RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 BMP6P22004 513 aa8.12□□□□□ -1.11
USP8-218ENST00000561330 PREPP48147 710 aa8.12□□□□□ -1.11
USP8-218ENST00000561330 SOX4Q06945 474 aaPredicted RBP8.12□□□□□ -1.11
USP8-218ENST00000561330 MRPL58Q14197 206 aaKnown RBP8.12□□□□□ -1.11
USP8-218ENST00000561330 AKAP4Q5JQC9 854 aa8.12□□□□□ -1.11
USP8-218ENST00000561330 PCNX4Q63HM2 1172 aa8.12□□□□□ -1.11
USP8-218ENST00000561330 UTP4Q969X6 686 aaKnown RBP8.12□□□□□ -1.11
USP8-218ENST00000561330 SLFN14P0C7P3 912 aa8.11□□□□□ -1.11
USP8-218ENST00000561330 DRD2P14416 443 aa8.11□□□□□ -1.11
USP8-218ENST00000561330 MAP1SQ66K74 1059 aaPredicted RBP8.11□□□□□ -1.11
USP8-218ENST00000561330 LLGL2Q6P1M3 1020 aa8.11□□□□□ -1.11
USP8-218ENST00000561330 GRIN3AQ8TCU5 1115 aa8.11□□□□□ -1.11
USP8-218ENST00000561330 WDR18Q9BV38 432 aa8.11□□□□□ -1.11
USP8-218ENST00000561330 NOC4LQ9BVI4 516 aaKnown RBP8.11□□□□□ -1.11
USP8-218ENST00000561330 CYP8B1Q9UNU6 501 aa8.11□□□□□ -1.11
USP8-218ENST00000561330 SYNGAP1Q96PV0 1343 aa8.1□□□□□ -1.11
USP8-218ENST00000561330 DHX15O43143 795 aaKnown RBP8.1□□□□□ -1.11
USP8-218ENST00000561330 FURINP09958 794 aa8.1□□□□□ -1.11
USP8-218ENST00000561330 H2AFB1P0C5Y9 115 aa8.1□□□□□ -1.11
USP8-218ENST00000561330 H2AFB2P0C5Z0 115 aa8.1□□□□□ -1.11
USP8-218ENST00000561330 ADH5P11766 374 aa8.1□□□□□ -1.11
USP8-218ENST00000561330 RLBP1P12271 317 aa8.1□□□□□ -1.11
USP8-218ENST00000561330 ZNF252P-AS1Q0IIN9 211 aa8.1□□□□□ -1.11
USP8-218ENST00000561330 TTBK2Q6IQ55 1244 aa8.1□□□□□ -1.11
USP8-218ENST00000561330 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.1□□□□□ -1.11
USP8-218ENST00000561330 ARMC10Q8N2F6 343 aa8.1□□□□□ -1.11
USP8-218ENST00000561330 ZNF862O60290 1169 aa8.09□□□□□ -1.11
USP8-218ENST00000561330 LMNB1P20700 586 aa8.09□□□□□ -1.11
USP8-218ENST00000561330 MAP3K11Q16584 847 aa8.09□□□□□ -1.11
USP8-218ENST00000561330 RSPO4Q2I0M5 234 aaPredicted RBP8.09□□□□□ -1.11
USP8-218ENST00000561330 KIF4BQ2VIQ3 1234 aa8.09□□□□□ -1.11
USP8-218ENST00000561330 NKAPLQ5M9Q1 402 aa8.09□□□□□ -1.11
USP8-218ENST00000561330 WDR89Q96FK6 387 aaPredicted RBP8.09□□□□□ -1.11
USP8-218ENST00000561330 ACSBG1Q96GR2 724 aa8.09□□□□□ -1.11
USP8-218ENST00000561330 MYRFLQ96LU7 910 aa8.09□□□□□ -1.11
USP8-218ENST00000561330 AP4E1Q9UPM8 1137 aa8.09□□□□□ -1.11
USP8-218ENST00000561330 TRIM37O94972 964 aa8.08□□□□□ -1.12
USP8-218ENST00000561330 BMP3P12645 472 aa8.08□□□□□ -1.12
USP8-218ENST00000561330 LIG3P49916 1009 aa8.08□□□□□ -1.12
USP8-218ENST00000561330 USP11P51784 963 aa8.08□□□□□ -1.12
USP8-218ENST00000561330 RASIP1Q5U651 963 aa8.08□□□□□ -1.12
USP8-218ENST00000561330 SCARA3Q6AZY7 606 aa8.08□□□□□ -1.12
USP8-218ENST00000561330 DYMQ7RTS9 669 aa8.08□□□□□ -1.12
USP8-218ENST00000561330 FAM20CQ8IXL6 584 aa8.08□□□□□ -1.12
USP8-218ENST00000561330 C2CD4AQ8NCU7 369 aaPredicted RBP8.08□□□□□ -1.12
USP8-218ENST00000561330 HIF3AQ9Y2N7 669 aa8.08□□□□□ -1.12
USP8-218ENST00000561330 RPS26P62854 115 aaKnown RBP8.07□□□□□ -1.12
USP8-218ENST00000561330 ID3Q02535 119 aa8.07□□□□□ -1.12
USP8-218ENST00000561330 MPRIPQ6WCQ1 1025 aa8.07□□□□□ -1.12
USP8-218ENST00000561330 PRR23CQ6ZRP0 262 aa8.07□□□□□ -1.12
USP8-218ENST00000561330 GPBAR1Q8TDU6 330 aa8.07□□□□□ -1.12
USP8-218ENST00000561330 PPP1R9AQ9ULJ8 1098 aa8.07□□□□□ -1.12
USP8-218ENST00000561330 DYRK3O43781 588 aa8.06□□□□□ -1.12
USP8-218ENST00000561330 RXRBP28702 533 aa8.06□□□□□ -1.12
USP8-218ENST00000561330 ASPAP45381 313 aa8.06□□□□□ -1.12
USP8-218ENST00000561330 KCNF1Q9H3M0 494 aa8.06□□□□□ -1.12
USP8-218ENST00000561330 SEMA6BQ9H3T3 888 aa8.06□□□□□ -1.12
USP8-218ENST00000561330 CACNA2D2Q9NY47 1150 aa8.06□□□□□ -1.12
USP8-218ENST00000561330 STOML1Q9UBI4 398 aa8.06□□□□□ -1.12
USP8-218ENST00000561330 RAXQ9Y2V3 346 aa8.06□□□□□ -1.12
USP8-218ENST00000561330 ACTL7BQ9Y614 415 aa8.06□□□□□ -1.12
USP8-218ENST00000561330 TMPRSS2O15393 492 aa8.05□□□□□ -1.12
USP8-218ENST00000561330 MAP4P27816 1152 aaKnown RBP8.05□□□□□ -1.12
USP8-218ENST00000561330 SGO2Q562F6 1265 aa8.05□□□□□ -1.12
USP8-218ENST00000561330 AGMOQ6ZNB7 445 aa8.05□□□□□ -1.12
USP8-218ENST00000561330 TMEM87AQ8NBN3 555 aa8.05□□□□□ -1.12
USP8-218ENST00000561330 YIPF2Q9BWQ6 316 aa8.05□□□□□ -1.12
USP8-218ENST00000561330 BACH2Q9BYV9 841 aa8.05□□□□□ -1.12
USP8-218ENST00000561330 ATXN3LQ9H3M9 355 aa8.05□□□□□ -1.12
USP8-218ENST00000561330 CRIM1Q9NZV1 1036 aa8.05□□□□□ -1.12
USP8-218ENST00000561330 LOC100996750A0A140TA64 210 aa8.04□□□□□ -1.12
USP8-218ENST00000561330 K7ELQ4 463 aaPredicted RBP8.04□□□□□ -1.12
USP8-218ENST00000561330 VAMP1P23763 118 aa8.04□□□□□ -1.12
USP8-218ENST00000561330 ZC3H12AQ5D1E8 599 aaKnown RBP8.04□□□□□ -1.12
USP8-218ENST00000561330 BEND4Q6ZU67 534 aa8.04□□□□□ -1.12
USP8-218ENST00000561330 CLEC10AQ8IUN9 316 aa8.04□□□□□ -1.12
USP8-218ENST00000561330 RELL1Q8IUW5 271 aa8.04□□□□□ -1.12
USP8-218ENST00000561330 PHC3Q8NDX5 983 aa8.04□□□□□ -1.12
USP8-218ENST00000561330 MRRFQ96E11 262 aaKnown RBP8.04□□□□□ -1.12
USP8-218ENST00000561330 KRTAP4-6Q9BYQ5 205 aa8.04□□□□□ -1.12
USP8-218ENST00000561330 FAM105AQ9NUU6 356 aa8.04□□□□□ -1.12
USP8-218ENST00000561330 PCDHA4Q9UN74 947 aa8.04□□□□□ -1.12
USP8-218ENST00000561330 PCDHGC5Q9Y5F6 944 aa8.04□□□□□ -1.12
USP8-218ENST00000561330 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.03□□□□□ -1.12
USP8-218ENST00000561330 RAB6AP20340 208 aa8.03□□□□□ -1.12
USP8-218ENST00000561330 PWP1Q13610 501 aa8.03□□□□□ -1.12
USP8-218ENST00000561330 TSNAXIP1Q2TAA8 658 aa8.03□□□□□ -1.12
USP8-218ENST00000561330 CDPF1Q6NVV7 123 aa8.03□□□□□ -1.12
USP8-218ENST00000561330 FBLIM1Q8WUP2 373 aa8.03□□□□□ -1.12
USP8-218ENST00000561330 FANCD2OSQ96PS1 177 aa8.03□□□□□ -1.12
USP8-218ENST00000561330 FAM83CQ9BQN1 747 aa8.03□□□□□ -1.12
USP8-218ENST00000561330 RSRP1Q9BUV0 290 aa8.03□□□□□ -1.12
USP8-218ENST00000561330 MIR1-1HGQ9H1L0 117 aa8.03□□□□□ -1.12
USP8-218ENST00000561330 GSX1Q9H4S2 264 aaPredicted RBP8.03□□□□□ -1.12
USP8-218ENST00000561330 PIDD1Q9HB75 910 aa8.03□□□□□ -1.12
USP8-218ENST00000561330 TLR6Q9Y2C9 796 aa8.03□□□□□ -1.12
USP8-218ENST00000561330 PCDHB5Q9Y5E4 795 aa8.03□□□□□ -1.12
USP8-218ENST00000561330 FAM95CA0A1B0GW59 222 aa8.02□□□□□ -1.13
USP8-218ENST00000561330 F6X3S4 739 aa8.02□□□□□ -1.13
USP8-218ENST00000561330 TFE3P19532 575 aaPredicted RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms