-214ENST00000585315 MAP3K21Q5TCX8 1036 aa8.19□□□□□ -1.1
CDH8-214ENST00000585315 SMC1BQ8NDV3 1235 aa8.19□□□□□ -1.1
CDH8-214ENST00000585315 MRFAP1L1Q96HT8 127 aa8.19□□□□□ -1.1
CDH8-214ENST00000585315 NOC4LQ9BVI4 516 aaKnown RBP8.19□□□□□ -1.1
CDH8-214ENST00000585315 SYNRGQ9UMZ2 1314 aa8.19□□□□□ -1.1
CDH8-214ENST00000585315 EEF2P13639 858 aaKnown RBP8.19□□□□□ -1.1
CDH8-214ENST00000585315 PCK1P35558 622 aa8.19□□□□□ -1.1
CDH8-214ENST00000585315 MAIP1Q8WWC4 291 aa8.19□□□□□ -1.1
CDH8-214ENST00000585315 LZTS2Q9BRK4 669 aa8.19□□□□□ -1.1
CDH8-214ENST00000585315 DDX21Q9NR30 783 aaKnown RBP eCLIP8.19□□□□□ -1.1
CDH8-214ENST00000585315 GAS8O95995 478 aa8.19□□□□□ -1.1
CDH8-214ENST00000585315 TRIML1Q8N9V2 468 aa8.19□□□□□ -1.1
CDH8-214ENST00000585315 CCDC63Q8NA47 563 aa8.19□□□□□ -1.1
CDH8-214ENST00000585315 LEO1Q8WVC0 666 aaPredicted RBP8.19□□□□□ -1.1
CDH8-214ENST00000585315 SECISBP2LQ93073 1101 aaKnown RBP8.19□□□□□ -1.1
CDH8-214ENST00000585315 NPATQ14207 1427 aa8.19□□□□□ -1.1
CDH8-214ENST00000585315 TRAF5O00463 557 aa8.19□□□□□ -1.1
CDH8-214ENST00000585315 RAB17Q9H0T7 212 aa8.19□□□□□ -1.1
CDH8-214ENST00000585315 NFE2L3Q9Y4A8 694 aa8.19□□□□□ -1.1
CDH8-214ENST00000585315 MAP3K5Q99683 1374 aa8.19□□□□□ -1.1
CDH8-214ENST00000585315 A0A1B0GVL5 298 aa8.19□□□□□ -1.1
CDH8-214ENST00000585315 POLKQ9UBT6 870 aa8.19□□□□□ -1.1
CDH8-214ENST00000585315 KRT9P35527 623 aa8.19□□□□□ -1.1
CDH8-214ENST00000585315 WHAMMP3Q1A5X7 153 aa8.19□□□□□ -1.1
CDH8-214ENST00000585315 CCDC62Q6P9F0 684 aa8.19□□□□□ -1.1
CDH8-214ENST00000585315 ZNF365Q70YC5 407 aa8.19□□□□□ -1.1
CDH8-214ENST00000585315 TRIM58Q8NG06 486 aa8.19□□□□□ -1.1
CDH8-214ENST00000585315 UBLCP1Q8WVY7 318 aaPredicted RBP8.19□□□□□ -1.1
CDH8-214ENST00000585315 ZNF202O95125 648 aa8.19□□□□□ -1.1
CDH8-214ENST00000585315 ARID5AQ03989 594 aa8.19□□□□□ -1.1
CDH8-214ENST00000585315 NBPF5PQ86XG9 351 aaPredicted RBP8.19□□□□□ -1.1
CDH8-214ENST00000585315 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.19□□□□□ -1.1
CDH8-214ENST00000585315 TCHPQ9BT92 498 aa8.19□□□□□ -1.1
CDH8-214ENST00000585315 NYXQ9GZU5 481 aa8.19□□□□□ -1.1
CDH8-214ENST00000585315 KCNK9Q9NPC2 374 aa8.19□□□□□ -1.1
CDH8-214ENST00000585315 HOMER3Q9NSC5 361 aa8.19□□□□□ -1.1
CDH8-214ENST00000585315 MAGEB6P1A0A0J9YX57 407 aa8.18□□□□□ -1.1
CDH8-214ENST00000585315 BRD1O95696 1058 aa8.18□□□□□ -1.1
CDH8-214ENST00000585315 VIMP08670 466 aaKnown RBP8.18□□□□□ -1.1
CDH8-214ENST00000585315 ZNF804AQ7Z570 1209 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms