RNA–Protein interactions for RNA: ENST00000574964.1

NPLOC4-218, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-218ENST00000574964 POTEJP0CG39 1038 aa17.53■□□□□ 0.4
NPLOC4-218ENST00000574964 ADD2P35612 726 aa17.53■□□□□ 0.4
NPLOC4-218ENST00000574964 ANGEL2Q5VTE6 544 aaKnown RBP17.53■□□□□ 0.4
NPLOC4-218ENST00000574964 ZNF384Q8TF68 577 aa17.53■□□□□ 0.4
NPLOC4-218ENST00000574964 ZBED3Q96IU2 234 aaPredicted RBP17.53■□□□□ 0.4
NPLOC4-218ENST00000574964 USP40Q9NVE5 1235 aa17.53■□□□□ 0.4
NPLOC4-218ENST00000574964 GGA3Q9NZ52 723 aa17.53■□□□□ 0.4
NPLOC4-218ENST00000574964 ASTN2O75129 1339 aaPredicted RBP17.52■□□□□ 0.4
NPLOC4-218ENST00000574964 GPR75-ASB3A0A0A6YYF3 556 aa17.52■□□□□ 0.4
NPLOC4-218ENST00000574964 RNF113AO15541 343 aaKnown RBP17.52■□□□□ 0.4
NPLOC4-218ENST00000574964 TOMM70O94826 608 aa17.52■□□□□ 0.4
NPLOC4-218ENST00000574964 UBE3CQ15386 1083 aa17.52■□□□□ 0.4
NPLOC4-218ENST00000574964 APOBEC3HQ6NTF7 200 aaKnown RBP17.52■□□□□ 0.4
NPLOC4-218ENST00000574964 CHADLQ6NUI6 762 aa17.52■□□□□ 0.4
NPLOC4-218ENST00000574964 AATFQ9NY61 560 aaKnown RBP eCLIP17.52■□□□□ 0.4
NPLOC4-218ENST00000574964 ZNF70Q9UC06 446 aaPredicted RBP17.52■□□□□ 0.4
NPLOC4-218ENST00000574964 CDK5RAP2Q96SN8 1893 aa17.52■□□□□ 0.39
NPLOC4-218ENST00000574964 PLCG2P16885 1265 aa17.51■□□□□ 0.39
NPLOC4-218ENST00000574964 SPDYE2Q495Y8 402 aa17.51■□□□□ 0.39
NPLOC4-218ENST00000574964 MAP1SQ66K74 1059 aaPredicted RBP17.51■□□□□ 0.39
NPLOC4-218ENST00000574964 APOBEC3FQ8IUX4 373 aaKnown RBP17.51■□□□□ 0.39
NPLOC4-218ENST00000574964 SULF1Q8IWU6 871 aa17.51■□□□□ 0.39
NPLOC4-218ENST00000574964 MIGA1Q8NAN2 632 aa17.51■□□□□ 0.39
NPLOC4-218ENST00000574964 MAGEB6P1A0A0J9YX57 407 aa17.5■□□□□ 0.39
NPLOC4-218ENST00000574964 GSPT1P15170 499 aaKnown RBP17.5■□□□□ 0.39
NPLOC4-218ENST00000574964 TNNI2P48788 182 aa17.5■□□□□ 0.39
NPLOC4-218ENST00000574964 TNFAIP1Q13829 316 aa17.5■□□□□ 0.39
NPLOC4-218ENST00000574964 CDC42EP5Q6NZY7 148 aa17.5■□□□□ 0.39
NPLOC4-218ENST00000574964 ADGRA1Q86SQ6 560 aa17.5■□□□□ 0.39
NPLOC4-218ENST00000574964 CERS3Q8IU89 383 aa17.5■□□□□ 0.39
NPLOC4-218ENST00000574964 SMC1BQ8NDV3 1235 aa17.5■□□□□ 0.39
NPLOC4-218ENST00000574964 PGAP2Q9UHJ9 254 aa17.5■□□□□ 0.39
NPLOC4-218ENST00000574964 PITPNM2Q9BZ72 1349 aa17.49■□□□□ 0.39
NPLOC4-218ENST00000574964 MYH1P12882 1939 aa17.49■□□□□ 0.39
NPLOC4-218ENST00000574964 TCP10L2B9ZVM9 353 aa17.49■□□□□ 0.39
NPLOC4-218ENST00000574964 SDSP20132 328 aa17.49■□□□□ 0.39
NPLOC4-218ENST00000574964 CDC37L1Q7L3B6 337 aa17.49■□□□□ 0.39
NPLOC4-218ENST00000574964 KRT26Q7Z3Y9 468 aa17.49■□□□□ 0.39
NPLOC4-218ENST00000574964 TEX11Q8IYF3 940 aa17.49■□□□□ 0.39
NPLOC4-218ENST00000574964 RBM46Q8TBY0 533 aaKnown RBP17.49■□□□□ 0.39
NPLOC4-218ENST00000574964 APPBP2Q92624 585 aa17.49■□□□□ 0.39
NPLOC4-218ENST00000574964 TRPM7Q96QT4 1865 aa17.48■□□□□ 0.39
NPLOC4-218ENST00000574964 TCRBV5S4A2TA0A5A2 114 aa17.48■□□□□ 0.39
NPLOC4-218ENST00000574964 HIP1O00291 1037 aa17.48■□□□□ 0.39
NPLOC4-218ENST00000574964 CACNB3P54284 484 aa17.48■□□□□ 0.39
NPLOC4-218ENST00000574964 PPP4CP60510 307 aa17.48■□□□□ 0.39
NPLOC4-218ENST00000574964 DYNLL1P63167 89 aaKnown RBP17.48■□□□□ 0.39
NPLOC4-218ENST00000574964 SLFNL1Q499Z3 407 aa17.48■□□□□ 0.39
NPLOC4-218ENST00000574964 USP48Q86UV5 1035 aa17.48■□□□□ 0.39
NPLOC4-218ENST00000574964 TICAM2Q86XR7 235 aa17.48■□□□□ 0.39
NPLOC4-218ENST00000574964 AIDAQ96BJ3 306 aa17.48■□□□□ 0.39
NPLOC4-218ENST00000574964 DIAPH3Q9NSV4 1193 aa17.48■□□□□ 0.39
NPLOC4-218ENST00000574964 SCAF8Q9UPN6 1271 aaKnown RBP17.48■□□□□ 0.39
NPLOC4-218ENST00000574964 FOCADQ5VW36 1801 aa17.48■□□□□ 0.39
NPLOC4-218ENST00000574964 CHGBP05060 677 aa17.47■□□□□ 0.39
NPLOC4-218ENST00000574964 SH3RF3Q8TEJ3 882 aaPredicted RBP17.47■□□□□ 0.39
NPLOC4-218ENST00000574964 GLIS2Q9BZE0 524 aaPredicted RBP17.47■□□□□ 0.39
NPLOC4-218ENST00000574964 RFX7Q2KHR2 1363 aa17.47■□□□□ 0.39
NPLOC4-218ENST00000574964 ADM5C9JUS6 153 aa17.46■□□□□ 0.39
NPLOC4-218ENST00000574964 MBD4O95243 580 aa17.46■□□□□ 0.39
NPLOC4-218ENST00000574964 USP5P45974 858 aa17.46■□□□□ 0.39
NPLOC4-218ENST00000574964 RHBDL3P58872 404 aa17.46■□□□□ 0.39
NPLOC4-218ENST00000574964 PICALMQ13492 652 aa17.46■□□□□ 0.39
NPLOC4-218ENST00000574964 FKBP1CQ5VVH2 108 aa17.46■□□□□ 0.39
NPLOC4-218ENST00000574964 CRNKL1Q9BZJ0 848 aaKnown RBP17.46■□□□□ 0.39
NPLOC4-218ENST00000574964 DEFB129Q9H1M3 183 aa17.46■□□□□ 0.39
NPLOC4-218ENST00000574964 ARMT1Q9H993 441 aa17.46■□□□□ 0.39
NPLOC4-218ENST00000574964 BAZ2AQ9UIF9 1905 aaKnown RBP17.46■□□□□ 0.39
NPLOC4-218ENST00000574964 TCP10Q12799 353 aa17.45■□□□□ 0.38
NPLOC4-218ENST00000574964 FSTL1Q12841 308 aa17.45■□□□□ 0.38
NPLOC4-218ENST00000574964 RASA3Q14644 834 aa17.45■□□□□ 0.38
NPLOC4-218ENST00000574964 BMP2KLQ5H9B9 411 aa17.45■□□□□ 0.38
NPLOC4-218ENST00000574964 ZMYM1Q5SVZ6 1142 aa17.45■□□□□ 0.38
NPLOC4-218ENST00000574964 TGFBRAP1Q8WUH2 860 aa17.45■□□□□ 0.38
NPLOC4-218ENST00000574964 PUS7LQ9H0K6 701 aaKnown RBP17.45■□□□□ 0.38
NPLOC4-218ENST00000574964 NAV1Q8NEY1 1877 aa17.44■□□□□ 0.38
NPLOC4-218ENST00000574964 NFIAQ12857 509 aa17.44■□□□□ 0.38
NPLOC4-218ENST00000574964 NMIQ13287 307 aaPredicted RBP17.44■□□□□ 0.38
NPLOC4-218ENST00000574964 FAM83AQ86UY5 434 aa17.44■□□□□ 0.38
NPLOC4-218ENST00000574964 ZSCAN29Q8IWY8 852 aaPredicted RBP17.44■□□□□ 0.38
NPLOC4-218ENST00000574964 LCORLQ8N3X6 602 aa17.44■□□□□ 0.38
NPLOC4-218ENST00000574964 OSBP2Q969R2 916 aa17.44■□□□□ 0.38
NPLOC4-218ENST00000574964 RIOK1Q9BRS2 568 aaKnown RBP17.44■□□□□ 0.38
NPLOC4-218ENST00000574964 IDI2Q9BXS1 227 aa17.44■□□□□ 0.38
NPLOC4-218ENST00000574964 HELLSQ9NRZ9 838 aa17.44■□□□□ 0.38
NPLOC4-218ENST00000574964 PPP2R3BQ9Y5P8 575 aa17.44■□□□□ 0.38
NPLOC4-218ENST00000574964 GPAA1O43292 621 aa17.43■□□□□ 0.38
NPLOC4-218ENST00000574964 ENTPD3O75355 529 aa17.43■□□□□ 0.38
NPLOC4-218ENST00000574964 WDHD1O75717 1129 aaPredicted RBP17.43■□□□□ 0.38
NPLOC4-218ENST00000574964 NF2P35240 595 aa17.43■□□□□ 0.38
NPLOC4-218ENST00000574964 MCMDC2Q4G0Z9 681 aa17.43■□□□□ 0.38
NPLOC4-218ENST00000574964 CWC27Q6UX04 472 aaKnown RBP17.43■□□□□ 0.38
NPLOC4-218ENST00000574964 MAPKAPK5Q8IW41 473 aa17.43■□□□□ 0.38
NPLOC4-218ENST00000574964 FAM151AQ8WW52 585 aa17.43■□□□□ 0.38
NPLOC4-218ENST00000574964 DDRGK1Q96HY6 314 aa17.43■□□□□ 0.38
NPLOC4-218ENST00000574964 SEC62Q99442 399 aaKnown RBP17.43■□□□□ 0.38
NPLOC4-218ENST00000574964 ZNF408Q9H9D4 720 aa17.43■□□□□ 0.38
NPLOC4-218ENST00000574964 SLC4A4Q9Y6R1 1079 aa17.43■□□□□ 0.38
NPLOC4-218ENST00000574964 M0R2C6 588 aa17.42■□□□□ 0.38
NPLOC4-218ENST00000574964 TRAF5O00463 557 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms