RNA–Protein interactions for RNA: ENST00000558709.1

SCG3-203, Transcript of secretogranin III, humanhuman

TSL 2

Gene SCG3, Length 896 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-203ENST00000558709 DKK1O94907 266 aa10.62□□□□□ -0.71
SCG3-203ENST00000558709 NFIXQ14938 502 aa10.62□□□□□ -0.71
SCG3-203ENST00000558709 ZNF530Q6P9A1 599 aaPredicted RBP10.62□□□□□ -0.71
SCG3-203ENST00000558709 TRIM50Q86XT4 487 aa10.62□□□□□ -0.71
SCG3-203ENST00000558709 RHBDD1Q8TEB9 315 aa10.62□□□□□ -0.71
SCG3-203ENST00000558709 AIDAQ96BJ3 306 aa10.62□□□□□ -0.71
SCG3-203ENST00000558709 ZNF358Q9NW07 568 aa10.62□□□□□ -0.71
SCG3-203ENST00000558709 COL15A1P39059 1388 aa10.62□□□□□ -0.71
SCG3-203ENST00000558709 SOS1Q07889 1333 aaPredicted RBP10.61□□□□□ -0.71
SCG3-203ENST00000558709 PASKQ96RG2 1323 aa10.61□□□□□ -0.71
SCG3-203ENST00000558709 LBX1P52954 281 aa10.61□□□□□ -0.71
SCG3-203ENST00000558709 EPHA4P54764 986 aa10.61□□□□□ -0.71
SCG3-203ENST00000558709 C2CD5Q86YS7 1000 aa10.61□□□□□ -0.71
SCG3-203ENST00000558709 TRIM22Q8IYM9 498 aa10.61□□□□□ -0.71
SCG3-203ENST00000558709 VWA5B2Q8N398 1253 aa10.61□□□□□ -0.71
SCG3-203ENST00000558709 ZNF837Q96EG3 531 aaPredicted RBP10.61□□□□□ -0.71
SCG3-203ENST00000558709 ABHD8Q96I13 439 aa10.61□□□□□ -0.71
SCG3-203ENST00000558709 ZMYND15Q9H091 742 aa10.61□□□□□ -0.71
SCG3-203ENST00000558709 TIMMDC1Q9NPL8 285 aa10.61□□□□□ -0.71
SCG3-203ENST00000558709 POLKQ9UBT6 870 aa10.61□□□□□ -0.71
SCG3-203ENST00000558709 SIPA1L3O60292 1781 aaPredicted RBP10.61□□□□□ -0.71
SCG3-203ENST00000558709 MRC1P22897 1456 aa10.61□□□□□ -0.71
SCG3-203ENST00000558709 SERPINB2P05120 415 aa10.6□□□□□ -0.71
SCG3-203ENST00000558709 THBS1P07996 1170 aa10.6□□□□□ -0.71
SCG3-203ENST00000558709 TMEM214Q6NUQ4 689 aaKnown RBP10.6□□□□□ -0.71
SCG3-203ENST00000558709 GMCL1Q96IK5 515 aa10.6□□□□□ -0.71
SCG3-203ENST00000558709 SERTAD1Q9UHV2 236 aa10.6□□□□□ -0.71
SCG3-203ENST00000558709 USP3Q9Y6I4 520 aa10.6□□□□□ -0.71
SCG3-203ENST00000558709 LTBP1Q14766 1721 aa10.59□□□□□ -0.71
SCG3-203ENST00000558709 A6NJY4 79 aa10.59□□□□□ -0.71
SCG3-203ENST00000558709 H0YIN7 160 aa10.59□□□□□ -0.71
SCG3-203ENST00000558709 DDNO94850 711 aaPredicted RBP10.59□□□□□ -0.71
SCG3-203ENST00000558709 MTHFSP49914 203 aa10.59□□□□□ -0.71
SCG3-203ENST00000558709 ATP1A2P50993 1020 aa10.59□□□□□ -0.71
SCG3-203ENST00000558709 DBN1Q16643 649 aa10.59□□□□□ -0.71
SCG3-203ENST00000558709 PLEKHO1Q53GL0 409 aaPredicted RBP10.59□□□□□ -0.71
SCG3-203ENST00000558709 GNASQ5JWF2 1037 aa10.59□□□□□ -0.71
SCG3-203ENST00000558709 SV2AQ7L0J3 742 aa10.59□□□□□ -0.71
SCG3-203ENST00000558709 DNAJC10Q8IXB1 793 aa10.59□□□□□ -0.71
SCG3-203ENST00000558709 SIX5Q8N196 739 aa10.59□□□□□ -0.71
SCG3-203ENST00000558709 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.59□□□□□ -0.71
SCG3-203ENST00000558709 NARFQ9UHQ1 456 aa10.59□□□□□ -0.71
SCG3-203ENST00000558709 CDK2AP1O14519 115 aa10.58□□□□□ -0.72
SCG3-203ENST00000558709 C21orf2O43822 256 aa10.58□□□□□ -0.72
SCG3-203ENST00000558709 HSPA8P11142 646 aaKnown RBP10.58□□□□□ -0.72
SCG3-203ENST00000558709 TNNT2P45379 298 aaPredicted RBP10.58□□□□□ -0.72
SCG3-203ENST00000558709 FOXK2Q01167 660 aa10.58□□□□□ -0.72
SCG3-203ENST00000558709 C1orf141Q5JVX7 400 aa10.58□□□□□ -0.72
SCG3-203ENST00000558709 LARGE2Q8N3Y3 721 aa10.58□□□□□ -0.72
SCG3-203ENST00000558709 OGFOD1Q8N543 542 aa10.58□□□□□ -0.72
SCG3-203ENST00000558709 A0A1B0GTH6 734 aa10.57□□□□□ -0.72
SCG3-203ENST00000558709 CDC14CA4D256 554 aa10.57□□□□□ -0.72
SCG3-203ENST00000558709 TMEM88BA6NKF7 163 aa10.57□□□□□ -0.72
SCG3-203ENST00000558709 F11P03951 625 aa10.57□□□□□ -0.72
SCG3-203ENST00000558709 PHKA2P46019 1235 aa10.57□□□□□ -0.72
SCG3-203ENST00000558709 INSM1Q01101 510 aaPredicted RBP10.57□□□□□ -0.72
SCG3-203ENST00000558709 AMOTQ4VCS5 1084 aa10.57□□□□□ -0.72
SCG3-203ENST00000558709 RNFT1Q5M7Z0 435 aa10.57□□□□□ -0.72
SCG3-203ENST00000558709 LDHDQ86WU2 507 aa10.57□□□□□ -0.72
SCG3-203ENST00000558709 ZNF622Q969S3 477 aaKnown RBP eCLIP10.57□□□□□ -0.72
SCG3-203ENST00000558709 DNAAF2Q9NVR5 837 aaKnown RBP10.57□□□□□ -0.72
SCG3-203ENST00000558709 ZBTB1Q9Y2K1 713 aa10.57□□□□□ -0.72
SCG3-203ENST00000558709 LTBP3Q9NS15 1303 aa10.57□□□□□ -0.72
SCG3-203ENST00000558709 BACH1O14867 736 aa10.56□□□□□ -0.72
SCG3-203ENST00000558709 CYP19A1P11511 503 aaPredicted RBP10.56□□□□□ -0.72
SCG3-203ENST00000558709 MLLT1Q03111 559 aaPredicted RBP10.56□□□□□ -0.72
SCG3-203ENST00000558709 CDCA8Q53HL2 280 aa10.56□□□□□ -0.72
SCG3-203ENST00000558709 CCDC102BQ68D86 513 aa10.56□□□□□ -0.72
SCG3-203ENST00000558709 BICDL1Q6ZP65 573 aa10.56□□□□□ -0.72
SCG3-203ENST00000558709 AEBP1Q8IUX7 1158 aa10.56□□□□□ -0.72
SCG3-203ENST00000558709 TPCN2Q8NHX9 752 aa10.56□□□□□ -0.72
SCG3-203ENST00000558709 GAS2L1Q99501 681 aaPredicted RBP10.56□□□□□ -0.72
SCG3-203ENST00000558709 COL25A1Q9BXS0 654 aaPredicted RBP10.56□□□□□ -0.72
SCG3-203ENST00000558709 TAOK3Q9H2K8 898 aa10.56□□□□□ -0.72
SCG3-203ENST00000558709 SCHIP1Q9P0W5 487 aaPredicted RBP10.56□□□□□ -0.72
SCG3-203ENST00000558709 IQCA1LA6NCM1 817 aa10.55□□□□□ -0.72
SCG3-203ENST00000558709 M0R2N6 131 aa10.55□□□□□ -0.72
SCG3-203ENST00000558709 GTF2E1P29083 439 aaPredicted RBP10.55□□□□□ -0.72
SCG3-203ENST00000558709 GAS6Q14393 721 aa10.55□□□□□ -0.72
SCG3-203ENST00000558709 TAF1DQ9H5J8 278 aaPredicted RBP10.55□□□□□ -0.72
SCG3-203ENST00000558709 CCDC85CA6NKD9 419 aa10.54□□□□□ -0.72
SCG3-203ENST00000558709 MSX1P28360 303 aa10.54□□□□□ -0.72
SCG3-203ENST00000558709 UBAP2LQ14157 1087 aaKnown RBP10.54□□□□□ -0.72
SCG3-203ENST00000558709 EAPPQ56P03 285 aaPredicted RBP10.54□□□□□ -0.72
SCG3-203ENST00000558709 NIFKQ9BYG3 293 aaKnown RBP10.54□□□□□ -0.72
SCG3-203ENST00000558709 AKAP11Q9UKA4 1901 aa10.54□□□□□ -0.72
SCG3-203ENST00000558709 RASSF10A6NK89 507 aa10.53□□□□□ -0.72
SCG3-203ENST00000558709 H7C1W4 665 aa10.53□□□□□ -0.72
SCG3-203ENST00000558709 ATP4AP20648 1035 aa10.53□□□□□ -0.72
SCG3-203ENST00000558709 PLA2G4AP47712 749 aa10.53□□□□□ -0.72
SCG3-203ENST00000558709 RGS19P49795 217 aa10.53□□□□□ -0.72
SCG3-203ENST00000558709 SLC39A6Q13433 755 aa10.53□□□□□ -0.72
SCG3-203ENST00000558709 TBC1D9BQ66K14 1250 aa10.53□□□□□ -0.72
SCG3-203ENST00000558709 RIPOR1Q6ZS17 1223 aa10.53□□□□□ -0.72
SCG3-203ENST00000558709 SLC52A2Q9HAB3 445 aa10.53□□□□□ -0.72
SCG3-203ENST00000558709 POLR2AP24928 1970 aaKnown RBP10.53□□□□□ -0.72
SCG3-203ENST00000558709 WDR33Q9C0J8 1336 aaKnown RBP10.53□□□□□ -0.72
SCG3-203ENST00000558709 ZNF541Q9H0D2 1346 aa10.53□□□□□ -0.72
SCG3-203ENST00000558709 CANXP27824 592 aaKnown RBP10.52□□□□□ -0.73
SCG3-203ENST00000558709 LMOD1P29536 600 aaPredicted RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms