RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 GPR75-ASB3A0A0A6YYF3 556 aa31.74■■■□□ 2.67
NME3-209ENST00000566600 CDC42EP5Q6NZY7 148 aa31.74■■■□□ 2.67
NME3-209ENST00000566600 LNPKQ9C0E8 428 aa31.74■■■□□ 2.67
NME3-209ENST00000566600 ZNF408Q9H9D4 720 aa31.74■■■□□ 2.67
NME3-209ENST00000566600 USP40Q9NVE5 1235 aa31.74■■■□□ 2.67
NME3-209ENST00000566600 SCAF8Q9UPN6 1271 aaKnown RBP31.74■■■□□ 2.67
NME3-209ENST00000566600 DOCK2Q92608 1830 aa31.73■■■□□ 2.67
NME3-209ENST00000566600 MAP4K4O95819 1239 aaPredicted RBP31.73■■■□□ 2.67
NME3-209ENST00000566600 NF2P35240 595 aa31.73■■■□□ 2.67
NME3-209ENST00000566600 BTDP43251 543 aa31.73■■■□□ 2.67
NME3-209ENST00000566600 CST9Q5W186 159 aa31.73■■■□□ 2.67
NME3-209ENST00000566600 DLK2Q6UY11 383 aa31.73■■■□□ 2.67
NME3-209ENST00000566600 OTUD7AQ8TE49 926 aaPredicted RBP31.73■■■□□ 2.67
NME3-209ENST00000566600 TCP10L2B9ZVM9 353 aa31.72■■■□□ 2.67
NME3-209ENST00000566600 GLRX3O76003 335 aaKnown RBP31.72■■■□□ 2.67
NME3-209ENST00000566600 RASA3Q14644 834 aa31.72■■■□□ 2.67
NME3-209ENST00000566600 SALL3Q9BXA9 1300 aa31.72■■■□□ 2.67
NME3-209ENST00000566600 MYO5AQ9Y4I1 1855 aaKnown RBP31.72■■■□□ 2.67
NME3-209ENST00000566600 BAG3O95817 575 aa31.71■■■□□ 2.67
NME3-209ENST00000566600 FAM83AQ86UY5 434 aa31.71■■■□□ 2.67
NME3-209ENST00000566600 STAP2Q9UGK3 403 aa31.71■■■□□ 2.67
NME3-209ENST00000566600 CYP7A1P22680 504 aa31.7■■■□□ 2.67
NME3-209ENST00000566600 TSHZ3Q63HK5 1081 aa31.7■■■□□ 2.67
NME3-209ENST00000566600 MAGEB6Q8N7X4 407 aa31.7■■■□□ 2.67
NME3-209ENST00000566600 DDX24Q9GZR7 859 aaKnown RBP eCLIP31.7■■■□□ 2.675e-32■■■■□ 24.1
NME3-209ENST00000566600 CACNB3P54284 484 aa31.69■■■□□ 2.66
NME3-209ENST00000566600 SUPT20HL1Q3ZLR7 823 aa31.69■■■□□ 2.66
NME3-209ENST00000566600 C2orf69Q8N8R5 385 aa31.69■■■□□ 2.66
NME3-209ENST00000566600 PI4K2BQ8TCG2 481 aa31.69■■■□□ 2.66
NME3-209ENST00000566600 PLCG2P16885 1265 aa31.68■■■□□ 2.66
NME3-209ENST00000566600 SLC9C2Q5TAH2 1124 aa31.68■■■□□ 2.66
NME3-209ENST00000566600 PRAMEF18Q5VWM3 479 aa31.68■■■□□ 2.66
NME3-209ENST00000566600 CERS3Q8IU89 383 aa31.68■■■□□ 2.66
NME3-209ENST00000566600 EDC3Q96F86 508 aaKnown RBP31.68■■■□□ 2.66
NME3-209ENST00000566600 GBA2Q9HCG7 927 aaPredicted RBP31.68■■■□□ 2.66
NME3-209ENST00000566600 PDE1AP54750 535 aa31.67■■■□□ 2.66
NME3-209ENST00000566600 PPP4CP60510 307 aa31.67■■■□□ 2.66
NME3-209ENST00000566600 FKBP1BP68106 108 aa31.67■■■□□ 2.66
NME3-209ENST00000566600 IDI2Q9BXS1 227 aa31.67■■■□□ 2.66
NME3-209ENST00000566600 ABT1Q9ULW3 272 aaKnown RBP31.67■■■□□ 2.66
NME3-209ENST00000566600 PDE6AP16499 860 aa31.66■■■□□ 2.66
NME3-209ENST00000566600 ZSCAN25Q6NSZ9 544 aa31.66■■■□□ 2.66
NME3-209ENST00000566600 CNTNAP1P78357 1384 aa31.66■■■□□ 2.66
NME3-209ENST00000566600 RHBDL3P58872 404 aa31.65■■■□□ 2.66
NME3-209ENST00000566600 FAM151AQ8WW52 585 aa31.65■■■□□ 2.66
NME3-209ENST00000566600 AATFQ9NY61 560 aaKnown RBP eCLIP31.65■■■□□ 2.66
NME3-209ENST00000566600 TLL2Q9Y6L7 1015 aa31.65■■■□□ 2.66
NME3-209ENST00000566600 ENTPD3O75355 529 aa31.64■■■□□ 2.66
NME3-209ENST00000566600 ADGRA1Q86SQ6 560 aa31.64■■■□□ 2.66
NME3-209ENST00000566600 HOOK2Q96ED9 719 aa31.64■■■□□ 2.66
NME3-209ENST00000566600 TMEM39BQ9GZU3 492 aa31.64■■■□□ 2.66
NME3-209ENST00000566600 HTRA3P83110 453 aa31.63■■■□□ 2.65
NME3-209ENST00000566600 NFIAQ12857 509 aa31.63■■■□□ 2.65
NME3-209ENST00000566600 KBTBD3Q8NAB2 608 aa31.63■■■□□ 2.65
NME3-209ENST00000566600 RPAP1Q9BWH6 1393 aaPredicted RBP31.63■■■□□ 2.65
NME3-209ENST00000566600 NPM3O75607 178 aaKnown RBP31.62■■■□□ 2.65
NME3-209ENST00000566600 LRRFIP1Q32MZ4 808 aaKnown RBP31.62■■■□□ 2.65
NME3-209ENST00000566600 NBPF12Q5TAG4 269 aaPredicted RBP31.62■■■□□ 2.65
NME3-209ENST00000566600 SAPCD2Q86UD0 394 aa31.62■■■□□ 2.65
NME3-209ENST00000566600 TEPSINQ96N21 525 aa31.62■■■□□ 2.65
NME3-209ENST00000566600 FAM198AQ9UFP1 575 aa31.62■■■□□ 2.65
NME3-209ENST00000566600 PAPPA2Q9BXP8 1791 aa31.61■■■□□ 2.65
NME3-209ENST00000566600 RFX7Q2KHR2 1363 aa31.61■■■□□ 2.65
NME3-209ENST00000566600 ZNF532Q9HCE3 1301 aa31.61■■■□□ 2.65
NME3-209ENST00000566600 WDHD1O75717 1129 aaPredicted RBP31.61■■■□□ 2.65
NME3-209ENST00000566600 RGS3P49796 1198 aa31.61■■■□□ 2.65
NME3-209ENST00000566600 TTLL12Q14166 644 aaPredicted RBP31.61■■■□□ 2.65
NME3-209ENST00000566600 TEX11Q8IYF3 940 aa31.61■■■□□ 2.65
NME3-209ENST00000566600 RASSF10A6NK89 507 aa31.6■■■□□ 2.65
NME3-209ENST00000566600 PPP1R12BO60237 982 aaPredicted RBP31.6■■■□□ 2.65
NME3-209ENST00000566600 ADD2P35612 726 aa31.6■■■□□ 2.65
NME3-209ENST00000566600 TCP10Q12799 353 aa31.6■■■□□ 2.65
NME3-209ENST00000566600 UBE3CQ15386 1083 aa31.6■■■□□ 2.65
NME3-209ENST00000566600 ERICH6BQ5W0A0 696 aa31.6■■■□□ 2.65
NME3-209ENST00000566600 PLEKHM2Q8IWE5 1019 aa31.6■■■□□ 2.65
NME3-209ENST00000566600 SH3RF3Q8TEJ3 882 aaPredicted RBP31.6■■■□□ 2.65
NME3-209ENST00000566600 HHIPL1Q96JK4 782 aa31.6■■■□□ 2.65
NME3-209ENST00000566600 OSBPL3Q9H4L5 887 aa31.6■■■□□ 2.65
NME3-209ENST00000566600 TCRBV5S4A2TA0A5A2 114 aa31.59■■■□□ 2.65
NME3-209ENST00000566600 HUNKP57058 714 aa31.59■■■□□ 2.65
NME3-209ENST00000566600 DEFB115Q30KQ5 88 aa31.59■■■□□ 2.65
NME3-209ENST00000566600 CENPQQ7L2Z9 268 aaPredicted RBP31.59■■■□□ 2.65
NME3-209ENST00000566600 ARMC9Q7Z3E5 817 aa31.59■■■□□ 2.65
NME3-209ENST00000566600 MIGA1Q8NAN2 632 aa31.59■■■□□ 2.65
NME3-209ENST00000566600 MYH7P12883 1935 aa31.58■■■□□ 2.65
NME3-209ENST00000566600 PICALMQ13492 652 aa31.58■■■□□ 2.65
NME3-209ENST00000566600 MAGEB6P1A0A0J9YX57 407 aa31.57■■■□□ 2.64
NME3-209ENST00000566600 ZFYP08048 801 aaPredicted RBP31.57■■■□□ 2.64
NME3-209ENST00000566600 CCDC136Q96JN2 1154 aa31.57■■■□□ 2.64
NME3-209ENST00000566600 DYNLL1P63167 89 aaKnown RBP31.56■■■□□ 2.64
NME3-209ENST00000566600 EVI5LQ96CN4 794 aa31.56■■■□□ 2.64
NME3-209ENST00000566600 SSC5DA1L4H1 1573 aa31.56■■■□□ 2.64
NME3-209ENST00000566600 FSD1Q9BTV5 496 aa31.55■■■□□ 2.64
NME3-209ENST00000566600 DDX4Q9NQI0 724 aaKnown RBP31.55■■■□□ 2.64
NME3-209ENST00000566600 MKRN1Q9UHC7 482 aaKnown RBP31.55■■■□□ 2.64
NME3-209ENST00000566600 RNF113AO15541 343 aaKnown RBP31.54■■■□□ 2.64
NME3-209ENST00000566600 PRKG1Q13976 671 aa31.54■■■□□ 2.64
NME3-209ENST00000566600 MAP3K11Q16584 847 aa31.54■■■□□ 2.64
NME3-209ENST00000566600 DCAF15Q66K64 600 aa31.54■■■□□ 2.64
NME3-209ENST00000566600 ZSCAN29Q8IWY8 852 aaPredicted RBP31.54■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms