RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 RRP36Q96EU6 259 aaKnown RBP12.05□□□□□ -0.48
SEC22B-201ENST00000578049 CPSF2Q9P2I0 782 aaKnown RBP12.05□□□□□ -0.48
SEC22B-201ENST00000578049 ANGEL1Q9UNK9 670 aaKnown RBP12.05□□□□□ -0.48
SEC22B-201ENST00000578049 TRAPPC8Q9Y2L5 1435 aa12.05□□□□□ -0.48
SEC22B-201ENST00000578049 SECISBP2LQ93073 1101 aaKnown RBP12.05□□□□□ -0.48
SEC22B-201ENST00000578049 TMEM63CQ9P1W3 806 aa12.05□□□□□ -0.48
SEC22B-201ENST00000578049 STX17P56962 302 aa12.05□□□□□ -0.48
SEC22B-201ENST00000578049 ETF1P62495 437 aaKnown RBP12.05□□□□□ -0.48
SEC22B-201ENST00000578049 ARHGAP24Q8N264 748 aa12.05□□□□□ -0.48
SEC22B-201ENST00000578049 EXOC5O00471 708 aa12.04□□□□□ -0.48
SEC22B-201ENST00000578049 CHL1O00533 1208 aa12.04□□□□□ -0.48
SEC22B-201ENST00000578049 GPTP24298 496 aa12.04□□□□□ -0.48
SEC22B-201ENST00000578049 ARID4AP29374 1257 aaPredicted RBP12.04□□□□□ -0.48
SEC22B-201ENST00000578049 APBA1Q02410 837 aa12.04□□□□□ -0.48
SEC22B-201ENST00000578049 MTHFSDQ2M296 383 aaKnown RBP12.04□□□□□ -0.48
SEC22B-201ENST00000578049 UTP14CQ5TAP6 766 aaKnown RBP12.04□□□□□ -0.48
SEC22B-201ENST00000578049 HEATR3Q7Z4Q2 680 aa12.04□□□□□ -0.48
SEC22B-201ENST00000578049 MPHOSPH6Q99547 160 aaKnown RBP12.04□□□□□ -0.48
SEC22B-201ENST00000578049 TEX14Q8IWB6 1497 aa12.04□□□□□ -0.48
SEC22B-201ENST00000578049 SYNRGQ9UMZ2 1314 aa12.04□□□□□ -0.48
SEC22B-201ENST00000578049 PPFIA3O75145 1194 aa12.04□□□□□ -0.48
SEC22B-201ENST00000578049 TAOK1Q7L7X3 1001 aa12.04□□□□□ -0.48
SEC22B-201ENST00000578049 CERS3Q8IU89 383 aa12.04□□□□□ -0.48
SEC22B-201ENST00000578049 TRIML1Q8N9V2 468 aa12.04□□□□□ -0.48
SEC22B-201ENST00000578049 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.04□□□□□ -0.48
SEC22B-201ENST00000578049 SCLT1Q96NL6 688 aa12.04□□□□□ -0.48
SEC22B-201ENST00000578049 CARD14Q9BXL6 1004 aa12.04□□□□□ -0.48
SEC22B-201ENST00000578049 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.04□□□□□ -0.48
SEC22B-201ENST00000578049 TSNAXIP1Q2TAA8 658 aa12.04□□□□□ -0.48
SEC22B-201ENST00000578049 SV2BQ7L1I2 683 aa12.04□□□□□ -0.48
SEC22B-201ENST00000578049 STMN2Q93045 179 aa12.04□□□□□ -0.48
SEC22B-201ENST00000578049 NOC4LQ9BVI4 516 aaKnown RBP12.04□□□□□ -0.48
SEC22B-201ENST00000578049 ANAPC4Q9UJX5 808 aa12.04□□□□□ -0.48
SEC22B-201ENST00000578049 FOXO3O43524 673 aa12.04□□□□□ -0.48
SEC22B-201ENST00000578049 CABS1Q96KC9 395 aa12.04□□□□□ -0.48
SEC22B-201ENST00000578049 RIMS2Q9UQ26 1411 aa12.04□□□□□ -0.48
SEC22B-201ENST00000578049 ZNF202O95125 648 aa12.04□□□□□ -0.48
SEC22B-201ENST00000578049 NFE2L3Q9Y4A8 694 aa12.04□□□□□ -0.48
SEC22B-201ENST00000578049 MAGEB6P1A0A0J9YX57 407 aa12.03□□□□□ -0.48
SEC22B-201ENST00000578049 PAK1Q13153 545 aa12.03□□□□□ -0.48
SEC22B-201ENST00000578049 ADALQ6DHV7 355 aa12.03□□□□□ -0.48
SEC22B-201ENST00000578049 WDR66Q8TBY9 1149 aa12.03□□□□□ -0.48
SEC22B-201ENST00000578049 VAT1LQ9HCJ6 419 aa12.03□□□□□ -0.48
SEC22B-201ENST00000578049 PLCB1Q9NQ66 1216 aa12.03□□□□□ -0.48
SEC22B-201ENST00000578049 OAS2P29728 719 aaKnown RBP12.03□□□□□ -0.48
SEC22B-201ENST00000578049 SLC9C1Q4G0N8 1177 aa12.03□□□□□ -0.48
SEC22B-201ENST00000578049 APPBP2Q92624 585 aa12.03□□□□□ -0.48
SEC22B-201ENST00000578049 TRPM2O94759 1503 aa12.03□□□□□ -0.48
SEC22B-201ENST00000578049 TLDC2A0PJX2 215 aa12.03□□□□□ -0.48
SEC22B-201ENST00000578049 ZSCAN26Q16670 478 aa12.03□□□□□ -0.48
SEC22B-201ENST00000578049 CFAP221Q4G0U5 840 aa12.03□□□□□ -0.48
SEC22B-201ENST00000578049 WWC3Q9ULE0 1092 aa12.03□□□□□ -0.48
SEC22B-201ENST00000578049 ANXA1P04083 346 aa12.03□□□□□ -0.48
SEC22B-201ENST00000578049 PAIP2Q9BPZ3 127 aaKnown RBP12.03□□□□□ -0.48
SEC22B-201ENST00000578049 USH1CQ9Y6N9 552 aa12.03□□□□□ -0.48
SEC22B-201ENST00000578049 A2MP01023 1474 aa12.03□□□□□ -0.48
SEC22B-201ENST00000578049 NAA25Q14CX7 972 aa12.02□□□□□ -0.48
SEC22B-201ENST00000578049 PPP1R7Q15435 360 aa12.02□□□□□ -0.48
SEC22B-201ENST00000578049 FYB2Q5VWT5 728 aa12.02□□□□□ -0.48
SEC22B-201ENST00000578049 KRT28Q7Z3Y7 464 aa12.02□□□□□ -0.48
SEC22B-201ENST00000578049 SYCE1Q8N0S2 351 aa12.02□□□□□ -0.48
SEC22B-201ENST00000578049 PA2G4Q9UQ80 394 aaKnown RBP12.02□□□□□ -0.48
SEC22B-201ENST00000578049 UHRF1BP1LA0JNW5 1464 aa12.02□□□□□ -0.48
SEC22B-201ENST00000578049 KRT9P35527 623 aa12.02□□□□□ -0.48
SEC22B-201ENST00000578049 KBTBD3Q8NAB2 608 aa12.02□□□□□ -0.48
SEC22B-201ENST00000578049 ZFP91Q96JP5 570 aaPredicted RBP12.02□□□□□ -0.48
SEC22B-201ENST00000578049 GSTA5Q7RTV2 222 aa12.02□□□□□ -0.49
SEC22B-201ENST00000578049 A0A1W2PP64 1363 aa12.02□□□□□ -0.49
SEC22B-201ENST00000578049 NOL3O60936 208 aaKnown RBP12.02□□□□□ -0.49
SEC22B-201ENST00000578049 CIB2O75838 187 aa12.02□□□□□ -0.49
SEC22B-201ENST00000578049 CCDC14Q49A88 953 aa12.02□□□□□ -0.49
SEC22B-201ENST00000578049 ADGRL2O95490 1459 aa12.02□□□□□ -0.49
SEC22B-201ENST00000578049 EYA2O00167 538 aa12.02□□□□□ -0.49
SEC22B-201ENST00000578049 FAM13AO94988 1023 aa12.02□□□□□ -0.49
SEC22B-201ENST00000578049 UBLCP1Q8WVY7 318 aaPredicted RBP12.02□□□□□ -0.49
SEC22B-201ENST00000578049 UTP11Q9Y3A2 253 aaKnown RBP12.02□□□□□ -0.49
SEC22B-201ENST00000578049 KDM5DQ9BY66 1539 aa12.02□□□□□ -0.49
SEC22B-201ENST00000578049 NUP153P49790 1475 aaKnown RBP12.02□□□□□ -0.49
SEC22B-201ENST00000578049 FAM135BQ49AJ0 1406 aa12.02□□□□□ -0.49
SEC22B-201ENST00000578049 GBP1P32455 592 aa12.02□□□□□ -0.49
SEC22B-201ENST00000578049 SEPT6Q14141 434 aa12.02□□□□□ -0.49
SEC22B-201ENST00000578049 SYNCQ9H7C4 482 aa12.02□□□□□ -0.49
SEC22B-201ENST00000578049 NBPF6Q5VWK0 638 aa12.01□□□□□ -0.49
SEC22B-201ENST00000578049 NBPF4Q96M43 638 aa12.01□□□□□ -0.49
SEC22B-201ENST00000578049 DSCC1Q9BVC3 393 aa12.01□□□□□ -0.49
SEC22B-201ENST00000578049 FEZ2Q9UHY8 353 aaPredicted RBP12.01□□□□□ -0.49
SEC22B-201ENST00000578049 SAMM50Q9Y512 469 aa12.01□□□□□ -0.49
SEC22B-201ENST00000578049 CDC25BP30305 580 aa12.01□□□□□ -0.49
SEC22B-201ENST00000578049 UBL4BQ8N7F7 174 aa12.01□□□□□ -0.49
SEC22B-201ENST00000578049 VCXQ9H320 206 aa12.01□□□□□ -0.49
SEC22B-201ENST00000578049 ABCC1P33527 1531 aa12.01□□□□□ -0.49
SEC22B-201ENST00000578049 ABCC4O15439 1325 aa12.01□□□□□ -0.49
SEC22B-201ENST00000578049 RBM6P78332 1123 aaKnown RBP12.01□□□□□ -0.49
SEC22B-201ENST00000578049 CADPS2Q86UW7 1296 aa12.01□□□□□ -0.49
SEC22B-201ENST00000578049 BICD1Q96G01 975 aa12.01□□□□□ -0.49
SEC22B-201ENST00000578049 PARP2Q9UGN5 583 aa12.01□□□□□ -0.49
SEC22B-201ENST00000578049 RGS12O14924 1447 aa12.01□□□□□ -0.49
SEC22B-201ENST00000578049 SPDYE3A6NKU9 549 aa12.01□□□□□ -0.49
SEC22B-201ENST00000578049 DIS3L2Q8IYB7 885 aaKnown RBP12.01□□□□□ -0.49
SEC22B-201ENST00000578049 CSGALNACT2Q8N6G5 542 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms