RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 LCORLQ8N3X6 602 aa12.24□□□□□ -0.45
USP3-219ENST00000561326 ZNF384Q8TF68 577 aa12.24□□□□□ -0.45
USP3-219ENST00000561326 NEK1Q96PY6 1258 aa12.24□□□□□ -0.45
USP3-219ENST00000561326 RIOK1Q9BRS2 568 aaKnown RBP12.24□□□□□ -0.45
USP3-219ENST00000561326 ZNF277Q9NRM2 450 aaPredicted RBP12.24□□□□□ -0.45
USP3-219ENST00000561326 ATP8A2Q9NTI2 1148 aa12.24□□□□□ -0.45
USP3-219ENST00000561326 AATFQ9NY61 560 aaKnown RBP eCLIP12.24□□□□□ -0.45
USP3-219ENST00000561326 ZNRF3Q9ULT6 936 aa12.24□□□□□ -0.45
USP3-219ENST00000561326 TTF2Q9UNY4 1162 aaKnown RBP12.24□□□□□ -0.45
USP3-219ENST00000561326 MYH1P12882 1939 aa12.23□□□□□ -0.45
USP3-219ENST00000561326 CDK5RAP2Q96SN8 1893 aa12.23□□□□□ -0.45
USP3-219ENST00000561326 MYO3BQ8WXR4 1341 aa12.23□□□□□ -0.45
USP3-219ENST00000561326 LTBP3Q9NS15 1303 aa12.23□□□□□ -0.45
USP3-219ENST00000561326 GPR75-ASB3A0A0A6YYF3 556 aa12.23□□□□□ -0.45
USP3-219ENST00000561326 K7ELQ4 463 aaPredicted RBP12.23□□□□□ -0.45
USP3-219ENST00000561326 HSP90AA1P07900 732 aaKnown RBP12.23□□□□□ -0.45
USP3-219ENST00000561326 DYNLL1P63167 89 aaKnown RBP12.23□□□□□ -0.45
USP3-219ENST00000561326 HDLBPQ00341 1268 aaKnown RBP12.23□□□□□ -0.45
USP3-219ENST00000561326 ANKRD1Q15327 319 aa12.23□□□□□ -0.45
USP3-219ENST00000561326 DACT2Q5SW24 774 aa12.23□□□□□ -0.45
USP3-219ENST00000561326 HHIPL2Q6UWX4 724 aa12.23□□□□□ -0.45
USP3-219ENST00000561326 AMOTL1Q8IY63 956 aa12.23□□□□□ -0.45
USP3-219ENST00000561326 TEKT1Q969V4 418 aa12.23□□□□□ -0.45
USP3-219ENST00000561326 UPF3BQ9BZI7 483 aaKnown RBP12.23□□□□□ -0.45
USP3-219ENST00000561326 PDRG1Q9NUG6 133 aa12.23□□□□□ -0.45
USP3-219ENST00000561326 DICER1Q9UPY3 1922 aaKnown RBP12.22□□□□□ -0.45
USP3-219ENST00000561326 E7EWF7 191 aa12.22□□□□□ -0.45
USP3-219ENST00000561326 FOXP2O15409 715 aa12.22□□□□□ -0.45
USP3-219ENST00000561326 SLC3A2P08195 630 aaKnown RBP12.22□□□□□ -0.45
USP3-219ENST00000561326 USP5P45974 858 aa12.22□□□□□ -0.45
USP3-219ENST00000561326 DIXDC1Q155Q3 683 aa12.22□□□□□ -0.45
USP3-219ENST00000561326 GRIK5Q16478 980 aa12.22□□□□□ -0.45
USP3-219ENST00000561326 ADCK5Q3MIX3 580 aa12.22□□□□□ -0.45
USP3-219ENST00000561326 RALYLQ86SE5 291 aaKnown RBP12.22□□□□□ -0.45
USP3-219ENST00000561326 FHDC1Q9C0D6 1143 aaPredicted RBP12.22□□□□□ -0.45
USP3-219ENST00000561326 ALDH8A1Q9H2A2 487 aaPredicted RBP12.22□□□□□ -0.45
USP3-219ENST00000561326 ECM29Q5VYK3 1845 aa12.22□□□□□ -0.45
USP3-219ENST00000561326 F8W031 263 aaPredicted RBP12.21□□□□□ -0.45
USP3-219ENST00000561326 PRKAB2O43741 272 aa12.21□□□□□ -0.45
USP3-219ENST00000561326 RPS6KB1P23443 525 aa12.21□□□□□ -0.45
USP3-219ENST00000561326 BTDP43251 543 aa12.21□□□□□ -0.45
USP3-219ENST00000561326 MMP14P50281 582 aa12.21□□□□□ -0.45
USP3-219ENST00000561326 HAND2P61296 217 aa12.21□□□□□ -0.45
USP3-219ENST00000561326 FGD1P98174 961 aa12.21□□□□□ -0.45
USP3-219ENST00000561326 TNIP1Q15025 636 aa12.21□□□□□ -0.45
USP3-219ENST00000561326 DHX32Q7L7V1 743 aaKnown RBP12.21□□□□□ -0.45
USP3-219ENST00000561326 CERS5Q8N5B7 392 aa12.21□□□□□ -0.45
USP3-219ENST00000561326 NLGN2Q8NFZ4 835 aa12.21□□□□□ -0.45
USP3-219ENST00000561326 NCOA7Q8NI08 942 aa12.21□□□□□ -0.45
USP3-219ENST00000561326 ZSCAN31Q96LW9 406 aaPredicted RBP12.21□□□□□ -0.45
USP3-219ENST00000561326 RNF41Q9H4P4 317 aaPredicted RBP12.21□□□□□ -0.45
USP3-219ENST00000561326 CNNM2Q9H8M5 875 aa12.21□□□□□ -0.45
USP3-219ENST00000561326 KCNQ5Q9NR82 932 aa12.21□□□□□ -0.45
USP3-219ENST00000561326 HDAC9Q9UKV0 1011 aa12.21□□□□□ -0.45
USP3-219ENST00000561326 FOCADQ5VW36 1801 aa12.21□□□□□ -0.46
USP3-219ENST00000561326 GAKO14976 1311 aa12.2□□□□□ -0.46
USP3-219ENST00000561326 YDJCA8MPS7 323 aa12.2□□□□□ -0.46
USP3-219ENST00000561326 MINDY4BA8MYZ0 360 aa12.2□□□□□ -0.46
USP3-219ENST00000561326 VIL1P09327 827 aaKnown RBP12.2□□□□□ -0.46
USP3-219ENST00000561326 PCP11498 1178 aaKnown RBP12.2□□□□□ -0.46
USP3-219ENST00000561326 MCM5P33992 734 aa12.2□□□□□ -0.46
USP3-219ENST00000561326 SLC4A3P48751 1232 aa12.2□□□□□ -0.46
USP3-219ENST00000561326 MFSD6Q6ZSS7 791 aa12.2□□□□□ -0.46
USP3-219ENST00000561326 OGFOD1Q8N543 542 aa12.2□□□□□ -0.46
USP3-219ENST00000561326 SDR42E1Q8WUS8 393 aa12.2□□□□□ -0.46
USP3-219ENST00000561326 KRT23Q9C075 422 aa12.2□□□□□ -0.46
USP3-219ENST00000561326 EPB41L4AQ9HCS5 686 aaPredicted RBP12.2□□□□□ -0.46
USP3-219ENST00000561326 ANAPC4Q9UJX5 808 aa12.2□□□□□ -0.46
USP3-219ENST00000561326 SERPINA10Q9UK55 444 aa12.2□□□□□ -0.46
USP3-219ENST00000561326 LIMCH1Q9UPQ0 1083 aa12.2□□□□□ -0.46
USP3-219ENST00000561326 SBF1O95248 1867 aa12.2□□□□□ -0.46
USP3-219ENST00000561326 ZNF646O15015 1829 aaPredicted RBP12.2□□□□□ -0.46
USP3-219ENST00000561326 RAD17O75943 681 aa12.19□□□□□ -0.46
USP3-219ENST00000561326 CRKP46108 304 aa12.19□□□□□ -0.46
USP3-219ENST00000561326 SCNN1DP51172 638 aa12.19□□□□□ -0.46
USP3-219ENST00000561326 RBM5P52756 815 aaKnown RBP eCLIP12.19□□□□□ -0.46
USP3-219ENST00000561326 SBK1Q52WX2 424 aa12.19□□□□□ -0.46
USP3-219ENST00000561326 AKNAD1Q5T1N1 836 aa12.19□□□□□ -0.46
USP3-219ENST00000561326 CIAPIN1Q6FI81 312 aa12.19□□□□□ -0.46
USP3-219ENST00000561326 RSBN1LQ6PCB5 846 aaPredicted RBP12.19□□□□□ -0.46
USP3-219ENST00000561326 ARHGAP27Q6ZUM4 889 aa12.19□□□□□ -0.46
USP3-219ENST00000561326 KIAA0825Q8IV33 1275 aa12.19□□□□□ -0.46
USP3-219ENST00000561326 TEX11Q8IYF3 940 aa12.19□□□□□ -0.46
USP3-219ENST00000561326 AGBL3Q8NEM8 1001 aa12.19□□□□□ -0.46
USP3-219ENST00000561326 SH3RF3Q8TEJ3 882 aaPredicted RBP12.19□□□□□ -0.46
USP3-219ENST00000561326 CHMP4CQ96CF2 233 aa12.19□□□□□ -0.46
USP3-219ENST00000561326 ZDHHC15Q96MV8 337 aa12.19□□□□□ -0.46
USP3-219ENST00000561326 TTC14Q96N46 770 aa12.19□□□□□ -0.46
USP3-219ENST00000561326 SYT17Q9BSW7 474 aa12.19□□□□□ -0.46
USP3-219ENST00000561326 DCP1AQ9NPI6 582 aaPredicted RBP12.19□□□□□ -0.46
USP3-219ENST00000561326 ARPP21Q9UBL0 812 aaPredicted RBP12.19□□□□□ -0.46
USP3-219ENST00000561326 DAGLAQ9Y4D2 1042 aa12.19□□□□□ -0.46
USP3-219ENST00000561326 NAV1Q8NEY1 1877 aa12.19□□□□□ -0.46
USP3-219ENST00000561326 LAMB1P07942 1786 aa12.18□□□□□ -0.46
USP3-219ENST00000561326 WDR19Q8NEZ3 1342 aa12.18□□□□□ -0.46
USP3-219ENST00000561326 MYH8P13535 1937 aa12.18□□□□□ -0.46
USP3-219ENST00000561326 USP17L12C9JPN9 530 aa12.18□□□□□ -0.46
USP3-219ENST00000561326 USP17L21D6R901 530 aa12.18□□□□□ -0.46
USP3-219ENST00000561326 NFKBIEO00221 500 aa12.18□□□□□ -0.46
USP3-219ENST00000561326 PSMD14O00487 310 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms