RNA–Protein interactions for RNA: ENST00000566833.1

CCNDBP1-209, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-209ENST00000566833 GGA3Q9NZ52 723 aa16.3■□□□□ 0.2
CCNDBP1-209ENST00000566833 AK9Q5TCS8 1911 aa16.29■□□□□ 0.2
CCNDBP1-209ENST00000566833 CLRN2A0PK11 232 aa16.29■□□□□ 0.2
CCNDBP1-209ENST00000566833 POTEIP0CG38 1075 aa16.29■□□□□ 0.2
CCNDBP1-209ENST00000566833 POTEJP0CG39 1038 aa16.29■□□□□ 0.2
CCNDBP1-209ENST00000566833 ADD2P35612 726 aa16.29■□□□□ 0.2
CCNDBP1-209ENST00000566833 APOBEC3HQ6NTF7 200 aaKnown RBP16.29■□□□□ 0.2
CCNDBP1-209ENST00000566833 APOBEC3FQ8IUX4 373 aaKnown RBP16.29■□□□□ 0.2
CCNDBP1-209ENST00000566833 ZNF384Q8TF68 577 aa16.29■□□□□ 0.2
CCNDBP1-209ENST00000566833 ZBED3Q96IU2 234 aaPredicted RBP16.29■□□□□ 0.2
CCNDBP1-209ENST00000566833 USP40Q9NVE5 1235 aa16.29■□□□□ 0.2
CCNDBP1-209ENST00000566833 AATFQ9NY61 560 aaKnown RBP eCLIP16.29■□□□□ 0.2
CCNDBP1-209ENST00000566833 ECM29Q5VYK3 1845 aa16.29■□□□□ 0.2
CCNDBP1-209ENST00000566833 GPR75-ASB3A0A0A6YYF3 556 aa16.28■□□□□ 0.2
CCNDBP1-209ENST00000566833 RNF113AO15541 343 aaKnown RBP16.28■□□□□ 0.2
CCNDBP1-209ENST00000566833 TOMM70O94826 608 aa16.28■□□□□ 0.2
CCNDBP1-209ENST00000566833 PLCG2P16885 1265 aa16.28■□□□□ 0.2
CCNDBP1-209ENST00000566833 UBE3CQ15386 1083 aa16.28■□□□□ 0.2
CCNDBP1-209ENST00000566833 CHADLQ6NUI6 762 aa16.28■□□□□ 0.2
CCNDBP1-209ENST00000566833 CERS3Q8IU89 383 aa16.28■□□□□ 0.2
CCNDBP1-209ENST00000566833 SULF1Q8IWU6 871 aa16.28■□□□□ 0.2
CCNDBP1-209ENST00000566833 MIGA1Q8NAN2 632 aa16.28■□□□□ 0.2
CCNDBP1-209ENST00000566833 ZNF70Q9UC06 446 aaPredicted RBP16.28■□□□□ 0.2
CCNDBP1-209ENST00000566833 ASTN2O75129 1339 aaPredicted RBP16.27■□□□□ 0.2
CCNDBP1-209ENST00000566833 PITPNM2Q9BZ72 1349 aa16.27■□□□□ 0.2
CCNDBP1-209ENST00000566833 MAGEB6P1A0A0J9YX57 407 aa16.27■□□□□ 0.2
CCNDBP1-209ENST00000566833 GSPT1P15170 499 aaKnown RBP16.27■□□□□ 0.2
CCNDBP1-209ENST00000566833 TNNI2P48788 182 aa16.27■□□□□ 0.2
CCNDBP1-209ENST00000566833 TNFAIP1Q13829 316 aa16.27■□□□□ 0.2
CCNDBP1-209ENST00000566833 SPDYE2Q495Y8 402 aa16.27■□□□□ 0.2
CCNDBP1-209ENST00000566833 MAP1SQ66K74 1059 aaPredicted RBP16.27■□□□□ 0.2
CCNDBP1-209ENST00000566833 CDC42EP5Q6NZY7 148 aa16.27■□□□□ 0.2
CCNDBP1-209ENST00000566833 SMC1BQ8NDV3 1235 aa16.27■□□□□ 0.2
CCNDBP1-209ENST00000566833 HIP1O00291 1037 aa16.26■□□□□ 0.19
CCNDBP1-209ENST00000566833 SDSP20132 328 aa16.26■□□□□ 0.19
CCNDBP1-209ENST00000566833 ADGRA1Q86SQ6 560 aa16.26■□□□□ 0.19
CCNDBP1-209ENST00000566833 TICAM2Q86XR7 235 aa16.26■□□□□ 0.19
CCNDBP1-209ENST00000566833 TEX11Q8IYF3 940 aa16.26■□□□□ 0.19
CCNDBP1-209ENST00000566833 RBM46Q8TBY0 533 aaKnown RBP16.26■□□□□ 0.19
CCNDBP1-209ENST00000566833 APPBP2Q92624 585 aa16.26■□□□□ 0.19
CCNDBP1-209ENST00000566833 AIDAQ96BJ3 306 aa16.26■□□□□ 0.19
CCNDBP1-209ENST00000566833 DIAPH3Q9NSV4 1193 aa16.26■□□□□ 0.19
CCNDBP1-209ENST00000566833 PGAP2Q9UHJ9 254 aa16.26■□□□□ 0.19
CCNDBP1-209ENST00000566833 RFX7Q2KHR2 1363 aa16.26■□□□□ 0.19
CCNDBP1-209ENST00000566833 TCRBV5S4A2TA0A5A2 114 aa16.25■□□□□ 0.19
CCNDBP1-209ENST00000566833 TCP10L2B9ZVM9 353 aa16.25■□□□□ 0.19
CCNDBP1-209ENST00000566833 CACNB3P54284 484 aa16.25■□□□□ 0.19
CCNDBP1-209ENST00000566833 PPP4CP60510 307 aa16.25■□□□□ 0.19
CCNDBP1-209ENST00000566833 DYNLL1P63167 89 aaKnown RBP16.25■□□□□ 0.19
CCNDBP1-209ENST00000566833 CDC37L1Q7L3B6 337 aa16.25■□□□□ 0.19
CCNDBP1-209ENST00000566833 KRT26Q7Z3Y9 468 aa16.25■□□□□ 0.19
CCNDBP1-209ENST00000566833 PICALMQ13492 652 aa16.24■□□□□ 0.19
CCNDBP1-209ENST00000566833 SLFNL1Q499Z3 407 aa16.24■□□□□ 0.19
CCNDBP1-209ENST00000566833 USP48Q86UV5 1035 aa16.24■□□□□ 0.19
CCNDBP1-209ENST00000566833 SH3RF3Q8TEJ3 882 aaPredicted RBP16.24■□□□□ 0.19
CCNDBP1-209ENST00000566833 CRNKL1Q9BZJ0 848 aaKnown RBP16.24■□□□□ 0.19
CCNDBP1-209ENST00000566833 ADM5C9JUS6 153 aa16.23■□□□□ 0.19
CCNDBP1-209ENST00000566833 MBD4O95243 580 aa16.23■□□□□ 0.19
CCNDBP1-209ENST00000566833 CHGBP05060 677 aa16.23■□□□□ 0.19
CCNDBP1-209ENST00000566833 USP5P45974 858 aa16.23■□□□□ 0.19
CCNDBP1-209ENST00000566833 BMP2KLQ5H9B9 411 aa16.23■□□□□ 0.19
CCNDBP1-209ENST00000566833 FKBP1CQ5VVH2 108 aa16.23■□□□□ 0.19
CCNDBP1-209ENST00000566833 GLIS2Q9BZE0 524 aaPredicted RBP16.23■□□□□ 0.19
CCNDBP1-209ENST00000566833 ARMT1Q9H993 441 aa16.23■□□□□ 0.19
CCNDBP1-209ENST00000566833 SCAF8Q9UPN6 1271 aaKnown RBP16.23■□□□□ 0.19
CCNDBP1-209ENST00000566833 POLR2AP24928 1970 aaKnown RBP16.23■□□□□ 0.19
CCNDBP1-209ENST00000566833 RHBDL3P58872 404 aa16.22■□□□□ 0.19
CCNDBP1-209ENST00000566833 FSTL1Q12841 308 aa16.22■□□□□ 0.19
CCNDBP1-209ENST00000566833 RASA3Q14644 834 aa16.22■□□□□ 0.19
CCNDBP1-209ENST00000566833 ZMYM1Q5SVZ6 1142 aa16.22■□□□□ 0.19
CCNDBP1-209ENST00000566833 FAM83AQ86UY5 434 aa16.22■□□□□ 0.19
CCNDBP1-209ENST00000566833 LCORLQ8N3X6 602 aa16.22■□□□□ 0.19
CCNDBP1-209ENST00000566833 RIOK1Q9BRS2 568 aaKnown RBP16.22■□□□□ 0.19
CCNDBP1-209ENST00000566833 PUS7LQ9H0K6 701 aaKnown RBP16.22■□□□□ 0.19
CCNDBP1-209ENST00000566833 DEFB129Q9H1M3 183 aa16.22■□□□□ 0.19
CCNDBP1-209ENST00000566833 PPP2R3BQ9Y5P8 575 aa16.22■□□□□ 0.19
CCNDBP1-209ENST00000566833 TCP10Q12799 353 aa16.21■□□□□ 0.19
CCNDBP1-209ENST00000566833 NFIAQ12857 509 aa16.21■□□□□ 0.19
CCNDBP1-209ENST00000566833 NMIQ13287 307 aaPredicted RBP16.21■□□□□ 0.19
CCNDBP1-209ENST00000566833 ZSCAN29Q8IWY8 852 aaPredicted RBP16.21■□□□□ 0.19
CCNDBP1-209ENST00000566833 TGFBRAP1Q8WUH2 860 aa16.21■□□□□ 0.19
CCNDBP1-209ENST00000566833 OSBP2Q969R2 916 aa16.21■□□□□ 0.19
CCNDBP1-209ENST00000566833 DDRGK1Q96HY6 314 aa16.21■□□□□ 0.19
CCNDBP1-209ENST00000566833 IDI2Q9BXS1 227 aa16.21■□□□□ 0.19
CCNDBP1-209ENST00000566833 HELLSQ9NRZ9 838 aa16.21■□□□□ 0.19
CCNDBP1-209ENST00000566833 M0R2C6 588 aa16.2■□□□□ 0.18
CCNDBP1-209ENST00000566833 GPAA1O43292 621 aa16.2■□□□□ 0.18
CCNDBP1-209ENST00000566833 ENTPD3O75355 529 aa16.2■□□□□ 0.18
CCNDBP1-209ENST00000566833 WDHD1O75717 1129 aaPredicted RBP16.2■□□□□ 0.18
CCNDBP1-209ENST00000566833 NF2P35240 595 aa16.2■□□□□ 0.18
CCNDBP1-209ENST00000566833 CWC27Q6UX04 472 aaKnown RBP16.2■□□□□ 0.18
CCNDBP1-209ENST00000566833 MAPKAPK5Q8IW41 473 aa16.2■□□□□ 0.18
CCNDBP1-209ENST00000566833 FAM151AQ8WW52 585 aa16.2■□□□□ 0.18
CCNDBP1-209ENST00000566833 RUFY2Q8WXA3 655 aa16.2■□□□□ 0.18
CCNDBP1-209ENST00000566833 FAM227BQ96M60 508 aa16.2■□□□□ 0.18
CCNDBP1-209ENST00000566833 SEC62Q99442 399 aaKnown RBP16.2■□□□□ 0.18
CCNDBP1-209ENST00000566833 ZNF408Q9H9D4 720 aa16.2■□□□□ 0.18
CCNDBP1-209ENST00000566833 SLC4A4Q9Y6R1 1079 aa16.2■□□□□ 0.18
CCNDBP1-209ENST00000566833 A0A0D9SFI3 127 aa16.19■□□□□ 0.18
CCNDBP1-209ENST00000566833 TRAF5O00463 557 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms