RNA–Protein interactions for RNA: ENST00000580004.1

NEK4P2-201, Transcript of NIMA-related kinase 4 pseudogene 2, humanhuman

BASIC

Gene NEK4P2, Length 1,012 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4P2-201ENST00000580004 GPR75-ASB3A0A0A6YYF3 556 aa22.79■■□□□ 1.24
NEK4P2-201ENST00000580004 PPP1R12BO60237 982 aaPredicted RBP22.79■■□□□ 1.24
NEK4P2-201ENST00000580004 ZAP70P43403 619 aa22.79■■□□□ 1.24
NEK4P2-201ENST00000580004 TTF1Q15361 905 aaPredicted RBP22.79■■□□□ 1.24
NEK4P2-201ENST00000580004 MAP3K11Q16584 847 aa22.79■■□□□ 1.24
NEK4P2-201ENST00000580004 CDC42EP5Q6NZY7 148 aa22.79■■□□□ 1.24
NEK4P2-201ENST00000580004 TBC1D9Q6ZT07 1266 aa22.79■■□□□ 1.24
NEK4P2-201ENST00000580004 ARMC9Q7Z3E5 817 aa22.79■■□□□ 1.24
NEK4P2-201ENST00000580004 CCDC102AQ96A19 550 aa22.79■■□□□ 1.24
NEK4P2-201ENST00000580004 SNRKQ9NRH2 765 aa22.79■■□□□ 1.24
NEK4P2-201ENST00000580004 TCP10L2B9ZVM9 353 aa22.78■■□□□ 1.24
NEK4P2-201ENST00000580004 MAP2K2P36507 400 aa22.78■■□□□ 1.24
NEK4P2-201ENST00000580004 PRAMEF18Q5VWM3 479 aa22.78■■□□□ 1.24
NEK4P2-201ENST00000580004 RGMBQ6NW40 437 aa22.78■■□□□ 1.24
NEK4P2-201ENST00000580004 GCC1Q96CN9 775 aa22.78■■□□□ 1.24
NEK4P2-201ENST00000580004 SSC5DA1L4H1 1573 aa22.77■■□□□ 1.24
NEK4P2-201ENST00000580004 CERS3Q8IU89 383 aa22.77■■□□□ 1.24
NEK4P2-201ENST00000580004 ZNF384Q8TF68 577 aa22.77■■□□□ 1.24
NEK4P2-201ENST00000580004 FAM151AQ8WW52 585 aa22.77■■□□□ 1.24
NEK4P2-201ENST00000580004 TEPSINQ96N21 525 aa22.77■■□□□ 1.24
NEK4P2-201ENST00000580004 IDI2Q9BXS1 227 aa22.77■■□□□ 1.24
NEK4P2-201ENST00000580004 USP40Q9NVE5 1235 aa22.77■■□□□ 1.24
NEK4P2-201ENST00000580004 NPM3O75607 178 aaKnown RBP22.76■■□□□ 1.23
NEK4P2-201ENST00000580004 ATP5JP18859 108 aa22.76■■□□□ 1.23
NEK4P2-201ENST00000580004 NOGQ13253 232 aa22.76■■□□□ 1.23
NEK4P2-201ENST00000580004 CYP4F22Q6NT55 531 aa22.76■■□□□ 1.23
NEK4P2-201ENST00000580004 PAXIP1Q6ZW49 1069 aaPredicted RBP22.76■■□□□ 1.23
NEK4P2-201ENST00000580004 RFX7Q2KHR2 1363 aa22.76■■□□□ 1.23
NEK4P2-201ENST00000580004 ENTPD3O75355 529 aa22.75■■□□□ 1.23
NEK4P2-201ENST00000580004 BTDP43251 543 aa22.75■■□□□ 1.23
NEK4P2-201ENST00000580004 TTLL12Q14166 644 aaPredicted RBP22.75■■□□□ 1.23
NEK4P2-201ENST00000580004 NBPF12Q5TAG4 269 aaPredicted RBP22.75■■□□□ 1.23
NEK4P2-201ENST00000580004 NAA16Q6N069 864 aaPredicted RBP22.75■■□□□ 1.23
NEK4P2-201ENST00000580004 GPATCH3Q96I76 525 aa22.75■■□□□ 1.23
NEK4P2-201ENST00000580004 TMEM39BQ9GZU3 492 aa22.75■■□□□ 1.23
NEK4P2-201ENST00000580004 BAG3O95817 575 aa22.74■■□□□ 1.23
NEK4P2-201ENST00000580004 PLCG2P16885 1265 aa22.74■■□□□ 1.23
NEK4P2-201ENST00000580004 IREB2P48200 963 aaKnown RBP22.74■■□□□ 1.23
NEK4P2-201ENST00000580004 ZNF157P51786 506 aaPredicted RBP22.74■■□□□ 1.23
NEK4P2-201ENST00000580004 MAP2K1Q02750 393 aaPredicted RBP22.74■■□□□ 1.23
NEK4P2-201ENST00000580004 MAP3K12Q12852 859 aa22.74■■□□□ 1.23
NEK4P2-201ENST00000580004 LDLRAD1Q5T700 205 aa22.74■■□□□ 1.23
NEK4P2-201ENST00000580004 NOL10Q9BSC4 688 aaKnown RBP22.74■■□□□ 1.23
NEK4P2-201ENST00000580004 AK9Q5TCS8 1911 aa22.74■■□□□ 1.23
NEK4P2-201ENST00000580004 CACNB3P54284 484 aa22.73■■□□□ 1.23
NEK4P2-201ENST00000580004 PPP4CP60510 307 aa22.73■■□□□ 1.23
NEK4P2-201ENST00000580004 EXOC6Q8TAG9 804 aa22.73■■□□□ 1.23
NEK4P2-201ENST00000580004 RWDD1Q9H446 243 aaPredicted RBP22.73■■□□□ 1.23
NEK4P2-201ENST00000580004 PIH1D3Q9NQM4 214 aaKnown RBP22.73■■□□□ 1.23
NEK4P2-201ENST00000580004 LAMB1P07942 1786 aa22.72■■□□□ 1.23
NEK4P2-201ENST00000580004 SMARCA5O60264 1052 aaPredicted RBP22.72■■□□□ 1.23
NEK4P2-201ENST00000580004 SLC10A3P09131 477 aa22.72■■□□□ 1.23
NEK4P2-201ENST00000580004 RHBDL3P58872 404 aa22.72■■□□□ 1.23
NEK4P2-201ENST00000580004 REM2Q8IYK8 340 aaPredicted RBP22.72■■□□□ 1.23
NEK4P2-201ENST00000580004 HAUS7Q99871 368 aa22.72■■□□□ 1.23
NEK4P2-201ENST00000580004 ECHDC1Q9NTX5 307 aa22.72■■□□□ 1.23
NEK4P2-201ENST00000580004 ZBTB47Q9UFB7 747 aaPredicted RBP22.72■■□□□ 1.23
NEK4P2-201ENST00000580004 ANGEL1Q9UNK9 670 aaKnown RBP22.72■■□□□ 1.23
NEK4P2-201ENST00000580004 FOCADQ5VW36 1801 aa22.72■■□□□ 1.23
NEK4P2-201ENST00000580004 COL2A1P02458 1487 aaPredicted RBP22.72■■□□□ 1.23
NEK4P2-201ENST00000580004 FAM155AB1AL88 458 aaPredicted RBP22.71■■□□□ 1.23
NEK4P2-201ENST00000580004 UBE2Q2LH0YL09 131 aa22.71■■□□□ 1.23
NEK4P2-201ENST00000580004 IDH1O75874 414 aaKnown RBP22.71■■□□□ 1.23
NEK4P2-201ENST00000580004 DCAF15Q66K64 600 aa22.71■■□□□ 1.23
NEK4P2-201ENST00000580004 FAM198AQ9UFP1 575 aa22.71■■□□□ 1.23
NEK4P2-201ENST00000580004 MYH7P12883 1935 aa22.7■■□□□ 1.23
NEK4P2-201ENST00000580004 OTOFQ9HC10 1997 aa22.7■■□□□ 1.23
NEK4P2-201ENST00000580004 USP2O75604 605 aaPredicted RBP22.7■■□□□ 1.22
NEK4P2-201ENST00000580004 WDHD1O75717 1129 aaPredicted RBP22.7■■□□□ 1.22
NEK4P2-201ENST00000580004 NFIAQ12857 509 aa22.7■■□□□ 1.22
NEK4P2-201ENST00000580004 ANKRD13AQ8IZ07 590 aa22.7■■□□□ 1.22
NEK4P2-201ENST00000580004 TTC41PQ6P2S7 1318 aa22.7■■□□□ 1.22
NEK4P2-201ENST00000580004 CDK5RAP2Q96SN8 1893 aa22.7■■□□□ 1.22
NEK4P2-201ENST00000580004 RGS3P49796 1198 aa22.69■■□□□ 1.22
NEK4P2-201ENST00000580004 MOB2Q70IA6 237 aa22.69■■□□□ 1.22
NEK4P2-201ENST00000580004 RASAL3Q86YV0 1011 aa22.69■■□□□ 1.22
NEK4P2-201ENST00000580004 ANTXR1Q9H6X2 564 aa22.69■■□□□ 1.22
NEK4P2-201ENST00000580004 PAG1Q9NWQ8 432 aa22.69■■□□□ 1.22
NEK4P2-201ENST00000580004 ATRNL1Q5VV63 1379 aa22.68■■□□□ 1.22
NEK4P2-201ENST00000580004 GRM1Q13255 1194 aa22.68■■□□□ 1.22
NEK4P2-201ENST00000580004 PRKG1Q13976 671 aa22.68■■□□□ 1.22
NEK4P2-201ENST00000580004 SMC5Q8IY18 1101 aa22.68■■□□□ 1.22
NEK4P2-201ENST00000580004 DNAJC2Q99543 621 aaKnown RBP22.68■■□□□ 1.22
NEK4P2-201ENST00000580004 WBP1LQ9NX94 342 aa22.68■■□□□ 1.22
NEK4P2-201ENST00000580004 GOLIM4O00461 696 aa22.67■■□□□ 1.22
NEK4P2-201ENST00000580004 CYP7A1P22680 504 aa22.67■■□□□ 1.22
NEK4P2-201ENST00000580004 TCP10Q12799 353 aa22.67■■□□□ 1.22
NEK4P2-201ENST00000580004 MAGEB6Q8N7X4 407 aa22.67■■□□□ 1.22
NEK4P2-201ENST00000580004 BOLA2Q9H3K6 86 aa22.67■■□□□ 1.22
NEK4P2-201ENST00000580004 NDUFB9Q9Y6M9 179 aa22.67■■□□□ 1.22
NEK4P2-201ENST00000580004 ERC2O15083 957 aa22.66■■□□□ 1.22
NEK4P2-201ENST00000580004 ADGRA1Q86SQ6 560 aa22.66■■□□□ 1.22
NEK4P2-201ENST00000580004 CDAN1Q8IWY9 1227 aa22.66■■□□□ 1.22
NEK4P2-201ENST00000580004 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.66■■□□□ 1.22
NEK4P2-201ENST00000580004 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.66■■□□□ 1.22
NEK4P2-201ENST00000580004 BCL11AQ9H165 835 aa22.66■■□□□ 1.22
NEK4P2-201ENST00000580004 AATFQ9NY61 560 aaKnown RBP eCLIP22.66■■□□□ 1.22
NEK4P2-201ENST00000580004 CA12O43570 354 aa22.65■■□□□ 1.22
NEK4P2-201ENST00000580004 AOC2O75106 756 aa22.65■■□□□ 1.22
NEK4P2-201ENST00000580004 ZBTB48P10074 688 aaPredicted RBP22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms